FFCP PHASE1:Hg19::chr11:119983090..119983110,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
|||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:119983090..119983110,- | |||
|description=CAGE_peak_at_chr11:119983090..119983110,- | |description=CAGE_peak_at_chr11:119983090..119983110,- | ||
|id=chr11:119983090..119983110,- | |id=chr11:119983090..119983110,- | ||
|ontology_enrichment_celltype=CL:0000066!3.21e-16!254;CL:0002076!8.94e-15!43;CL:0002251!9.00e-11!21;CL:0000223!2.28e-10!59;CL:0002159!1.01e-08!13;CL:0000622!4.11e-07!5 | |ontology_enrichment_celltype=CL:0000066!3.21e-16!254;CL:0002076!8.94e-15!43;CL:0002251!9.00e-11!21;CL:0000223!2.28e-10!59;CL:0002159!1.01e-08!13;CL:0000622!4.11e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002336;6.05e-10;1!CL:0002261;6.05e-10;1!CL:0002252;6.05e-10;1!CL:0002170;6.05e-10;1!CL:0002537;4.08e-08;5!CL:0000349;1.11e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002252,3.40e-10,1;CL:0002336,9.82e-10,1;CL:0002261,9.82e-10,1;CL:0002170,9.82e-10,1;CL:0002537,4.01e-08,5;CL:0000349,1.06e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0008947;6.04e-14;29!UBERON:0009143;1.64e-10;1!UBERON:0004874;6.05e-10;1 | |||
|ontology_enrichment_disease=DOID:305!3.01e-11!106 | |ontology_enrichment_disease=DOID:305!3.01e-11!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001557!2.60e-19!19;UBERON:0001737!3.95e-19!9;UBERON:0004119!6.92e-18!169;UBERON:0000925!6.92e-18!169;UBERON:0006595!6.92e-18!169;UBERON:0001004!2.15e-17!72;UBERON:0000065!2.23e-13!53;UBERON:0000077!3.37e-13!130;UBERON:0005631!6.81e-13!14;UBERON:0000158!6.81e-13!14;UBERON:0001007!3.16e-12!155;UBERON:0001555!3.16e-12!155;UBERON:0007026!3.16e-12!155;UBERON:0000161!4.62e-12!35;UBERON:0000166!4.31e-11!21;UBERON:0000072!1.53e-10!46;UBERON:0001041!5.73e-10!98;UBERON:0004921!7.57e-10!129;UBERON:0004185!7.57e-10!129;UBERON:0003124!9.03e-10!7;UBERON:0000165!3.56e-09!28;UBERON:0000930!3.56e-09!28;UBERON:0003102!2.78e-07!95;UBERON:0001723!5.29e-07!3;UBERON:0001033!5.29e-07!3;UBERON:0010056!5.29e-07!3;UBERON:0008947!8.32e-07!38;UBERON:0003258!8.32e-07!38 | |ontology_enrichment_uberon=UBERON:0001557!2.60e-19!19;UBERON:0001737!3.95e-19!9;UBERON:0004119!6.92e-18!169;UBERON:0000925!6.92e-18!169;UBERON:0006595!6.92e-18!169;UBERON:0001004!2.15e-17!72;UBERON:0000065!2.23e-13!53;UBERON:0000077!3.37e-13!130;UBERON:0005631!6.81e-13!14;UBERON:0000158!6.81e-13!14;UBERON:0001007!3.16e-12!155;UBERON:0001555!3.16e-12!155;UBERON:0007026!3.16e-12!155;UBERON:0000161!4.62e-12!35;UBERON:0000166!4.31e-11!21;UBERON:0000072!1.53e-10!46;UBERON:0001041!5.73e-10!98;UBERON:0004921!7.57e-10!129;UBERON:0004185!7.57e-10!129;UBERON:0003124!9.03e-10!7;UBERON:0000165!3.56e-09!28;UBERON:0000930!3.56e-09!28;UBERON:0003102!2.78e-07!95;UBERON:0001723!5.29e-07!3;UBERON:0001033!5.29e-07!3;UBERON:0010056!5.29e-07!3;UBERON:0008947!8.32e-07!38;UBERON:0003258!8.32e-07!38 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.58e-34;9!UBERON:0001557;2.58e-34;9!UBERON:0000072;3.20e-13;37!UBERON:0001043;8.57e-13;3!UBERON:0001723;9.09e-13;3!UBERON:0001033;9.09e-13;3!UBERON:0000065;3.94e-10;44!UBERON:0002372;6.05e-10;1!UBERON:0000989;6.05e-10;1!UBERON:0008811;6.05e-10;1!UBERON:0001961;6.05e-10;1!UBERON:0001744;6.05e-10;1!UBERON:0001042;6.05e-10;1!UBERON:0001735;6.05e-10;1!UBERON:0005631;1.19e-08;10!UBERON:0000158;1.19e-08;10!UBERON:0001004;9.10e-08;65!UBERON:0000165;1.26e-07;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001557,1.07e-35,19;UBERON:0001737,1.89e-34,9;UBERON:0000072,1.90e-20,47;UBERON:0000065,1.42e-17,54;UBERON:0001041,3.58e-17,87;UBERON:0001004,7.98e-15,74;UBERON:0004921,7.60e-14,118;UBERON:0008947,1.48e-13,38;UBERON:0003258,1.48e-13,38;UBERON:0001043,5.85e-13,3;UBERON:0009143,5.85e-13,3;UBERON:0004119,1.12e-12,160;UBERON:0000925,1.12e-12,160;UBERON:0006595,1.12e-12,160;UBERON:0001723,1.41e-12,3;UBERON:0001033,1.41e-12,3;UBERON:0010056,1.41e-12,3;UBERON:0001007,1.85e-12,145;UBERON:0001555,1.85e-12,145;UBERON:0007026,1.85e-12,145;UBERON:0005631,2.09e-10,14;UBERON:0000158,2.09e-10,14;UBERON:0000989,3.10e-10,1;UBERON:0008811,3.10e-10,1;UBERON:0006258,3.10e-10,1;UBERON:0005876,3.10e-10,1;UBERON:0004874,3.10e-10,1;UBERON:0002372,6.91e-10,1;UBERON:0001961,6.91e-10,1;UBERON:0001744,6.91e-10,1;UBERON:0001735,6.91e-10,1;UBERON:0001042,2.40e-08,10;UBERON:0009145,2.40e-08,10;UBERON:0006562,1.25e-07,11;UBERON:0000165,2.69e-07,29;UBERON:0000930,2.69e-07,29 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.0654895377488563,0.364295288292542,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74437620857014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,1.30137480043828,1.51726221070292,2.16909926895134,0.441175890929576,0.653638332277218,0.474541238222193,3.10112008768378,1.17732879075208,1.53898862778556,0,0,0,0,0,0,0,0,0,0,0.98775256867763,0,0.301586917234893,1.11106134190236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0.268675568108545,0.871901815541886,0.383382679165211,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5156378572313,0,0.30239029332968,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,1.40354529212299,0.736647911487171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0.574265537996172,0.650060246036521,0,0,0,0,0,0,0,0,0,0.330569830721956,0.384380134730212,0.127612712494584,0.708104465988849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445773537109913,0,2.14870036263921,0.890894042497916,3.37876772309155,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0.341380344856499,0,1.18193840883968,0,0,0,0,0,0,0,0,0,0,0.975966209950223,0.615602068030377,0,0,0,0,0.31900115973192,0.183195186803725,3.19820865611181,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391969589657511,0,0,0,0.387025325156341,0.219267951258557,0.574808199372465,6.11030803877042,0,0.225980740780532,0,0,0,0.782205530939212,0,0.213452994739353,0.39961921916426,0,0,0,0,0,0.707082103850386,0,0,0,0,0,0,0,0,0,0,0,0,0.599037001496973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0.183428598521679,0.115525666150338,0,0,0,0,0,0,0,0.163771917510097,0.295712172434091,0,0,0,0,0,0,1.98484471355718,0,0.766574565837572,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0,0,0,0,0,0.414432328326074,1.53646629384555,0,0.430227358820278,0,0,0,0.22910686854405,0,0,0,0.098150233615243,0.121917924982269,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.426467963801962,0.23806443146374,0.0645889098360061,0,0,0,0,4.78976845373315,1.02669990325584,1.21233695426258,0.430333232356058,0,0.0814032686109745,0,0,0,0,0,0.813792356631477,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.0654895377488563,0.364295288292542,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74437620857014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,1.30137480043828,1.51726221070292,2.16909926895134,0.441175890929576,0.653638332277218,0.474541238222193,3.10112008768378,1.17732879075208,1.53898862778556,0,0,0,0,0,0,0,0,0,0,0.98775256867763,0,0.301586917234893,1.11106134190236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0.268675568108545,0.871901815541886,0.383382679165211,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5156378572313,0,0.30239029332968,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,1.40354529212299,0.736647911487171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0.574265537996172,0.650060246036521,0,0,0,0,0,0,0,0,0,0.330569830721956,0.384380134730212,0.127612712494584,0.708104465988849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445773537109913,0,2.14870036263921,0.890894042497916,3.37876772309155,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0.341380344856499,0,1.18193840883968,0,0,0,0,0,0,0,0,0,0,0.975966209950223,0.615602068030377,0,0,0,0,0.31900115973192,0.183195186803725,3.19820865611181,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391969589657511,0,0,0,0.387025325156341,0.219267951258557,0.574808199372465,6.11030803877042,0,0.225980740780532,0,0,0,0.782205530939212,0,0.213452994739353,0.39961921916426,0,0,0,0,0,0.707082103850386,0,0,0,0,0,0,0,0,0,0,0,0,0.599037001496973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0.183428598521679,0.115525666150338,0,0,0,0,0,0,0,0.163771917510097,0.295712172434091,0,0,0,0,0,0,1.98484471355718,0,0.766574565837572,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0,0,0,0,0,0.414432328326074,1.53646629384555,0,0.430227358820278,0,0,0,0.22910686854405,0,0,0,0.098150233615243,0.121917924982269,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.426467963801962,0.23806443146374,0.0645889098360061,0,0,0,0,4.78976845373315,1.02669990325584,1.21233695426258,0.430333232356058,0,0.0814032686109745,0,0,0,0,0,0.813792356631477,0,0,0 | ||
|short_description=p@chr11:119983090..119983110,- | |short_description=p@chr11:119983090..119983110,- | ||
}} | }} |
Latest revision as of 19:04, 23 July 2015
Short description: | p@chr11:119983090..119983110, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:119983090..119983110, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of esophagus | 3.40e-10 | 1 |
buccal mucosa cell | 9.82e-10 | 1 |
endothelial cell of viscerocranial mucosa | 9.82e-10 | 1 |
keratinized cell of the oral mucosa | 9.82e-10 | 1 |
amnion mesenchymal stem cell | 4.01e-08 | 5 |
extraembryonic cell | 1.06e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
upper respiratory tract | 1.07e-35 | 19 |
larynx | 1.89e-34 | 9 |
segment of respiratory tract | 1.90e-20 | 47 |
respiratory tract | 1.42e-17 | 54 |
foregut | 3.58e-17 | 87 |
respiratory system | 7.98e-15 | 74 |
subdivision of digestive tract | 7.60e-14 | 118 |
respiratory primordium | 1.48e-13 | 38 |
endoderm of foregut | 1.48e-13 | 38 |
esophagus | 5.85e-13 | 3 |
esophageal region | 5.85e-13 | 3 |
endoderm-derived structure | 1.12e-12 | 160 |
endoderm | 1.12e-12 | 160 |
presumptive endoderm | 1.12e-12 | 160 |
tongue | 1.41e-12 | 3 |
gustatory system | 1.41e-12 | 3 |
future tongue | 1.41e-12 | 3 |
digestive system | 1.85e-12 | 145 |
digestive tract | 1.85e-12 | 145 |
primitive gut | 1.85e-12 | 145 |
extraembryonic membrane | 2.09e-10 | 14 |
membranous layer | 2.09e-10 | 14 |
penis | 3.10e-10 | 1 |
intromittent organ | 3.10e-10 | 1 |
lateral plate mesenchyme | 3.10e-10 | 1 |
undifferentiated genital tubercle | 3.10e-10 | 1 |
somatopleure | 3.10e-10 | 1 |
tonsil | 6.91e-10 | 1 |
mucosa-associated lymphoid tissue | 6.91e-10 | 1 |
lymphoid tissue | 6.91e-10 | 1 |
tonsillar ring | 6.91e-10 | 1 |
chordate pharynx | 2.40e-08 | 10 |
pharyngeal region of foregut | 2.40e-08 | 10 |
pharynx | 1.25e-07 | 11 |
mouth | 2.69e-07 | 29 |
stomodeum | 2.69e-07 | 29 |