FFCP PHASE1:Hg19::chr11:2154106..2154118,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-99bp_to_CU674261_5end | |association_with_transcript=-99bp_to_CU674261_5end | ||
|cluster_id=chr11:2154106..2154118,+ | |||
|coexpression_cluster_id=C172 | |||
|description=CAGE_peak_3_at_CU674261_5end | |description=CAGE_peak_3_at_CU674261_5end | ||
|id=chr11:2154106..2154118,+ | |id=chr11:2154106..2154118,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000349;4.90e-25;19!CL:0002541;1.74e-11;3!CL:0002575;1.03e-08;2!CL:0002536;1.59e-08;2!CL:0002549;2.61e-07;2!CL:0002537;3.63e-07;5!CL:0000182;5.69e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,5.55e-25,19;CL:0002541,2.35e-11,3;CL:0002575,1.03e-08,2;CL:0002536,1.59e-08,2;CL:0002549,3.08e-07,2;CL:0002537,3.56e-07,5;CL:0000182,5.62e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;7.57e-08;11 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.27e-13!14;UBERON:0000158!1.27e-13!14;UBERON:0000478!2.83e-12!24;UBERON:0003124!5.01e-10!7;UBERON:0000481!4.66e-09!347;UBERON:0004119!8.55e-08!169;UBERON:0000925!8.55e-08!169;UBERON:0006595!8.55e-08!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;4.60e-26;24!UBERON:0005631;2.61e-22;10!UBERON:0000158;2.61e-22;10!UBERON:0000305;4.07e-13;7!UBERON:0003124;1.74e-11;3!UBERON:0000920;1.74e-11;3!UBERON:0001987;2.18e-08;4!UBERON:0002107;6.30e-08;19!UBERON:0006925;6.30e-08;19!UBERON:0005629;2.61e-07;2!UBERON:0005358;2.61e-07;2!UBERON:0001886;2.61e-07;2!UBERON:0004086;2.61e-07;2!UBERON:0005282;2.61e-07;2!UBERON:0005281;2.61e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,7.49e-29,14;UBERON:0000158,7.49e-29,14;UBERON:0000478,5.51e-26,24;UBERON:0003124,1.46e-17,7;UBERON:0000305,3.98e-13,7;UBERON:0004871,1.95e-11,8;UBERON:0000920,2.35e-11,3;UBERON:0001987,2.45e-08,4;UBERON:0004340,2.45e-08,4;UBERON:0002107,6.75e-08,19;UBERON:0006925,6.75e-08,19;UBERON:0008836,6.75e-08,19;UBERON:0005629,3.08e-07,2;UBERON:0005358,3.08e-07,2;UBERON:0001886,3.08e-07,2;UBERON:0004086,3.08e-07,2;UBERON:0005282,3.08e-07,2;UBERON:0005281,3.08e-07,2 | |||
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| ||
|short_description=p3@CU674261 | |short_description=p3@CU674261 | ||
}} | }} |
Latest revision as of 21:01, 23 July 2015
Short description: | p3@CU674261 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CU674261_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | -99bp_to_CU674261_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 5.55e-25 | 19 |
chorionic membrane mesenchymal stem cell | 2.35e-11 | 3 |
central nervous system pericyte | 1.03e-08 | 2 |
amniotic epithelial cell | 1.59e-08 | 2 |
fibroblast of choroid plexus | 3.08e-07 | 2 |
amnion mesenchymal stem cell | 3.56e-07 | 5 |
hepatocyte | 5.62e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 7.49e-29 | 14 |
membranous layer | 7.49e-29 | 14 |
extraembryonic structure | 5.51e-26 | 24 |
chorion | 1.46e-17 | 7 |
amnion | 3.98e-13 | 7 |
somatic layer of lateral plate mesoderm | 1.95e-11 | 8 |
egg chorion | 2.35e-11 | 3 |
placenta | 2.45e-08 | 4 |
allantois | 2.45e-08 | 4 |
liver | 6.75e-08 | 19 |
digestive gland | 6.75e-08 | 19 |
liver bud | 6.75e-08 | 19 |
vascular plexus | 3.08e-07 | 2 |
ventricle of nervous system | 3.08e-07 | 2 |
choroid plexus | 3.08e-07 | 2 |
brain ventricle | 3.08e-07 | 2 |
ventricular system of brain | 3.08e-07 | 2 |
ventricular system of central nervous system | 3.08e-07 | 2 |