FFCP PHASE1:Hg19::chr10:6779326..6779351,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:6779326..6779351,+ to FFCP PHASE1:Hg19::chr10:6779326..6779351,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000417112_5end | |||
|cluster_id=chr10:6779326..6779351,+ | |||
|coexpression_cluster_id=C3035 | |||
|description=CAGE_peak_3_at_ENST00000417112_5end | |||
|id=chr10:6779326..6779351,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.65e-37!254;CL:0002076!1.28e-12!43;CL:0000076!9.38e-09!62;CL:0002251!2.32e-08!21;CL:0002368!7.53e-08!13;CL:1000507!1.34e-07!12;CL:1000494!1.34e-07!12;CL:0000223!1.60e-07!59;CL:1000449!1.66e-07!16;CL:1000497!1.97e-07!18;CL:0002518!1.97e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:1000507;1.08e-14;10!CL:1000494;1.08e-14;10!CL:1000449;3.33e-13;15!CL:1000497;3.43e-13;17!CL:0002518;3.43e-13;17!CL:0002368;2.22e-10;13!CL:0002076;5.66e-10;42!CL:0002681;1.74e-09;12!CL:0002584;1.74e-09;12!CL:0002159;1.86e-08;14!CL:0002251;1.21e-07;20!CL:0000244;1.81e-07;4!CL:0000731;1.81e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.91e-46,253;CL:1000507,1.17e-14,10;CL:1000494,1.17e-14,10;CL:1000449,4.13e-13,15;CL:1000497,4.47e-13,17;CL:0002518,4.47e-13,17;CL:0002076,1.25e-12,42;CL:0002368,2.61e-10,13;CL:0002681,2.25e-09,12;CL:0002584,2.25e-09,12;CL:0000076,4.58e-09,63;CL:0000223,1.58e-08,58;CL:0002159,2.33e-08,14;CL:0002251,1.23e-07,20;CL:0000244,1.78e-07,4;CL:0000731,1.78e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.30e-08;29 | |||
|ontology_enrichment_disease=DOID:305!2.57e-15!106;DOID:1749!3.03e-13!14;DOID:0050687!7.19e-09!143 | |||
|ontology_enrichment_disease_v019=DOID:1749;5.30e-14;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,7.46e-18,106;DOID:1749,3.93e-14,14;DOID:0050687,2.00e-11,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!9.22e-19!169;UBERON:0000925!9.22e-19!169;UBERON:0006595!9.22e-19!169;UBERON:0001004!3.25e-16!72;UBERON:0000064!3.64e-15!219;UBERON:0001007!1.03e-12!155;UBERON:0001555!1.03e-12!155;UBERON:0007026!1.03e-12!155;UBERON:0000065!9.05e-12!53;UBERON:0000481!2.93e-11!347;UBERON:0006554!3.20e-11!44;UBERON:0005631!6.29e-11!14;UBERON:0000158!6.29e-11!14;UBERON:0001008!9.18e-11!45;UBERON:0000072!9.87e-11!46;UBERON:0008947!1.13e-10!38;UBERON:0003258!1.13e-10!38;UBERON:0000077!4.00e-10!130;UBERON:0000161!5.69e-10!35;UBERON:0003104!6.03e-10!238;UBERON:0009142!6.03e-10!238;UBERON:0001737!1.32e-09!9;UBERON:0005911!1.36e-08!82;UBERON:0000062!1.58e-08!511;UBERON:0004921!1.76e-08!129;UBERON:0004185!1.76e-08!129;UBERON:0003064!1.76e-08!37;UBERON:0006555!4.44e-08!17;UBERON:0005103!4.44e-08!17;UBERON:0000083!4.44e-08!17;UBERON:0009201!4.44e-08!17;UBERON:0004819!4.44e-08!17;UBERON:0006553!4.44e-08!17;UBERON:0003074!4.44e-08!17;UBERON:0003060!4.44e-08!17;UBERON:0005153!5.54e-08!37;UBERON:0009773!1.34e-07!12;UBERON:0001231!1.34e-07!12;UBERON:0004810!1.34e-07!12;UBERON:0000166!1.61e-07!21;UBERON:0004211!1.66e-07!16;UBERON:0001285!1.66e-07!16;UBERON:0007684!1.66e-07!16;UBERON:0003220!1.66e-07!16;UBERON:0004208!1.66e-07!16;UBERON:0004876!1.94e-07!20;UBERON:0000080!2.10e-07!18;UBERON:0002120!2.10e-07!18;UBERON:0004875!2.10e-07!18;UBERON:0005721!2.10e-07!18;UBERON:0005754!2.10e-07!18;UBERON:0007297!2.10e-07!18;UBERON:0001041!3.06e-07!98;UBERON:0000464!3.89e-07!104;UBERON:0001444!4.42e-07!48;UBERON:0000063!6.67e-07!97;UBERON:0000058!7.08e-07!26;UBERON:0000305!7.24e-07!7;UBERON:0000475!7.58e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;1.08e-14;10!UBERON:0009773;1.08e-14;10!UBERON:0001231;1.08e-14;10!UBERON:0004810;1.08e-14;10!UBERON:0001737;1.34e-14;9!UBERON:0001557;1.34e-14;9!UBERON:0006555;3.33e-13;15!UBERON:0004819;3.33e-13;15!UBERON:0001285;3.33e-13;15!UBERON:0007684;3.33e-13;15!UBERON:0000072;4.45e-12;37!UBERON:0000065;7.68e-12;44!UBERON:0006554;1.45e-11;30!UBERON:0001008;1.45e-11;30!UBERON:0001225;1.74e-09;12!UBERON:0008987;1.74e-09;12!UBERON:0001004;1.36e-08;65!UBERON:0002113;2.16e-08;24!UBERON:0011143;2.16e-08;24!UBERON:0004807;2.35e-07;22!UBERON:0001851;3.29e-07;15!UBERON:0000353;3.29e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,3.63e-15,74;UBERON:0004810,1.17e-14,10;UBERON:0001737,1.95e-14,9;UBERON:0004119,4.16e-14,160;UBERON:0000925,4.16e-14,160;UBERON:0006595,4.16e-14,160;UBERON:0006555,4.72e-14,16;UBERON:0004819,4.72e-14,16;UBERON:0000065,1.45e-13,54;UBERON:0004211,4.13e-13,15;UBERON:0009773,4.13e-13,15;UBERON:0001231,4.13e-13,15;UBERON:0001285,4.13e-13,15;UBERON:0007684,4.13e-13,15;UBERON:0004208,4.13e-13,15;UBERON:0008947,1.06e-12,38;UBERON:0003258,1.06e-12,38;UBERON:0006554,3.32e-12,47;UBERON:0001008,8.11e-12,48;UBERON:0000072,1.97e-11,47;UBERON:0001225,2.25e-09,12;UBERON:0008987,2.25e-09,12;UBERON:0002113,1.31e-08,26;UBERON:0003918,1.31e-08,26;UBERON:0011143,1.31e-08,26;UBERON:0005095,1.31e-08,26;UBERON:0007687,1.31e-08,26;UBERON:0001557,1.56e-08,19;UBERON:0001007,1.84e-08,145;UBERON:0001555,1.84e-08,145;UBERON:0007026,1.84e-08,145;UBERON:0001041,3.19e-07,87;UBERON:0001851,3.99e-07,15;UBERON:0000353,3.99e-07,15;UBERON:0005177,6.75e-07,101 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,2.21160542851358,5.58240934377942,2.18441372130172,3.4289707169699,0.37129905888014,0.331397375727916,0,0,0,0,0,0.408001382488506,0,0.286235987131057,0.547497700291537,0,0,0,0,0,0,0,5.51652734687356,2.409647350226,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567208902984407,0.665188192387692,0,0.0654895377488563,9.4716774956061,11.1235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0.151357427644931,0,0.234321431833797,0,0,0,0.469737994575059,0.485618833104395,0.561803226808994,0.204154171254893,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0.103052529238439,0,0,0,0,0,0,0,0,0,0,4.25173876959253,2.18196896472668,6.30970109855808,0,0,0,0.207322110030741,0,0.36497735907583,0,0,0,0,0,4.49565840151407,3.20310911148393,4.82022059766964,4.30146493656336,2.17879444092406,4.27087114399974,3.23595139584395,3.53198637225623,4.23221872641029,0,0,0,0,0,0,0,0,0.122988438543114,1.20097467208968,3.07300799144152,2.24803506515239,12.1640056618073,4.81459914824354,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,5.62403003920662,1.00789276919316,2.69372684760534,3.49278238541108,10.4628217865026,10.7347150166259,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0.129271715757778,0,0,0.531876233169741,1.04007436911366,0.514414748524284,0,0,0.857867961948885,0,0.823240336780769,0,0,0,0.904318131178758,0,1.19967589418468,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,1.00034104211935,0,0,0,0,0,0,0,0,0,0.553107505625109,0.347534457872331,0,0,0,0,0,1.81876542867756,9.98612637062982,1.81434175997808,0,0,0,0,0,0,0,0,0,0,0,0,0,3.60911646545913,0.828728900423067,0.229628896329213,0,0.262248829918848,4.51199612907412,3.54270550680308,3.13739907670742,5.84556898613043,1.58327443339314,0,0,1.0795795805107,0,1.08378575017541,1.50506932156456,4.84264918785573,3.3243040357149,2.0148727924996,0,0,2.3080511260475,0.656029291399411,0,0.206082023295445,0,0,0,1.30012049207304,0,0,0,0.15350367472613,0.137836572484531,0,0,0.0852266274161009,0,2.31398881505369,1.34533047155574,2.55225424989168,2.023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0.589062011728432,0.202182481573316,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,1.89736586882858,3.84928192269481,1.53955380360819,4.02181365321472,2.17781969722645,0,5.16606447205476,6.73885902670502,3.54744122829341,2.29723400206959,0,0,0,0,0,0,0,0,0,0,10.5367292871844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748562161632879,0,0,0,0,11.4597352674091,0.890894042497916,9.21482106297696,0,0.140669416410513,0.111308705022906,0,0.211125408127993,0,0,0,3.47713520507326,0,0,3.41499734359842,9.48812225780729,0,0.0986434056369336,0,0,0,0,0,0,0,0,10.468997242266,0,0.709163045303809,0,0,0,0,0.241192877250816,0,0,0,0,2.83240005149374,1.81250867562184,0,0,0,0,0,0.957003479195758,0.274792780205587,0.533034776018635,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0,0,0,0,0,0,2.40773294189637,0.468528891450678,0,4.10895699757388,0,0,0,0,0,0,0,1.32930774541437,0,0.313932918407225,0,0,0,0,4.60564267847575,7.05179573301261,1.04836000945218,0,2.51566461351621,1.90032224424082,1.72442459811739,0,0,0,0.411125773940253,0.993573058514948,0,0.977756913674015,2.56508224804908,7.47085481587734,1.39866726707491,0,0,0,3.02515075775114,6.95814199166422,7.30651507312066,4.89255141865011,3.66109962093166,0.203996435272644,0,0,0,0,0,0,0,1.3749625440701,0,0.199679000498991,1.28767814440971,0.669514372325618,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0.182248669974074,12.7465181287721,0.0788057072991982,0.0524545881349981,0,1.07572403599707,6.52511670886114,1.42939065274673,0,0,0,0,0,0,0,0,0.226624183040251,0.146552233678082,0,0,0,7.18564719114184,4.9337051562167,0,0,0,0,0,0,2.55336503108073,0,0,0,0,0,0,0,0,0,0,0.558867626472451,0,0.874862855734746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0.380805212168795,0,0,0.429642228169954,0,0,0,0,0,0,0,0,0,0.680117776536817,0.231522474323834,0,0.71635536432595,2.47041157728778,0.877136198314828,1.23682402162117,0.38582807654183,1.35153952522458,0,1.72715170865599,1.51929978088691,0,0,0,0,0,6.88164144510414,7.39592431755195,0,0,0,0,0,0.559518030877778,3.73246356019784,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0,0,0,0,0,0,2.64998839952769,4.36487976386639,3.85200056895526,0.346576998451015,0,0,0,0.225630985047772,0,0,0,1.47394725759087,2.21784129325568,0,0,0,0,0,0,1.98484471355718,0,3.32182311862948,0,0,0,0,0.177404740325278,0,0,0,0,14.774230110496,0.556157009460346,0.078493092850514,0.157115589916002,0,0,1.29556554731173,0,0,0,0,0,0,0.414432328326074,0.6828739083758,0.691259661814092,0,0,0,0,0.22910686854405,0,0,0,1.27595303699816,10.7287773984397,0,1.74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| ||
|short_description=p3@ENST00000417112 | |||
}} | }} |
Latest revision as of 14:51, 23 July 2015
Short description: | p3@ENST00000417112 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ENST00000417112_5end |
Coexpression cluster: | C3035_prostate_signet_epidermoid_Keratinocyte_giant_Mammary_mucinous |
Association with transcript: | 0bp_to_ENST00000417112_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.91e-46 | 253 |
kidney tubule cell | 1.17e-14 | 10 |
nephron tubule epithelial cell | 1.17e-14 | 10 |
epithelial cell of nephron | 4.13e-13 | 15 |
kidney cell | 4.47e-13 | 17 |
kidney epithelial cell | 4.47e-13 | 17 |
endo-epithelial cell | 1.25e-12 | 42 |
respiratory epithelial cell | 2.61e-10 | 13 |
kidney cortical cell | 2.25e-09 | 12 |
renal cortical epithelial cell | 2.25e-09 | 12 |
squamous epithelial cell | 4.58e-09 | 63 |
endodermal cell | 1.58e-08 | 58 |
general ecto-epithelial cell | 2.33e-08 | 14 |
epithelial cell of alimentary canal | 1.23e-07 | 20 |
transitional epithelial cell | 1.78e-07 | 4 |
urothelial cell | 1.78e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
respiratory system | 3.63e-15 | 74 |
nephron tubule epithelium | 1.17e-14 | 10 |
larynx | 1.95e-14 | 9 |
endoderm-derived structure | 4.16e-14 | 160 |
endoderm | 4.16e-14 | 160 |
presumptive endoderm | 4.16e-14 | 160 |
excretory tube | 4.72e-14 | 16 |
kidney epithelium | 4.72e-14 | 16 |
respiratory tract | 1.45e-13 | 54 |
nephron epithelium | 4.13e-13 | 15 |
renal tubule | 4.13e-13 | 15 |
nephron tubule | 4.13e-13 | 15 |
nephron | 4.13e-13 | 15 |
uriniferous tubule | 4.13e-13 | 15 |
nephrogenic mesenchyme | 4.13e-13 | 15 |
respiratory primordium | 1.06e-12 | 38 |
endoderm of foregut | 1.06e-12 | 38 |
urinary system structure | 3.32e-12 | 47 |
renal system | 8.11e-12 | 48 |
segment of respiratory tract | 1.97e-11 | 47 |
cortex of kidney | 2.25e-09 | 12 |
renal parenchyma | 2.25e-09 | 12 |
kidney | 1.31e-08 | 26 |
kidney mesenchyme | 1.31e-08 | 26 |
upper urinary tract | 1.31e-08 | 26 |
kidney rudiment | 1.31e-08 | 26 |
kidney field | 1.31e-08 | 26 |
upper respiratory tract | 1.56e-08 | 19 |
digestive system | 1.84e-08 | 145 |
digestive tract | 1.84e-08 | 145 |
primitive gut | 1.84e-08 | 145 |
foregut | 3.19e-07 | 87 |
cortex | 3.99e-07 | 15 |
parenchyma | 3.99e-07 | 15 |
trunk region element | 6.75e-07 | 101 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 7.46e-18 | 106 |
squamous cell carcinoma | 3.93e-14 | 14 |
cell type cancer | 2.00e-11 | 143 |