FFCP PHASE1:Hg19::chr10:72977812..72977830,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=138bp_to_ENST00000447119_5end | |association_with_transcript=138bp_to_ENST00000447119_5end | ||
|cluster_id=chr10:72977812..72977830,- | |||
|description=CAGE_peak_1_at_ENST00000447119_5end | |description=CAGE_peak_1_at_ENST00000447119_5end | ||
|id=chr10:72977812..72977830,- | |id=chr10:72977812..72977830,- | ||
|ontology_enrichment_celltype=CL:0000066!8.73e-14!254;CL:0002076!9.55e-10!43;CL:0002321!1.14e-09!248;CL:0000220!4.52e-09!246;CL:0000076!2.32e-07!62;CL:0002251!4.60e-07!21 | |ontology_enrichment_celltype=CL:0000066!8.73e-14!254;CL:0002076!9.55e-10!43;CL:0002321!1.14e-09!248;CL:0000220!4.52e-09!246;CL:0000076!2.32e-07!62;CL:0002251!4.60e-07!21 | ||
|ontology_enrichment_celltype_v019=CL:0002076;4.08e-09;42!CL:0002178;1.70e-07;3!CL:0002251;4.86e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.15e-19,253;CL:0002076,6.20e-13,42;CL:0000223,4.66e-09,58;CL:0000076,6.76e-09,63;CL:0002178,1.62e-07,3;CL:0002251,5.17e-07,20 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!2.07e-08!14 | |ontology_enrichment_disease=DOID:1749!2.07e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.88e-13;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.62e-13,14;DOID:305,2.48e-09,106;DOID:0050687,2.22e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0000464!1.41e-08!104;UBERON:0005181!1.57e-07!35;UBERON:0005178!4.02e-07!34;UBERON:0002224!4.02e-07!34;UBERON:0001004!5.19e-07!72 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;5.24e-09;4!UBERON:0004785;5.24e-09;4!UBERON:0000974;1.43e-08;6!UBERON:0000945;2.70e-07;5!UBERON:0010039;2.70e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,5.33e-09,4;UBERON:0004785,5.33e-09,4;UBERON:0000065,5.41e-07,54;UBERON:0001004,5.68e-07,74;UBERON:0004119,9.01e-07,160;UBERON:0000925,9.01e-07,160;UBERON:0006595,9.01e-07,160 | |||
|phase1_expression=0.181678379270557,0,0,0,0.446961094427288,0,0,0.631719873426831,0,0,0,0.436882744260345,0,0.123766352960047,0,0.672325146451775,0.602694528023977,0,0.975865597581014,0.123121058076788,0,0,0,0.136874425072884,0,0.458480434487708,0.0821005894499457,0,0,0,0.154816123316076,2.75826367343678,0.30120591877825,4.80680213216824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.384273959177026,0,0.164437904603676,0.276350017785848,0,0,0,0,0,0,0.68725489096526,0,0,0.651083453856419,0,0,0.127986611154418,0,0,0,0.403213486449465,0.267440195783507,0,0,0.670700859703636,0.255725123687061,0,0,0,1.5905718941022,0,0.189069634328136,0,0.087834785693126,0.130979075497713,0.728590576585084,5.93255108455087,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0.550236083880135,0.208994966536811,0,0,0,3.62546385398232,1.52054421143703,3.1728067481262,0.367663080345869,0,0,0,0,0,0,0.183201743930407,0,0,0.436094052142534,0,0.12663051166458,0,0.573673241497627,0.354668382198357,0,0,8.6333641946006,0.311211035399766,0,0.163461903113459,0.151357427644931,0,0.234321431833797,0,0,0,0,0.161872944368132,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0.438977620880838,0,0,0.113432183160021,0,0,0.211931901159562,0,0.206105058476878,0,0.18611685633159,0,0.0974370051611986,0,0.0920498986422993,0.161646056818812,0,0,0,0.966304265816484,0,0.286804595389004,1.82960559194393,1.06023814657188,0.929551542956147,1.34759371519982,3.02785021050754,1.45990943630332,0,0,0,0,1.44375896333917,0,0,0,0,0,0,0,0,0,0.738155454624648,0,2.057870056657,0,0,0,0,0,0,0.171567810298526,0.548751427043128,0,0.201057944823262,0.648119116109707,0,0,0,0.231860809950154,0.469634776943287,1.15493158208859,0,0,0,0,0,0,0,0.93733833986777,0.335964256397719,0.283550194484773,2.32852159027406,1.16253575405585,1.53353071666084,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0.775630294546667,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,2.1100756394171,0,3.59902768255405,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.24538298343828,0,0,0.207970861530807,0.356857977594324,0.630809660135739,0.117141414992713,1.20378439891088,15.9185252839189,1.03473071292505,0,0.184369168541703,0.260650843404249,0.195801157462741,0,0,0,0,0.303127571446259,0,1.20956117331872,1.73675465473144,0,0,0.256278298511402,0,0.160853921143607,0,0,0,0,0,0,0,0.200506470303285,33.0570750279868,0.114814448164607,0.728364672026868,0.655622074797121,1.35359883872224,1.00119938235739,0,0,0.527758144464379,1.13733384070897,0.170093705276516,0.215915916102139,0,0.270946437543853,1.00337954770971,0,0,0.223874754722178,0,0,1.53870075069834,2.62411716559765,0.976135183992909,0,0,0,0,0,0,0.096670718292122,0.154048617114644,0,0,0,0.145016693914229,0,0.712256285173899,1.32227932288782,2.11409074101617,0.255225424989168,11.7343025792438,0,0,0.6970372701606,0.616067160352178,0,0,0.18532421910392,0,0.372158369359667,0,0.190630193923825,1.02359116524534,0,0,0,0.539617372749944,0.274537029736055,0.235624804691373,0.202182481573316,0,0,0.975267478179181,0.243713489631284,0,0.272999822815972,0.565621727814851,0,0,1.32687795048244,0,0.578775534266688,0.655894752046633,0.202910376962704,0,0,0.430234056612155,0.0982490410131212,0.35667105148125,0,0.211107635297664,0,0,0,3.1753297199419,0.670302275535787,1.08890984861323,0,1.29151611801369,1.68471475667626,1.33029046061003,0.229723400206959,0,0,0,0,0,0,0,0,4.05931470284398,0.962479855263359,9.80160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0.50787533340481,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935702702041099,0,0,0.111443384277478,0,0.71623345421307,0,0,0,0.281338832821026,0,0,0.422250816255987,0.597743964753209,0,0,0.102268682502155,0,0,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0.699679999969566,0,2.27586896570999,0,0.236387681767936,0,0.291604613383254,0.173624994933292,0,0,0,0,0.295547618953547,0,0,143.606456606961,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,1.22206028986725,0,0,0,0.067401132980677,0.802577647298789,0,0,3.91329237864179,0,0,1.20990716048664,0,0,0.901940516486955,0.829505531177977,0,0,0,0,0,0,2.77695581336209,6.46749822934892,0.0870592065804026,0.17472666824203,7.56738542875113,0,0,0.0821154570532092,8.72901148395775,0,0.90392296312213,0,0,0,0.391102765469606,0,0.640358984218058,2.59752492456769,28.0976313450507,0,0.171594997861965,0,0,5.89235086541989,0.271808412147228,0.104602846312333,0,0,0,0,0,0,0.525774708558629,0.279282401272254,0,0,0.599037001496973,0.429226048136571,0,0.403100834920358,0,0,0,0,0,0,0,0.795229689809303,0,3.21506296930038,3.30094647833361,1.24632101408756,0.2249738915515,0,0.0607495566580247,11.7402140659743,0,0.996637174564964,0,2.68931008999267,1.15149118391667,1.42939065274673,0.662091970365432,0,0,0,0.326587360109409,0,0.082092520749339,0,0,0.146552233678082,0,0,0,0,0,0.213574825135389,0,0.828478110694391,0,0,0,12.1284838976335,0,0,0,0,0.628216385000937,0,0.122026264901963,0,0,0,0,0.691743174681154,0.874862855734746,0,0,2.82318983637806,0.468334905806882,0,0,0,0.554805861502613,0.189403005275089,0,0,0.228840068396924,0.302461847526478,0,0,0,0,0.310525913752519,1.65882483136342,0.53168342911599,0,0.150257608997218,1.52322084867518,0.406870733204662,0.181848659202559,0.537052785212442,0,0,0,0,0,0,0,136.813735297203,4.4369029634086,0,0.231522474323834,0,0,22.23370419559,0.657852148736121,0.176689145945881,1.15748422962549,0.675769762612291,0,0.690860683462397,0,0,0.194860308839388,0,0.327130788511688,0,0,4.22624246717254,0,0,0,0,0,31.1931302214361,5.59869534029676,0.511577485214607,1.50954735955355,0,0,0.33946505990805,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.51479505104718,2.59533391365029,4.76914356156365,4.15892398141218,0.762764190934334,0,0,0.300841313397029,0,0,0,0,0.739280431085226,0,0,0,0,0.546974809018219,0,0.992422356778588,2.81393990975393,2.29972369751271,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0.313972371402056,0,8.40816489941367,0,0,0,0.142953088353313,0.158013611732727,0,0.173858272302579,0,0.62164849248911,2.21934020222135,0.691259661814092,0,0.118332000730565,0.255640214277473,0.423387050190929,3.6657098967048,0,0,0,57.6141871321476,1.21917924982269,0,0.102662806856247,0,0.485710993059139,0.233939463462106,0.198950775161368,0,0.90356865631168,0.219881033490858,4.83081099413355,0,0,0,0.245148321753905,0.707029641304878,0,0,0,0,0,0,0,3.03541695629618,0.352894871715692,0,2.92134555298607,0,0,1.73548718412503,0,0.436350690340377,0.5290268405154,0,0.462175628631418,0,0,0,1.77377901416012,4.79347499787314,2.40495664739004,12.8652859348783,2.005660314339,0.151557396436479,0.803892390468535,0,0,1.70587185520785,0.476128862927481,0.516711278688049,0.744896571550295,0,0,0.202117188958219,2.61260097476354,1.36893320434112,1.68380132536469,2.15166616178029,1.99596213927608,2.44209805832924,0,0,0,2.34640942403454,0.244482888365733,0,0,0.402547587182052,0 | |phase1_expression=0.181678379270557,0,0,0,0.446961094427288,0,0,0.631719873426831,0,0,0,0.436882744260345,0,0.123766352960047,0,0.672325146451775,0.602694528023977,0,0.975865597581014,0.123121058076788,0,0,0,0.136874425072884,0,0.458480434487708,0.0821005894499457,0,0,0,0.154816123316076,2.75826367343678,0.30120591877825,4.80680213216824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.384273959177026,0,0.164437904603676,0.276350017785848,0,0,0,0,0,0,0.68725489096526,0,0,0.651083453856419,0,0,0.127986611154418,0,0,0,0.403213486449465,0.267440195783507,0,0,0.670700859703636,0.255725123687061,0,0,0,1.5905718941022,0,0.189069634328136,0,0.087834785693126,0.130979075497713,0.728590576585084,5.93255108455087,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0.550236083880135,0.208994966536811,0,0,0,3.62546385398232,1.52054421143703,3.1728067481262,0.367663080345869,0,0,0,0,0,0,0.183201743930407,0,0,0.436094052142534,0,0.12663051166458,0,0.573673241497627,0.354668382198357,0,0,8.6333641946006,0.311211035399766,0,0.163461903113459,0.151357427644931,0,0.234321431833797,0,0,0,0,0.161872944368132,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0.438977620880838,0,0,0.113432183160021,0,0,0.211931901159562,0,0.206105058476878,0,0.18611685633159,0,0.0974370051611986,0,0.0920498986422993,0.161646056818812,0,0,0,0.966304265816484,0,0.286804595389004,1.82960559194393,1.06023814657188,0.929551542956147,1.34759371519982,3.02785021050754,1.45990943630332,0,0,0,0,1.44375896333917,0,0,0,0,0,0,0,0,0,0.738155454624648,0,2.057870056657,0,0,0,0,0,0,0.171567810298526,0.548751427043128,0,0.201057944823262,0.648119116109707,0,0,0,0.231860809950154,0.469634776943287,1.15493158208859,0,0,0,0,0,0,0,0.93733833986777,0.335964256397719,0.283550194484773,2.32852159027406,1.16253575405585,1.53353071666084,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0.775630294546667,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,2.1100756394171,0,3.59902768255405,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.24538298343828,0,0,0.207970861530807,0.356857977594324,0.630809660135739,0.117141414992713,1.20378439891088,15.9185252839189,1.03473071292505,0,0.184369168541703,0.260650843404249,0.195801157462741,0,0,0,0,0.303127571446259,0,1.20956117331872,1.73675465473144,0,0,0.256278298511402,0,0.160853921143607,0,0,0,0,0,0,0,0.200506470303285,33.0570750279868,0.114814448164607,0.728364672026868,0.655622074797121,1.35359883872224,1.00119938235739,0,0,0.527758144464379,1.13733384070897,0.170093705276516,0.215915916102139,0,0.270946437543853,1.00337954770971,0,0,0.223874754722178,0,0,1.53870075069834,2.62411716559765,0.976135183992909,0,0,0,0,0,0,0.096670718292122,0.154048617114644,0,0,0,0.145016693914229,0,0.712256285173899,1.32227932288782,2.11409074101617,0.255225424989168,11.7343025792438,0,0,0.6970372701606,0.616067160352178,0,0,0.18532421910392,0,0.372158369359667,0,0.190630193923825,1.02359116524534,0,0,0,0.539617372749944,0.274537029736055,0.235624804691373,0.202182481573316,0,0,0.975267478179181,0.243713489631284,0,0.272999822815972,0.565621727814851,0,0,1.32687795048244,0,0.578775534266688,0.655894752046633,0.202910376962704,0,0,0.430234056612155,0.0982490410131212,0.35667105148125,0,0.211107635297664,0,0,0,3.1753297199419,0.670302275535787,1.08890984861323,0,1.29151611801369,1.68471475667626,1.33029046061003,0.229723400206959,0,0,0,0,0,0,0,0,4.05931470284398,0.962479855263359,9.80160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0.50787533340481,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935702702041099,0,0,0.111443384277478,0,0.71623345421307,0,0,0,0.281338832821026,0,0,0.422250816255987,0.597743964753209,0,0,0.102268682502155,0,0,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0.699679999969566,0,2.27586896570999,0,0.236387681767936,0,0.291604613383254,0.173624994933292,0,0,0,0,0.295547618953547,0,0,143.606456606961,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,1.22206028986725,0,0,0,0.067401132980677,0.802577647298789,0,0,3.91329237864179,0,0,1.20990716048664,0,0,0.901940516486955,0.829505531177977,0,0,0,0,0,0,2.77695581336209,6.46749822934892,0.0870592065804026,0.17472666824203,7.56738542875113,0,0,0.0821154570532092,8.72901148395775,0,0.90392296312213,0,0,0,0.391102765469606,0,0.640358984218058,2.59752492456769,28.0976313450507,0,0.171594997861965,0,0,5.89235086541989,0.271808412147228,0.104602846312333,0,0,0,0,0,0,0.525774708558629,0.279282401272254,0,0,0.599037001496973,0.429226048136571,0,0.403100834920358,0,0,0,0,0,0,0,0.795229689809303,0,3.21506296930038,3.30094647833361,1.24632101408756,0.2249738915515,0,0.0607495566580247,11.7402140659743,0,0.996637174564964,0,2.68931008999267,1.15149118391667,1.42939065274673,0.662091970365432,0,0,0,0.326587360109409,0,0.082092520749339,0,0,0.146552233678082,0,0,0,0,0,0.213574825135389,0,0.828478110694391,0,0,0,12.1284838976335,0,0,0,0,0.628216385000937,0,0.122026264901963,0,0,0,0,0.691743174681154,0.874862855734746,0,0,2.82318983637806,0.468334905806882,0,0,0,0.554805861502613,0.189403005275089,0,0,0.228840068396924,0.302461847526478,0,0,0,0,0.310525913752519,1.65882483136342,0.53168342911599,0,0.150257608997218,1.52322084867518,0.406870733204662,0.181848659202559,0.537052785212442,0,0,0,0,0,0,0,136.813735297203,4.4369029634086,0,0.231522474323834,0,0,22.23370419559,0.657852148736121,0.176689145945881,1.15748422962549,0.675769762612291,0,0.690860683462397,0,0,0.194860308839388,0,0.327130788511688,0,0,4.22624246717254,0,0,0,0,0,31.1931302214361,5.59869534029676,0.511577485214607,1.50954735955355,0,0,0.33946505990805,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.51479505104718,2.59533391365029,4.76914356156365,4.15892398141218,0.762764190934334,0,0,0.300841313397029,0,0,0,0,0.739280431085226,0,0,0,0,0.546974809018219,0,0.992422356778588,2.81393990975393,2.29972369751271,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0.313972371402056,0,8.40816489941367,0,0,0,0.142953088353313,0.158013611732727,0,0.173858272302579,0,0.62164849248911,2.21934020222135,0.691259661814092,0,0.118332000730565,0.255640214277473,0.423387050190929,3.6657098967048,0,0,0,57.6141871321476,1.21917924982269,0,0.102662806856247,0,0.485710993059139,0.233939463462106,0.198950775161368,0,0.90356865631168,0.219881033490858,4.83081099413355,0,0,0,0.245148321753905,0.707029641304878,0,0,0,0,0,0,0,3.03541695629618,0.352894871715692,0,2.92134555298607,0,0,1.73548718412503,0,0.436350690340377,0.5290268405154,0,0.462175628631418,0,0,0,1.77377901416012,4.79347499787314,2.40495664739004,12.8652859348783,2.005660314339,0.151557396436479,0.803892390468535,0,0,1.70587185520785,0.476128862927481,0.516711278688049,0.744896571550295,0,0,0.202117188958219,2.61260097476354,1.36893320434112,1.68380132536469,2.15166616178029,1.99596213927608,2.44209805832924,0,0,0,2.34640942403454,0.244482888365733,0,0,0.402547587182052,0 | ||
|short_description=p1@ENST00000447119 | |short_description=p1@ENST00000447119 | ||
}} | }} |
Latest revision as of 15:14, 23 July 2015
Short description: | p1@ENST00000447119 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000447119_5end |
Coexpression cluster: | NA |
Association with transcript: | 138bp_to_ENST00000447119_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.15e-19 | 253 |
endo-epithelial cell | 6.20e-13 | 42 |
endodermal cell | 4.66e-09 | 58 |
squamous epithelial cell | 6.76e-09 | 63 |
epithelial cell of stomach | 1.62e-07 | 3 |
epithelial cell of alimentary canal | 5.17e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 5.33e-09 | 4 |
respiratory system mucosa | 5.33e-09 | 4 |
respiratory tract | 5.41e-07 | 54 |
respiratory system | 5.68e-07 | 74 |
endoderm-derived structure | 9.01e-07 | 160 |
endoderm | 9.01e-07 | 160 |
presumptive endoderm | 9.01e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.62e-13 | 14 |
carcinoma | 2.48e-09 | 106 |
cell type cancer | 2.22e-07 | 143 |