FFCP PHASE1:Hg19::chr11:121421149..121421227,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:121421149..121421227,+ | |||
|coexpression_cluster_id=C528 | |||
|description=CAGE_peak_at_chr11:121421149..121421227,+ | |description=CAGE_peak_at_chr11:121421149..121421227,+ | ||
|id=chr11:121421149..121421227,+ | |id=chr11:121421149..121421227,+ | ||
|ontology_enrichment_celltype=CL:0002076!4.97e-14!43;CL:0002159!1.07e-11!13;CL:0002368!7.56e-11!13;CL:0000223!3.07e-08!59;CL:0000622!9.22e-08!5;CL:0000244!4.44e-07!4;CL:0000731!4.44e-07!4 | |ontology_enrichment_celltype=CL:0002076!4.97e-14!43;CL:0002159!1.07e-11!13;CL:0002368!7.56e-11!13;CL:0000223!3.07e-08!59;CL:0000622!9.22e-08!5;CL:0000244!4.44e-07!4;CL:0000731!4.44e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002159;9.96e-28;14!CL:0002368;1.27e-27;13!CL:0002076;3.91e-23;42!CL:0000244;5.57e-16;4!CL:0000731;5.57e-16;4!CL:0002202;3.57e-15;9!CL:0002632;3.57e-15;9!CL:0002166;1.73e-13;3!CL:0002621;2.50e-13;3!CL:0002077;9.35e-13;34!CL:0000307;1.58e-12;3!CL:0002328;2.67e-12;3!CL:0000362;2.18e-11;9!CL:0000240;2.49e-11;6!CL:0000311;2.49e-11;6!CL:0000079;2.49e-11;6!CL:0000237;2.49e-11;6!CL:0002327;1.77e-09;4!CL:0000317;2.69e-09;2!CL:1000448;2.69e-09;2!CL:0002308;2.69e-09;2!CL:0002140;2.69e-09;2!CL:0000575;7.00e-09;2!CL:0002251;8.32e-09;20!CL:0000312;4.40e-08;5!CL:0000622;1.00e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.31e-28,42;CL:0002159,1.01e-27,14;CL:0002368,1.03e-27,13;CL:0000223,2.07e-19,58;CL:0000066,6.83e-17,253;CL:0000244,6.14e-16,4;CL:0000731,6.14e-16,4;CL:0002202,3.36e-15,9;CL:0002632,3.36e-15,9;CL:0002077,1.06e-14,34;CL:0002166,1.73e-13,3;CL:0002621,2.50e-13,3;CL:0000068,1.49e-12,3;CL:0000069,1.49e-12,3;CL:0000307,1.49e-12,3;CL:0000377,1.49e-12,3;CL:0002328,2.57e-12,3;CL:0000362,2.21e-11,9;CL:0000240,2.49e-11,6;CL:0000311,2.49e-11,6;CL:0000079,2.49e-11,6;CL:0000237,2.49e-11,6;CL:0000036,2.49e-11,6;CL:0000357,2.49e-11,6;CL:0000114,2.49e-11,6;CL:0002327,1.75e-09,4;CL:0000317,2.70e-09,2;CL:1000448,2.70e-09,2;CL:0002308,2.70e-09,2;CL:0002140,2.70e-09,2;CL:0000575,7.00e-09,2;CL:0002251,8.37e-09,20;CL:0002321,2.45e-08,250;CL:0000312,4.45e-08,5;CL:0000622,1.00e-07,5;CL:0000221,1.64e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000377;1.58e-12;3!CL:0000357;2.49e-11;6!CL:0000114;2.49e-11;6!CL:0000223;5.48e-11;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.34e-10!123;UBERON:0001049!1.67e-10!57;UBERON:0005068!1.67e-10!57;UBERON:0006241!1.67e-10!57;UBERON:0007135!1.67e-10!57;UBERON:0000153!1.50e-09!129;UBERON:0007811!1.50e-09!129;UBERON:0007023!2.96e-09!115;UBERON:0004121!3.92e-09!169;UBERON:0000924!1.31e-08!173;UBERON:0006601!1.31e-08!173;UBERON:0001893!1.50e-08!34;UBERON:0002020!2.51e-08!34;UBERON:0003528!2.51e-08!34;UBERON:0002780!3.21e-08!41;UBERON:0001890!3.21e-08!41;UBERON:0006240!3.21e-08!41;UBERON:0003080!6.67e-08!42;UBERON:0002791!7.02e-08!33;UBERON:0002616!1.73e-07!59;UBERON:0002308!2.29e-07!9;UBERON:0000125!2.29e-07!9;UBERON:0001869!4.15e-07!32;UBERON:0003075!5.96e-07!86;UBERON:0007284!5.96e-07!86;UBERON:0001017!8.39e-07!82 | |ontology_enrichment_uberon=UBERON:0000033!1.34e-10!123;UBERON:0001049!1.67e-10!57;UBERON:0005068!1.67e-10!57;UBERON:0006241!1.67e-10!57;UBERON:0007135!1.67e-10!57;UBERON:0000153!1.50e-09!129;UBERON:0007811!1.50e-09!129;UBERON:0007023!2.96e-09!115;UBERON:0004121!3.92e-09!169;UBERON:0000924!1.31e-08!173;UBERON:0006601!1.31e-08!173;UBERON:0001893!1.50e-08!34;UBERON:0002020!2.51e-08!34;UBERON:0003528!2.51e-08!34;UBERON:0002780!3.21e-08!41;UBERON:0001890!3.21e-08!41;UBERON:0006240!3.21e-08!41;UBERON:0003080!6.67e-08!42;UBERON:0002791!7.02e-08!33;UBERON:0002616!1.73e-07!59;UBERON:0002308!2.29e-07!9;UBERON:0000125!2.29e-07!9;UBERON:0001869!4.15e-07!32;UBERON:0003075!5.96e-07!86;UBERON:0007284!5.96e-07!86;UBERON:0001017!8.39e-07!82 | ||
|ontology_enrichment_uberon_v019=UBERON:0000486;1.24e-15;12!UBERON:0001949;2.50e-13;3!UBERON:0000365;8.40e-13;5!UBERON:0004815;2.67e-12;3!UBERON:0002031;2.67e-12;3!UBERON:0005910;1.12e-10;6!UBERON:0001708;3.25e-10;4!UBERON:0008895;3.25e-10;4!UBERON:0001911;1.77e-09;4!UBERON:0002419;2.69e-09;2!UBERON:0007771;2.69e-09;2!UBERON:0003297;2.69e-09;2!UBERON:0001821;2.69e-09;2!UBERON:0003487;2.69e-09;2!UBERON:0001820;2.69e-09;2!UBERON:0007196;7.77e-09;15!UBERON:0001558;7.77e-09;15!UBERON:0011159;3.05e-08;5!UBERON:0003729;1.17e-07;13!UBERON:0002185;1.51e-07;5!UBERON:0005911;2.30e-07;36!UBERON:0010371;3.14e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,2.50e-13,3;UBERON:0000365,9.07e-13,5;UBERON:0004815,2.57e-12,3;UBERON:0002031,2.57e-12,3;UBERON:0005910,1.19e-10,6;UBERON:0001708,3.25e-10,4;UBERON:0008895,3.25e-10,4;UBERON:0001911,1.75e-09,4;UBERON:0005333,1.75e-09,4;UBERON:0008425,1.75e-09,4;UBERON:0005311,1.75e-09,4;UBERON:0002419,2.70e-09,2;UBERON:0007771,2.70e-09,2;UBERON:0003297,2.70e-09,2;UBERON:0001821,2.70e-09,2;UBERON:0003487,2.70e-09,2;UBERON:0001820,2.70e-09,2;UBERON:0005089,2.70e-09,2;UBERON:0005088,2.70e-09,2;UBERON:0007196,7.49e-09,15;UBERON:0001558,7.49e-09,15;UBERON:0003102,7.66e-09,99;UBERON:0001004,2.33e-08,74;UBERON:0011159,3.05e-08,5;UBERON:0004119,5.70e-08,160;UBERON:0000925,5.70e-08,160;UBERON:0006595,5.70e-08,160;UBERON:0003729,1.16e-07,13;UBERON:0002185,1.48e-07,5;UBERON:0010188,6.37e-07,6;UBERON:0002539,6.37e-07,6;UBERON:0008816,6.37e-07,6 | |||
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| ||
|short_description=p@chr11:121421149..121421227,+ | |short_description=p@chr11:121421149..121421227,+ | ||
}} | }} |
Latest revision as of 19:13, 23 July 2015
Short description: | p@chr11:121421149..121421227, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:121421149..121421227, + |
Coexpression cluster: | C528_Gingival_Mallassezderived_Keratinocyte_Sebocyte_Prostate_Urothelial_Small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 2.50e-13 | 3 |
urothelium | 9.07e-13 | 5 |
lower respiratory tract epithelium | 2.57e-12 | 3 |
epithelium of bronchus | 2.57e-12 | 3 |
transitional epithelium | 1.19e-10 | 6 |
jaw skeleton | 3.25e-10 | 4 |
splanchnocranium | 3.25e-10 | 4 |
mammary gland | 1.75e-09 | 4 |
mammary bud | 1.75e-09 | 4 |
mammary ridge | 1.75e-09 | 4 |
mammary placode | 1.75e-09 | 4 |
skin gland | 2.70e-09 | 2 |
epidermis gland | 2.70e-09 | 2 |
gland of integumental system | 2.70e-09 | 2 |
sebaceous gland | 2.70e-09 | 2 |
skin sebaceous gland | 2.70e-09 | 2 |
sweat gland | 2.70e-09 | 2 |
sweat gland placode | 2.70e-09 | 2 |
sebaceous gland placode | 2.70e-09 | 2 |
tracheobronchial tree | 7.49e-09 | 15 |
lower respiratory tract | 7.49e-09 | 15 |
surface structure | 7.66e-09 | 99 |
respiratory system | 2.33e-08 | 74 |
primary subdivision of cranial skeletal system | 3.05e-08 | 5 |
endoderm-derived structure | 5.70e-08 | 160 |
endoderm | 5.70e-08 | 160 |
presumptive endoderm | 5.70e-08 | 160 |
mouth mucosa | 1.16e-07 | 13 |
bronchus | 1.48e-07 | 5 |
protuberance | 6.37e-07 | 6 |
pharyngeal arch | 6.37e-07 | 6 |
embryonic head | 6.37e-07 | 6 |