FFCP PHASE1:Hg19::chr10:54010532..54010547,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:54010532..54010547,+ | |||
|coexpression_cluster_id=C136 | |||
|description=CAGE_peak_at_chr10:54010532..54010547,+ | |description=CAGE_peak_at_chr10:54010532..54010547,+ | ||
|id=chr10:54010532..54010547,+ | |id=chr10:54010532..54010547,+ | ||
|ontology_enrichment_celltype=CL:0000188!9.31e-12!9 | |ontology_enrichment_celltype=CL:0000188!9.31e-12!9 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050619!1.04e-07!1;DOID:1357!1.04e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000007!1.26e-14!2;UBERON:0000341!2.16e-14!2;UBERON:0003127!1.11e-13!2;UBERON:0001723!1.02e-09!3;UBERON:0001033!1.02e-09!3;UBERON:0010056!1.02e-09!3;UBERON:0002426!2.89e-08!1;UBERON:0003831!2.89e-08!1;UBERON:0003898!2.89e-08!1;UBERON:0004830!2.89e-08!1;UBERON:0001774!2.89e-08!1;UBERON:0003830!2.89e-08!1;UBERON:0005175!2.89e-08!1;UBERON:0003897!2.89e-08!1;UBERON:0001103!2.89e-08!1;UBERON:0010084!2.89e-08!1;UBERON:0002134!4.07e-08!1;UBERON:0005208!4.07e-08!1;UBERON:0005946!4.07e-08!1;UBERON:0005965!4.07e-08!1;UBERON:0002078!4.07e-08!1;UBERON:0007029!4.99e-08!1;UBERON:0001736!5.70e-08!1;UBERON:0006298!5.70e-08!1;UBERON:0003296!9.74e-08!4;UBERON:0010133!9.74e-08!4;UBERON:0001764!1.04e-07!1;UBERON:0001825!1.04e-07!1;UBERON:0002363!1.87e-07!1;UBERON:0007647!1.87e-07!1;UBERON:0010115!1.87e-07!1;UBERON:0008814!5.25e-07!15 | |ontology_enrichment_uberon=UBERON:0000007!1.26e-14!2;UBERON:0000341!2.16e-14!2;UBERON:0003127!1.11e-13!2;UBERON:0001723!1.02e-09!3;UBERON:0001033!1.02e-09!3;UBERON:0010056!1.02e-09!3;UBERON:0002426!2.89e-08!1;UBERON:0003831!2.89e-08!1;UBERON:0003898!2.89e-08!1;UBERON:0004830!2.89e-08!1;UBERON:0001774!2.89e-08!1;UBERON:0003830!2.89e-08!1;UBERON:0005175!2.89e-08!1;UBERON:0003897!2.89e-08!1;UBERON:0001103!2.89e-08!1;UBERON:0010084!2.89e-08!1;UBERON:0002134!4.07e-08!1;UBERON:0005208!4.07e-08!1;UBERON:0005946!4.07e-08!1;UBERON:0005965!4.07e-08!1;UBERON:0002078!4.07e-08!1;UBERON:0007029!4.99e-08!1;UBERON:0001736!5.70e-08!1;UBERON:0006298!5.70e-08!1;UBERON:0003296!9.74e-08!4;UBERON:0010133!9.74e-08!4;UBERON:0001764!1.04e-07!1;UBERON:0001825!1.04e-07!1;UBERON:0002363!1.87e-07!1;UBERON:0007647!1.87e-07!1;UBERON:0010115!1.87e-07!1;UBERON:0008814!5.25e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000007;7.72e-66;2!UBERON:0002426;2.58e-34;1!UBERON:0003831;2.58e-34;1!UBERON:0003898;2.58e-34;1!UBERON:0004830;2.58e-34;1!UBERON:0003830;2.58e-34;1!UBERON:0005175;2.58e-34;1!UBERON:0001774;2.58e-34;1!UBERON:0001103;2.58e-34;1!UBERON:0003296;1.38e-33;4!UBERON:0010133;1.38e-33;4!UBERON:0001894;1.04e-19;7!UBERON:0005090;6.48e-18;2!UBERON:0001630;6.48e-18;2!UBERON:0001134;2.66e-09;16!UBERON:0002036;2.66e-09;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,1.08e-65,2;UBERON:0002426,2.58e-34,1;UBERON:0003831,2.58e-34,1;UBERON:0003898,2.58e-34,1;UBERON:0004830,2.58e-34,1;UBERON:0003830,2.58e-34,1;UBERON:0005175,2.58e-34,1;UBERON:0001774,2.58e-34,1;UBERON:0001103,2.58e-34,1;UBERON:0010084,2.58e-34,1;UBERON:0003296,1.63e-33,4;UBERON:0010133,1.63e-33,4;UBERON:0001894,1.15e-19,7;UBERON:0006222,1.15e-19,7;UBERON:0005090,6.48e-18,2;UBERON:0001630,6.48e-18,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0.137836572484531,0,0,0.255679882248303,2.31483292681517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.2669161627979,0,0,0,0,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.21031058919516,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82089681270989,1.13831095675649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91244099532837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.615976841137482,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.639701945702943,0.476128862927481,0,0.0620747142958579,0,0,0.202117188958219,0.435433495793923,0.342233301085281,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0.137836572484531,0,0,0.255679882248303,2.31483292681517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.2669161627979,0,0,0,0,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.21031058919516,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82089681270989,1.13831095675649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91244099532837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.615976841137482,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.639701945702943,0.476128862927481,0,0.0620747142958579,0,0,0.202117188958219,0.435433495793923,0.342233301085281,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:54010532..54010547,+ | |short_description=p@chr10:54010532..54010547,+ | ||
}} | }} |
Latest revision as of 14:09, 23 July 2015
Short description: | p@chr10:54010532..54010547, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:54010532..54010547, + |
Coexpression cluster: | C136_Wilms_extraskeletal_anaplastic_rhabdomyosarcoma_cholangiocellular_nonsmall_neuroectodermal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pituitary gland | 1.08e-65 | 2 |
chest muscle | 2.58e-34 | 1 |
respiratory system muscle | 2.58e-34 | 1 |
skeletal muscle of trunk | 2.58e-34 | 1 |
respiratory system skeletal muscle | 2.58e-34 | 1 |
thoracic segment muscle | 2.58e-34 | 1 |
chest organ | 2.58e-34 | 1 |
muscle of trunk | 2.58e-34 | 1 |
diaphragm | 2.58e-34 | 1 |
future diaphragm | 2.58e-34 | 1 |
gland of diencephalon | 1.63e-33 | 4 |
neuroendocrine gland | 1.63e-33 | 4 |
diencephalon | 1.15e-19 | 7 |
future diencephalon | 1.15e-19 | 7 |
muscle structure | 6.48e-18 | 2 |
muscle organ | 6.48e-18 | 2 |