FFCP PHASE1:Hg19::chr10:5568036..5568049,-: Difference between revisions
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|id=chr10:5568036..5568049,-
|short_description=p2@ENST00000442008
|description=CAGE_peak_2_at_ENST00000442008_5end
|association_with_transcript=-331bp_to_ENST00000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-331bp_to_ENST00000442008_5end | |||
|cluster_id=chr10:5568036..5568049,- | |||
|description=CAGE_peak_2_at_ENST00000442008_5end | |||
|id=chr10:5568036..5568049,- | |||
|ontology_enrichment_celltype=CL:0002621!2.23e-18!3;CL:0002327!1.00e-14!4;CL:0002231!3.08e-09!3;CL:0002076!9.63e-08!43;CL:0002251!6.19e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0002327;6.15e-41;4!CL:0002231;1.93e-07;3!CL:0002621;2.79e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002327,3.33e-41,4;CL:0002231,1.93e-07,3;CL:0002621,2.97e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0009143;3.25e-19;1 | |||
|ontology_enrichment_disease=DOID:1749!1.39e-10!14;DOID:3151!1.54e-07!1;DOID:3149!1.54e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:3151;3.25e-19;1!DOID:3149;3.25e-19;1!DOID:3451;2.72e-10;2!DOID:4159;2.72e-10;2!DOID:0060122;2.72e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,3.25e-19,1;DOID:3149,3.25e-19,1;DOID:3451,2.72e-10,2;DOID:4159,2.72e-10,2;DOID:0060122,2.72e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0001949!2.23e-18!3;UBERON:0000161!1.83e-15!35;UBERON:0001911!1.00e-14!4;UBERON:0005333!1.00e-14!4;UBERON:0008425!1.00e-14!4;UBERON:0005311!1.00e-14!4;UBERON:0000166!3.45e-13!21;UBERON:0000165!1.14e-09!28;UBERON:0000930!1.14e-09!28;UBERON:0001723!5.85e-09!3;UBERON:0001033!5.85e-09!3;UBERON:0010056!5.85e-09!3;UBERON:0003102!4.22e-08!95;UBERON:0000076!1.38e-07!8;UBERON:0002372!1.85e-07!1;UBERON:0001961!1.85e-07!1;UBERON:0001744!1.85e-07!1;UBERON:0001735!1.85e-07!1;UBERON:0000996!2.52e-07!1;UBERON:0001828!3.38e-07!8;UBERON:0000989!3.41e-07!1;UBERON:0008811!3.41e-07!1;UBERON:0006258!3.41e-07!1;UBERON:0005876!3.41e-07!1;UBERON:0004874!3.41e-07!1;UBERON:0000997!3.62e-07!1;UBERON:0005056!3.62e-07!1;UBERON:0003343!5.05e-07!4;UBERON:0004785!5.05e-07!4;UBERON:0001301!5.19e-07!1;UBERON:0001882!7.40e-07!1;UBERON:0005403!7.40e-07!1;UBERON:0001444!7.67e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0001911;6.15e-41;4!UBERON:0002372;3.25e-19;1!UBERON:0001961;3.25e-19;1!UBERON:0001744;3.25e-19;1!UBERON:0001042;3.25e-19;1!UBERON:0001735;3.25e-19;1!UBERON:0006562;2.72e-10;2!UBERON:0000161;3.57e-09;19!UBERON:0000166;3.57e-09;19!UBERON:0000344;9.61e-09;20!UBERON:0001043;2.79e-07;3!UBERON:0001949;2.79e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,3.33e-41,4;UBERON:0005333,3.33e-41,4;UBERON:0008425,3.33e-41,4;UBERON:0005311,3.33e-41,4;UBERON:0000076,5.16e-21,8;UBERON:0002372,5.62e-19,1;UBERON:0001961,5.62e-19,1;UBERON:0001744,5.62e-19,1;UBERON:0001735,5.62e-19,1;UBERON:0000344,1.08e-08,20;UBERON:0000161,2.39e-08,36;UBERON:0005153,3.33e-08,37;UBERON:0000166,5.93e-08,22;UBERON:0001043,2.47e-07,3;UBERON:0009143,2.47e-07,3;UBERON:0001949,2.97e-07,3 | |||
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|short_description=p2@ENST00000442008 | |||
}} | }} |
Latest revision as of 14:13, 23 July 2015
Short description: | p2@ENST00000442008 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000442008_5end |
Coexpression cluster: | NA |
Association with transcript: | -331bp_to_ENST00000442008_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 3.33e-41 | 4 |
epithelial cell of prostate | 1.93e-07 | 3 |
gingival epithelial cell | 2.97e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mammary gland | 3.33e-41 | 4 |
mammary bud | 3.33e-41 | 4 |
mammary ridge | 3.33e-41 | 4 |
mammary placode | 3.33e-41 | 4 |
external ectoderm | 5.16e-21 | 8 |
tonsil | 5.62e-19 | 1 |
mucosa-associated lymphoid tissue | 5.62e-19 | 1 |
lymphoid tissue | 5.62e-19 | 1 |
tonsillar ring | 5.62e-19 | 1 |
mucosa | 1.08e-08 | 20 |
orifice | 2.39e-08 | 36 |
epithelial bud | 3.33e-08 | 37 |
oral opening | 5.93e-08 | 22 |
esophagus | 2.47e-07 | 3 |
esophageal region | 2.47e-07 | 3 |
gingival epithelium | 2.97e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 3.25e-19 | 1 |
keratoacanthoma | 3.25e-19 | 1 |
skin carcinoma | 2.72e-10 | 2 |
skin cancer | 2.72e-10 | 2 |
integumentary system cancer | 2.72e-10 | 2 |