FFCP PHASE1:Hg19::chr10:97262828..97262865,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:97262828..97262865,- | |||
|coexpression_cluster_id=C48 | |coexpression_cluster_id=C48 | ||
|description=CAGE_peak_at_chr10:97262828..97262865,- | |description=CAGE_peak_at_chr10:97262828..97262865,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000632;6.78e-08;3 | |ontology_enrichment_celltype_v019=CL:0000632;6.78e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000632,7.26e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0009143;3.12e-21;1!UBERON:0006965;3.35e-11;2!UBERON:0009847;5.73e-08;3!UBERON:0003353;5.73e-08;3!UBERON:0006603;3.99e-07;65 | |ontology_enrichment_development_v019=UBERON:0009143;3.12e-21;1!UBERON:0006965;3.35e-11;2!UBERON:0009847;5.73e-08;3!UBERON:0003353;5.73e-08;3!UBERON:0006603;3.99e-07;65 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3571;5.16e-21;1!DOID:3350;3.35e-11;2 | |ontology_enrichment_disease_v019=DOID:3571;5.16e-21;1!DOID:3350;3.35e-11;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3571,6.31e-21,1;DOID:3350,3.70e-11,2 | |||
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|ontology_enrichment_uberon_v019=UBERON:0000996;2.30e-21;1!UBERON:0006834;8.53e-21;1!UBERON:0001255;2.02e-11;2!UBERON:0001556;2.02e-11;2!UBERON:0001043;5.73e-08;3!UBERON:0000077;2.57e-07;27 | |ontology_enrichment_uberon_v019=UBERON:0000996;2.30e-21;1!UBERON:0006834;8.53e-21;1!UBERON:0001255;2.02e-11;2!UBERON:0001556;2.02e-11;2!UBERON:0001043;5.73e-08;3!UBERON:0000077;2.57e-07;27 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000996,2.30e-21,1;UBERON:0006834,7.72e-21,1;UBERON:0000162,1.47e-13,14;UBERON:0001353,1.47e-13,14;UBERON:0000163,1.47e-13,14;UBERON:0006866,1.47e-13,14;UBERON:0000164,1.47e-13,14;UBERON:0000931,1.47e-13,14;UBERON:0004122,1.06e-12,15;UBERON:0001255,2.02e-11,2;UBERON:0001556,2.02e-11,2;UBERON:0007023,8.23e-11,114;UBERON:0001046,3.68e-10,19;UBERON:0001043,5.93e-08,3;UBERON:0009143,5.93e-08,3;UBERON:0003064,4.44e-07,28;UBERON:0000077,7.47e-07,29 | |||
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| ||
|short_description=p@chr10:97262828..97262865,- | |short_description=p@chr10:97262828..97262865,- | ||
}} | }} |
Latest revision as of 17:03, 23 July 2015
Short description: | p@chr10:97262828..97262865, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:97262828..97262865, - |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stellate cell | 7.26e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
vagina | 2.30e-21 | 1 |
uterus or analog | 7.72e-21 | 1 |
cloaca | 1.47e-13 | 14 |
anal region | 1.47e-13 | 14 |
embryonic cloaca | 1.47e-13 | 14 |
terminal part of digestive tract | 1.47e-13 | 14 |
primitive urogenital sinus | 1.47e-13 | 14 |
proctodeum | 1.47e-13 | 14 |
genitourinary system | 1.06e-12 | 15 |
urinary bladder | 2.02e-11 | 2 |
lower urinary tract | 2.02e-11 | 2 |
adult organism | 8.23e-11 | 114 |
hindgut | 3.68e-10 | 19 |
esophagus | 5.93e-08 | 3 |
esophageal region | 5.93e-08 | 3 |
intermediate mesoderm | 4.44e-07 | 28 |
mixed endoderm/mesoderm-derived structure | 7.47e-07 | 29 |
Ontology term | p-value | n |
---|---|---|
liver cancer | 6.31e-21 | 1 |
mesenchymal cell neoplasm | 3.70e-11 | 2 |