FFCP PHASE1:Hg19::chr10:88476070..88476079,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:88476070..88476079,+ | |||
|coexpression_cluster_id=C20 | |coexpression_cluster_id=C20 | ||
|description=CAGE_peak_at_chr10:88476070..88476079,+ | |description=CAGE_peak_at_chr10:88476070..88476079,+ | ||
|id=chr10:88476070..88476079,+ | |id=chr10:88476070..88476079,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004140;6.72e-26;1!UBERON:0005062;1.40e-07;4!UBERON:0007284;1.40e-07;4 | |||
|ontology_enrichment_disease=DOID:114!1.32e-08!2 | |ontology_enrichment_disease=DOID:114!1.32e-08!2 | ||
|ontology_enrichment_disease_v019=DOID:114;2.13e-50;2!DOID:178;6.72e-26;1!DOID:326;6.72e-26;1!DOID:3978;6.72e-26;1!DOID:3394;6.72e-26;1!DOID:5844;6.72e-26;1!DOID:1287;8.13e-26;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.46e-50,2;DOID:178,4.61e-26,1;DOID:326,4.61e-26,1;DOID:3978,4.61e-26,1;DOID:3394,4.61e-26,1;DOID:5844,4.61e-26,1;DOID:1287,6.73e-26,4 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002146;2.78e-26;1!UBERON:0005623;2.78e-26;1!UBERON:0002038;6.72e-26;1!UBERON:0002426;6.72e-26;1!UBERON:0003831;6.72e-26;1!UBERON:0003898;6.72e-26;1!UBERON:0004830;6.72e-26;1!UBERON:0009661;6.72e-26;1!UBERON:0002950;6.72e-26;1!UBERON:0003830;6.72e-26;1!UBERON:0005175;6.72e-26;1!UBERON:0001774;6.72e-26;1!UBERON:0001103;6.72e-26;1!UBERON:0001891;6.72e-26;1!UBERON:0007100;2.29e-16;25!UBERON:0003127;1.14e-13;2!UBERON:0005090;1.14e-13;2!UBERON:0001630;1.14e-13;2!UBERON:0003978;1.10e-09;3!UBERON:0000946;1.10e-09;3!UBERON:0003103;4.79e-07;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002146,2.78e-26,1;UBERON:0005623,2.78e-26,1;UBERON:0002426,3.58e-26,1;UBERON:0003831,3.58e-26,1;UBERON:0003898,3.58e-26,1;UBERON:0004830,3.58e-26,1;UBERON:0003830,3.58e-26,1;UBERON:0005175,3.58e-26,1;UBERON:0001774,3.58e-26,1;UBERON:0001103,3.58e-26,1;UBERON:0010084,3.58e-26,1;UBERON:0002038,1.26e-25,1;UBERON:0009661,1.26e-25,1;UBERON:0002950,1.26e-25,1;UBERON:0001891,1.26e-25,1;UBERON:0009616,1.26e-25,1;UBERON:0010286,1.26e-25,1;UBERON:0007100,3.42e-15,27;UBERON:0005090,8.28e-14,2;UBERON:0001630,8.28e-14,2;UBERON:0003127,1.21e-13,2;UBERON:0003978,1.10e-09,3;UBERON:0009751,1.10e-09,3;UBERON:0000946,1.10e-09,3;UBERON:0002523,1.10e-09,3;UBERON:0005983,1.10e-09,3;UBERON:0002165,1.10e-09,3;UBERON:0002062,1.10e-09,3;UBERON:0007280,1.10e-09,3;UBERON:0003103,2.23e-09,68 | |||
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| ||
|short_description=p@chr10:88476070..88476079,+ | |short_description=p@chr10:88476070..88476079,+ | ||
}} | }} |
Latest revision as of 16:21, 23 July 2015
Short description: | p@chr10:88476070..88476079, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:88476070..88476079, + |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pulmonary valve | 2.78e-26 | 1 |
semi-lunar valve | 2.78e-26 | 1 |
chest muscle | 3.58e-26 | 1 |
respiratory system muscle | 3.58e-26 | 1 |
skeletal muscle of trunk | 3.58e-26 | 1 |
respiratory system skeletal muscle | 3.58e-26 | 1 |
thoracic segment muscle | 3.58e-26 | 1 |
chest organ | 3.58e-26 | 1 |
muscle of trunk | 3.58e-26 | 1 |
diaphragm | 3.58e-26 | 1 |
future diaphragm | 3.58e-26 | 1 |
substantia nigra | 1.26e-25 | 1 |
midbrain nucleus | 1.26e-25 | 1 |
regional part of midbrain | 1.26e-25 | 1 |
midbrain | 1.26e-25 | 1 |
presumptive midbrain | 1.26e-25 | 1 |
midbrain neural tube | 1.26e-25 | 1 |
primary circulatory organ | 3.42e-15 | 27 |
muscle structure | 8.28e-14 | 2 |
muscle organ | 8.28e-14 | 2 |
open tracheal system trachea | 1.21e-13 | 2 |
valve | 1.10e-09 | 3 |
cardiac mesenchyme | 1.10e-09 | 3 |
cardial valve | 1.10e-09 | 3 |
tunica intima | 1.10e-09 | 3 |
heart layer | 1.10e-09 | 3 |
endocardium | 1.10e-09 | 3 |
endocardial cushion | 1.10e-09 | 3 |
presumptive endocardium | 1.10e-09 | 3 |
compound organ | 2.23e-09 | 68 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.46e-50 | 2 |
vascular disease | 4.61e-26 | 1 |
ischemia | 4.61e-26 | 1 |
extrinsic cardiomyopathy | 4.61e-26 | 1 |
myocardial ischemia | 4.61e-26 | 1 |
myocardial infarction | 4.61e-26 | 1 |
cardiovascular system disease | 6.73e-26 | 4 |