FFCP PHASE1:Hg19::chr10:92706978..92707003,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:92706978..92707003,+ | |||
|coexpression_cluster_id=C141 | |coexpression_cluster_id=C141 | ||
|description=CAGE_peak_at_chr10:92706978..92707003,+ | |description=CAGE_peak_at_chr10:92706978..92707003,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000838!1.43e-07!52;CL:0000542!2.14e-07!53;CL:0000051!2.14e-07!53 | |ontology_enrichment_celltype=CL:0000838!1.43e-07!52;CL:0000542!2.14e-07!53;CL:0000051!2.14e-07!53 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006965;2.90e-12;2 | |ontology_enrichment_development_v019=UBERON:0006965;2.90e-12;2 | ||
|ontology_enrichment_disease=DOID:2531!8.68e-19!51;DOID:0060083!8.68e-19!51;DOID:1240!1.98e-13!39;DOID:0060058!2.52e-12!10;DOID:8692!4.73e-07!31 | |ontology_enrichment_disease=DOID:2531!8.68e-19!51;DOID:0060083!8.68e-19!51;DOID:1240!1.98e-13!39;DOID:0060058!2.52e-12!10;DOID:8692!4.73e-07!31 | ||
|ontology_enrichment_disease_v019=DOID:9119;2.62e-23;1!DOID:2531;5.67e-09;51!DOID:0060083;5.67e-09;51!DOID:1240;3.64e-08;39 | |ontology_enrichment_disease_v019=DOID:9119;2.62e-23;1!DOID:2531;5.67e-09;51!DOID:0060083;5.67e-09;51!DOID:1240;3.64e-08;39 | ||
|ontology_enrichment_disease_v019_2=DOID:9119,2.62e-23,1;DOID:2531,5.20e-11,51;DOID:0060083,5.20e-11,51;DOID:1240,1.99e-09,39 | |||
|ontology_enrichment_uberon=UBERON:0002370!4.07e-12!4;UBERON:0005058!4.07e-12!4;UBERON:0009113!4.07e-12!4;UBERON:0003295!4.07e-12!4;UBERON:0005562!4.07e-12!4;UBERON:0004177!1.33e-11!7;UBERON:0000974!2.70e-08!10;UBERON:0003351!3.19e-08!6 | |ontology_enrichment_uberon=UBERON:0002370!4.07e-12!4;UBERON:0005058!4.07e-12!4;UBERON:0009113!4.07e-12!4;UBERON:0003295!4.07e-12!4;UBERON:0005562!4.07e-12!4;UBERON:0004177!1.33e-11!7;UBERON:0000974!2.70e-08!10;UBERON:0003351!3.19e-08!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;3.19e-45;2!UBERON:0005058;3.19e-45;2!UBERON:0009113;3.19e-45;2!UBERON:0004177;8.66e-19;5!UBERON:0005057;8.66e-19;5 | |ontology_enrichment_uberon_v019=UBERON:0002370;3.19e-45;2!UBERON:0005058;3.19e-45;2!UBERON:0009113;3.19e-45;2!UBERON:0004177;8.66e-19;5!UBERON:0005057;8.66e-19;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.68e-23,4;UBERON:0005058,3.68e-23,4;UBERON:0009113,3.68e-23,4;UBERON:0003295,3.68e-23,4;UBERON:0005562,3.68e-23,4;UBERON:0003351,8.39e-16,6;UBERON:0004177,1.08e-13,7;UBERON:0005057,1.08e-13,7;UBERON:0000974,7.08e-10,10;UBERON:0003408,7.08e-10,10;UBERON:0001042,7.08e-10,10;UBERON:0009145,7.08e-10,10;UBERON:0006562,4.61e-09,11;UBERON:0009722,4.61e-09,11;UBERON:0007690,4.61e-09,11 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.157421562627358,0,0,0,0,0,0,0,0.853015394924529,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.8024298830249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.60816304515811,5.10164072732231,0,0.191505370132367,0,0.649243880549111,0.842391534340376,0,0,2.50634477090067,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,7.32758329595204,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57723490002507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,12.0781261393331,8.00763814416567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.62292828463847,0 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.157421562627358,0,0,0,0,0,0,0,0.853015394924529,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.8024298830249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.60816304515811,5.10164072732231,0,0.191505370132367,0,0.649243880549111,0.842391534340376,0,0,2.50634477090067,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,7.32758329595204,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57723490002507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,12.0781261393331,8.00763814416567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.62292828463847,0 | ||
|short_description=p@chr10:92706978..92707003,+ | |short_description=p@chr10:92706978..92707003,+ | ||
}} | }} |
Latest revision as of 16:43, 23 July 2015
Short description: | p@chr10:92706978..92707003, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:92706978..92707003, + |
Coexpression cluster: | C141_Hodgkin_acute_thymus_chronic_vein_CD4_B |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 3.68e-23 | 4 |
hemolymphoid system gland | 3.68e-23 | 4 |
thymic region | 3.68e-23 | 4 |
pharyngeal gland | 3.68e-23 | 4 |
thymus primordium | 3.68e-23 | 4 |
pharyngeal epithelium | 8.39e-16 | 6 |
hemopoietic organ | 1.08e-13 | 7 |
immune organ | 1.08e-13 | 7 |
neck | 7.08e-10 | 10 |
gland of gut | 7.08e-10 | 10 |
chordate pharynx | 7.08e-10 | 10 |
pharyngeal region of foregut | 7.08e-10 | 10 |
pharynx | 4.61e-09 | 11 |
entire pharyngeal arch endoderm | 4.61e-09 | 11 |
early pharyngeal endoderm | 4.61e-09 | 11 |
Ontology term | p-value | n |
---|---|---|
acute myeloid leukemia | 2.62e-23 | 1 |
hematologic cancer | 5.20e-11 | 51 |
immune system cancer | 5.20e-11 | 51 |
leukemia | 1.99e-09 | 39 |