FFCP PHASE1:Hg19::chr10:6821501..6821504,+: Difference between revisions
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|id=chr10:6821501..6821504,+
|short_description=p1@uc001ijm.2
|description=CAGE_peak_1_at_uc001ijm.2_5end
|association_with_transcript=-36bp_to_uc001ijm.2_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-36bp_to_uc001ijm.2_5end | |||
|cluster_id=chr10:6821501..6821504,+ | |||
|description=CAGE_peak_1_at_uc001ijm.2_5end | |||
|id=chr10:6821501..6821504,+ | |||
|ontology_enrichment_celltype=CL:0000575!1.76e-10!2;CL:0000066!2.80e-08!254;CL:0000240!1.71e-07!6;CL:0000311!1.71e-07!6;CL:0000079!1.71e-07!6;CL:0000237!1.71e-07!6;CL:0000036!1.71e-07!6;CL:0000357!1.71e-07!6;CL:0000114!1.71e-07!6;CL:0002605!5.16e-07!3;CL:0002150!6.36e-07!3;CL:0000861!6.36e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000047;6.30e-26;2!CL:0002540;1.38e-09;6!CL:0000128;2.11e-08;7!CL:0000126;2.11e-08;7!CL:0000127;2.11e-08;7!CL:0002319;2.13e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002540,1.32e-09,6;CL:0000128,1.89e-08,7;CL:0000126,1.89e-08,7;CL:0000127,1.89e-08,7;CL:0002453,1.89e-08,7;CL:0002319,2.06e-08,25;CL:0000047,1.69e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0009847;8.69e-18;3!UBERON:0003353;8.69e-18;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@uc001ijm.2 | |||
}} | }} |
Latest revision as of 14:51, 23 July 2015
Short description: | p1@uc001ijm.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_uc001ijm.2_5end |
Coexpression cluster: | NA |
Association with transcript: | -36bp_to_uc001ijm.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of the bone marrow | 1.32e-09 | 6 |
oligodendrocyte | 1.89e-08 | 7 |
macroglial cell | 1.89e-08 | 7 |
astrocyte | 1.89e-08 | 7 |
oligodendrocyte precursor cell | 1.89e-08 | 7 |
neural cell | 2.06e-08 | 25 |
neuronal stem cell | 1.69e-07 | 8 |