FFCP PHASE1:Hg19::chr11:2017929..2017975,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:2017929..2017975,+ | |||
|coexpression_cluster_id=C227 | |coexpression_cluster_id=C227 | ||
|description=CAGE_peak_at_chr11:2017929..2017975,+ | |description=CAGE_peak_at_chr11:2017929..2017975,+ | ||
|id=chr11:2017929..2017975,+ | |id=chr11:2017929..2017975,+ | ||
|ontology_enrichment_celltype=CL:0000349;4.01e-19;19!CL:0002577;1.60e-09;3!CL:0002541;5.73e-09;3!CL:0000515;6.50e-08;3!CL:0002564;2.42e-07;3 | |ontology_enrichment_celltype=CL:0000188!3.59e-08!9 | ||
| | |ontology_enrichment_celltype_v019=CL:0000349;4.01e-19;19!CL:0002577;1.60e-09;3!CL:0002541;5.73e-09;3!CL:0000515;6.50e-08;3!CL:0002564;2.42e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,4.40e-19,19;CL:0002577,1.61e-09,3;CL:0002541,6.64e-09,3;CL:0002564,2.26e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.76e-07;29 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0001737;8.30e-23;9!UBERON:0001557;8.30e-23;9!UBERON:0000478;7.44e-20;24!UBERON:0005631;4.88e-17;10!UBERON:0000158;4.88e-17;10!UBERON:0001134;9.62e-17;16!UBERON:0002036;9.62e-17;16!UBERON:0001987;8.82e-12;4!UBERON:0000305;3.49e-10;7!UBERON:0003124;5.73e-09;3!UBERON:0000920;5.73e-09;3!UBERON:0001723;1.41e-08;3!UBERON:0001033;1.41e-08;3!UBERON:0011135;2.09e-07;5!UBERON:0002216;2.09e-07;5!UBERON:0011134;2.09e-07;5!UBERON:0002209;2.09e-07;5!UBERON:0002213;2.09e-07;5!UBERON:0007844;2.09e-07;5!UBERON:0011138;2.09e-07;5!UBERON:0001130;2.09e-07;5!UBERON:0001066;2.09e-07;5!UBERON:0001468;2.09e-07;5!UBERON:0002385;2.25e-07;31!UBERON:0001015;2.25e-07;31!UBERON:0000383;2.25e-07;31!UBERON:0002242;2.42e-07;3 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!2.40e-14!14;UBERON:0000158!2.40e-14!14;UBERON:0001557!4.45e-13!19;UBERON:0001737!9.31e-13!9;UBERON:0003124!9.67e-11!7;UBERON:0000077!4.96e-10!130;UBERON:0000478!1.16e-09!24;UBERON:0003104!1.23e-09!238;UBERON:0009142!1.23e-09!238;UBERON:0001041!2.31e-09!98;UBERON:0004921!4.72e-09!129;UBERON:0004185!4.72e-09!129;UBERON:0004119!2.07e-08!169;UBERON:0000925!2.07e-08!169;UBERON:0006595!2.07e-08!169;UBERON:0001007!2.23e-07!155;UBERON:0001555!2.23e-07!155;UBERON:0007026!2.23e-07!155;UBERON:0000481!4.22e-07!347;UBERON:0001987!6.05e-07!4;UBERON:0004340!6.05e-07!4;UBERON:0004923!6.62e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;8.30e-23;9!UBERON:0001557;8.30e-23;9!UBERON:0000478;7.44e-20;24!UBERON:0005631;4.88e-17;10!UBERON:0000158;4.88e-17;10!UBERON:0001134;9.62e-17;16!UBERON:0002036;9.62e-17;16!UBERON:0001987;8.82e-12;4!UBERON:0000305;3.49e-10;7!UBERON:0003124;5.73e-09;3!UBERON:0000920;5.73e-09;3!UBERON:0001723;1.41e-08;3!UBERON:0001033;1.41e-08;3!UBERON:0011135;2.09e-07;5!UBERON:0002216;2.09e-07;5!UBERON:0011134;2.09e-07;5!UBERON:0002209;2.09e-07;5!UBERON:0002213;2.09e-07;5!UBERON:0007844;2.09e-07;5!UBERON:0011138;2.09e-07;5!UBERON:0001130;2.09e-07;5!UBERON:0001066;2.09e-07;5!UBERON:0001468;2.09e-07;5!UBERON:0002385;2.25e-07;31!UBERON:0001015;2.25e-07;31!UBERON:0000383;2.25e-07;31!UBERON:0002242;2.42e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,9.36e-27,14;UBERON:0000158,9.36e-27,14;UBERON:0001737,8.02e-23,9;UBERON:0000478,8.22e-20,24;UBERON:0003124,5.50e-19,7;UBERON:0001557,1.16e-17,19;UBERON:0001987,8.60e-12,4;UBERON:0004340,8.60e-12,4;UBERON:0000305,3.50e-10,7;UBERON:0000920,6.64e-09,3;UBERON:0004871,7.65e-09,8;UBERON:0001723,1.27e-08,3;UBERON:0001033,1.27e-08,3;UBERON:0010056,1.27e-08,3;UBERON:0000072,1.17e-07,47;UBERON:0011135,2.01e-07,5;UBERON:0002216,2.01e-07,5;UBERON:0011134,2.01e-07,5;UBERON:0002209,2.01e-07,5;UBERON:0002213,2.01e-07,5;UBERON:0005856,2.01e-07,5;UBERON:0005866,2.01e-07,5;UBERON:0005863,2.01e-07,5;UBERON:0007844,2.01e-07,5;UBERON:0011138,2.01e-07,5;UBERON:0001130,2.01e-07,5;UBERON:0001066,2.01e-07,5;UBERON:0001468,2.01e-07,5;UBERON:0002242,2.26e-07,3;UBERON:0003068,2.26e-07,3;UBERON:0002328,2.26e-07,3;UBERON:0004880,2.26e-07,3 | |||
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| ||
|short_description=p@chr11:2017929..2017975,+ | |short_description=p@chr11:2017929..2017975,+ | ||
}} | }} |
Latest revision as of 20:55, 23 July 2015
Short description: | p@chr11:2017929..2017975, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:2017929..2017975, + |
Coexpression cluster: | C227_chorionic_amniotic_Mesenchymal_Placental_gastric_diaphragm_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 4.40e-19 | 19 |
placental epithelial cell | 1.61e-09 | 3 |
chorionic membrane mesenchymal stem cell | 6.64e-09 | 3 |
nucleus pulposus cell of intervertebral disc | 2.26e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 9.36e-27 | 14 |
membranous layer | 9.36e-27 | 14 |
larynx | 8.02e-23 | 9 |
extraembryonic structure | 8.22e-20 | 24 |
chorion | 5.50e-19 | 7 |
upper respiratory tract | 1.16e-17 | 19 |
placenta | 8.60e-12 | 4 |
allantois | 8.60e-12 | 4 |
amnion | 3.50e-10 | 7 |
egg chorion | 6.64e-09 | 3 |
somatic layer of lateral plate mesoderm | 7.65e-09 | 8 |
tongue | 1.27e-08 | 3 |
gustatory system | 1.27e-08 | 3 |
future tongue | 1.27e-08 | 3 |
segment of respiratory tract | 1.17e-07 | 47 |
intervertebral cartilage | 2.01e-07 | 5 |
symphysis | 2.01e-07 | 5 |
nonsynovial joint | 2.01e-07 | 5 |
fibrous joint | 2.01e-07 | 5 |
cartilaginous joint | 2.01e-07 | 5 |
developing mesenchymal condensation | 2.01e-07 | 5 |
pre-cartilage condensation | 2.01e-07 | 5 |
cartilaginous condensation | 2.01e-07 | 5 |
cartilage element | 2.01e-07 | 5 |
post-cranial axial skeletal system | 2.01e-07 | 5 |
vertebral column | 2.01e-07 | 5 |
intervertebral disk | 2.01e-07 | 5 |
intervertebral joint | 2.01e-07 | 5 |
nucleus pulposus | 2.26e-07 | 3 |
axial mesoderm | 2.26e-07 | 3 |
notochord | 2.26e-07 | 3 |
chordamesoderm | 2.26e-07 | 3 |