FFCP PHASE1:Hg19::chr10:73857567..73857610,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:73857567..73857610,- | |||
|coexpression_cluster_id=C20 | |coexpression_cluster_id=C20 | ||
|description=CAGE_peak_at_chr10:73857567..73857610,- | |description=CAGE_peak_at_chr10:73857567..73857610,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002150!4.84e-08!3;CL:0000861!4.84e-08!3 | |ontology_enrichment_celltype=CL:0002150!4.84e-08!3;CL:0000861!4.84e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000319;4.59e-23;1!CL:0000159;3.06e-12;2 | |ontology_enrichment_celltype_v019=CL:0000319;4.59e-23;1!CL:0000159;3.06e-12;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000319,3.28e-23,1;CL:0000159,2.59e-12,2 | |||
|ontology_enrichment_development_v019=UBERON:0004140;1.34e-23;1!UBERON:0005062;9.36e-07;4!UBERON:0007284;9.36e-07;4 | |ontology_enrichment_development_v019=UBERON:0004140;1.34e-23;1!UBERON:0005062;9.36e-07;4!UBERON:0007284;9.36e-07;4 | ||
|ontology_enrichment_disease=DOID:305!2.65e-13!106;DOID:7!2.82e-08!39;DOID:0050687!8.56e-08!143 | |ontology_enrichment_disease=DOID:305!2.65e-13!106;DOID:7!2.82e-08!39;DOID:0050687!8.56e-08!143 | ||
|ontology_enrichment_disease_v019=DOID:114;6.99e-45;2!DOID:178;4.59e-23;1!DOID:326;4.59e-23;1!DOID:3978;4.59e-23;1!DOID:3394;4.59e-23;1!DOID:3030;4.59e-23;1!DOID:5844;4.59e-23;1!DOID:1287;4.86e-23;4 | |ontology_enrichment_disease_v019=DOID:114;6.99e-45;2!DOID:178;4.59e-23;1!DOID:326;4.59e-23;1!DOID:3978;4.59e-23;1!DOID:3394;4.59e-23;1!DOID:3030;4.59e-23;1!DOID:5844;4.59e-23;1!DOID:1287;4.86e-23;4 | ||
|ontology_enrichment_disease_v019_2=DOID:114,6.26e-45,2;DOID:3030,3.28e-23,1;DOID:178,4.10e-23,1;DOID:326,4.10e-23,1;DOID:3978,4.10e-23,1;DOID:3394,4.10e-23,1;DOID:5844,4.10e-23,1;DOID:1287,4.60e-23,4 | |||
|ontology_enrichment_uberon=UBERON:0009497!1.23e-14!25;UBERON:0000015!1.23e-14!25;UBERON:0002423!1.23e-14!25;UBERON:0006235!1.23e-14!25;UBERON:0004161!1.23e-14!25;UBERON:0007499!1.75e-12!25;UBERON:0008835!2.31e-12!22;UBERON:0003894!2.31e-12!22;UBERON:0009856!7.00e-12!26;UBERON:0009854!1.06e-11!23;UBERON:0007100!1.06e-10!27;UBERON:0003929!2.41e-10!54;UBERON:0005911!1.57e-08!82;UBERON:0004151!1.65e-08!3;UBERON:0003978!1.86e-08!3;UBERON:0009751!1.86e-08!3;UBERON:0000946!1.86e-08!3;UBERON:0002523!1.86e-08!3;UBERON:0005983!1.86e-08!3;UBERON:0002165!1.86e-08!3;UBERON:0002062!1.86e-08!3;UBERON:0007280!1.86e-08!3;UBERON:0002107!2.18e-08!19;UBERON:0006925!2.18e-08!19;UBERON:0008836!2.18e-08!19;UBERON:0005172!9.16e-08!55;UBERON:0005173!9.16e-08!55;UBERON:0002294!1.17e-07!7;UBERON:0001173!1.17e-07!7;UBERON:0004912!1.17e-07!7;UBERON:0003914!3.17e-07!118;UBERON:0002368!7.10e-07!35;UBERON:0001048!9.14e-07!168 | |ontology_enrichment_uberon=UBERON:0009497!1.23e-14!25;UBERON:0000015!1.23e-14!25;UBERON:0002423!1.23e-14!25;UBERON:0006235!1.23e-14!25;UBERON:0004161!1.23e-14!25;UBERON:0007499!1.75e-12!25;UBERON:0008835!2.31e-12!22;UBERON:0003894!2.31e-12!22;UBERON:0009856!7.00e-12!26;UBERON:0009854!1.06e-11!23;UBERON:0007100!1.06e-10!27;UBERON:0003929!2.41e-10!54;UBERON:0005911!1.57e-08!82;UBERON:0004151!1.65e-08!3;UBERON:0003978!1.86e-08!3;UBERON:0009751!1.86e-08!3;UBERON:0000946!1.86e-08!3;UBERON:0002523!1.86e-08!3;UBERON:0005983!1.86e-08!3;UBERON:0002165!1.86e-08!3;UBERON:0002062!1.86e-08!3;UBERON:0007280!1.86e-08!3;UBERON:0002107!2.18e-08!19;UBERON:0006925!2.18e-08!19;UBERON:0008836!2.18e-08!19;UBERON:0005172!9.16e-08!55;UBERON:0005173!9.16e-08!55;UBERON:0002294!1.17e-07!7;UBERON:0001173!1.17e-07!7;UBERON:0004912!1.17e-07!7;UBERON:0003914!3.17e-07!118;UBERON:0002368!7.10e-07!35;UBERON:0001048!9.14e-07!168 | ||
|ontology_enrichment_uberon_v019=UBERON:0002135;4.59e-23;1!UBERON:0007100;1.53e-14;25!UBERON:0002133;3.06e-12;2!UBERON:0003978;1.35e-08;3!UBERON:0000946;1.35e-08;3 | |ontology_enrichment_uberon_v019=UBERON:0002135;4.59e-23;1!UBERON:0007100;1.53e-14;25!UBERON:0002133;3.06e-12;2!UBERON:0003978;1.35e-08;3!UBERON:0000946;1.35e-08;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002135,6.40e-23,1;UBERON:0007100,1.75e-13,27;UBERON:0002133,3.62e-12,2;UBERON:0003978,1.51e-08,3;UBERON:0009751,1.51e-08,3;UBERON:0000946,1.51e-08,3;UBERON:0002523,1.51e-08,3;UBERON:0005983,1.51e-08,3;UBERON:0002165,1.51e-08,3;UBERON:0002062,1.51e-08,3;UBERON:0007280,1.51e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0.326923806226917,0.151357427644931,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95394953340702,0,0.368965315629341,0.343135620597051,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0.0895585227028483,0,0,2.46331618947972,0,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0.602878754119172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0.501689773854853,0,0,0,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0.308097234229289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0,0,0,0,0,0,0,0,0,0,0,0,0.19606253431774,0,0,0,0.421996129056054,0,0,0,0,0.0884575645033392,0,2.37216902944498,0.988511511572023,0.522109747527277,0,0,0,0,0.586993856796269,0,0,0,0,0.063186579628488,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0.0979923974143777,0.0870592065804026,0,0,0.677294319023596,0.584714536689484,0.246346371159628,0,0,0,0,0,0,0.195551382734803,0,0.426905989478705,0,0,0,0,0,0,0.471388069233591,0,0.104602846312333,0,0,0,0,0,0,0,1.11712960508902,0.458320848023367,0.717873024576814,1.59743200399193,6.43839072204856,0.446342914883745,4.70284307407084,0,0,0.236349546921671,0.247247575143499,0.471824806979294,0.196854963029498,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0.179287339332845,0,0.714695326373367,0.662091970365432,0,0.542999601753713,0,0,0,0,0,0,0.293104467356165,1.32506888912221,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0.428883182749851,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,1.96618327002975,0.211312123358627,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0.294443155503077,0,0,0.462102664601353,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354581522651905,0.222462803784138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.68732060563215,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0.240724100067505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0.326923806226917,0.151357427644931,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95394953340702,0,0.368965315629341,0.343135620597051,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0.0895585227028483,0,0,2.46331618947972,0,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0.602878754119172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0.501689773854853,0,0,0,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0.308097234229289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0,0,0,0,0,0,0,0,0,0,0,0,0.19606253431774,0,0,0,0.421996129056054,0,0,0,0,0.0884575645033392,0,2.37216902944498,0.988511511572023,0.522109747527277,0,0,0,0,0.586993856796269,0,0,0,0,0.063186579628488,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0.0979923974143777,0.0870592065804026,0,0,0.677294319023596,0.584714536689484,0.246346371159628,0,0,0,0,0,0,0.195551382734803,0,0.426905989478705,0,0,0,0,0,0,0.471388069233591,0,0.104602846312333,0,0,0,0,0,0,0,1.11712960508902,0.458320848023367,0.717873024576814,1.59743200399193,6.43839072204856,0.446342914883745,4.70284307407084,0,0,0.236349546921671,0.247247575143499,0.471824806979294,0.196854963029498,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0.179287339332845,0,0.714695326373367,0.662091970365432,0,0.542999601753713,0,0,0,0,0,0,0.293104467356165,1.32506888912221,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0.428883182749851,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,1.96618327002975,0.211312123358627,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0.294443155503077,0,0,0.462102664601353,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354581522651905,0.222462803784138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.68732060563215,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0.240724100067505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:73857567..73857610,- | |short_description=p@chr10:73857567..73857610,- | ||
}} | }} |
Latest revision as of 15:24, 23 July 2015
Short description: | p@chr10:73857567..73857610, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:73857567..73857610, - |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 3.28e-23 | 1 |
seromucus secreting cell | 2.59e-12 | 2 |
Ontology term | p-value | n |
---|---|---|
mitral valve | 6.40e-23 | 1 |
primary circulatory organ | 1.75e-13 | 27 |
atrioventricular valve | 3.62e-12 | 2 |
valve | 1.51e-08 | 3 |
cardiac mesenchyme | 1.51e-08 | 3 |
cardial valve | 1.51e-08 | 3 |
tunica intima | 1.51e-08 | 3 |
heart layer | 1.51e-08 | 3 |
endocardium | 1.51e-08 | 3 |
endocardial cushion | 1.51e-08 | 3 |
presumptive endocardium | 1.51e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
heart disease | 6.26e-45 | 2 |
mucinous adenocarcinoma | 3.28e-23 | 1 |
vascular disease | 4.10e-23 | 1 |
ischemia | 4.10e-23 | 1 |
extrinsic cardiomyopathy | 4.10e-23 | 1 |
myocardial ischemia | 4.10e-23 | 1 |
myocardial infarction | 4.10e-23 | 1 |
cardiovascular system disease | 4.60e-23 | 4 |