FFCP PHASE1:Hg19::chr11:28782547..28782558,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:28782547..28782558,+ | |||
|description=CAGE_peak_at_chr11:28782547..28782558,+ | |description=CAGE_peak_at_chr11:28782547..28782558,+ | ||
|id=chr11:28782547..28782558,+ | |id=chr11:28782547..28782558,+ | ||
|ontology_enrichment_celltype=CL:0000077!3.07e-12!19;CL:0000066!2.40e-10!254;CL:0000064!1.95e-09!3;CL:0005012!1.95e-09!3;CL:0000067!1.95e-09!3;CL:0002304!1.95e-09!3;CL:0000239!1.76e-08!3;CL:1000615!1.76e-08!3;CL:0002306!1.76e-08!3;CL:1000497!5.74e-08!18;CL:0002518!5.74e-08!18;CL:0000075!7.39e-08!27;CL:1000449!5.74e-07!16 | |ontology_enrichment_celltype=CL:0000077!3.07e-12!19;CL:0000066!2.40e-10!254;CL:0000064!1.95e-09!3;CL:0005012!1.95e-09!3;CL:0000067!1.95e-09!3;CL:0002304!1.95e-09!3;CL:0000239!1.76e-08!3;CL:1000615!1.76e-08!3;CL:0002306!1.76e-08!3;CL:1000497!5.74e-08!18;CL:0002518!5.74e-08!18;CL:0000075!7.39e-08!27;CL:1000449!5.74e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0000064;1.90e-26;3!CL:0000067;1.90e-26;3!CL:0005012;1.90e-26;3!CL:0002304;1.90e-26;3!CL:0000077;8.04e-21;19!CL:0000342;7.18e-10;1!CL:0002565;7.18e-10;1!CL:0000319;1.83e-09;1!CL:0000306;2.57e-09;4!CL:0002222;2.57e-09;4!CL:0002224;2.57e-09;4!CL:0000075;9.76e-08;27 | |ontology_enrichment_celltype_v019=CL:0000064;1.90e-26;3!CL:0000067;1.90e-26;3!CL:0005012;1.90e-26;3!CL:0002304;1.90e-26;3!CL:0000077;8.04e-21;19!CL:0000342;7.18e-10;1!CL:0002565;7.18e-10;1!CL:0000319;1.83e-09;1!CL:0000306;2.57e-09;4!CL:0002222;2.57e-09;4!CL:0002224;2.57e-09;4!CL:0000075;9.76e-08;27 | ||
|ontology_enrichment_celltype_v019_2=CL:0000064,1.74e-26,3;CL:0000067,1.74e-26,3;CL:0005012,1.74e-26,3;CL:0002304,1.74e-26,3;CL:0000077,8.55e-21,19;CL:0000066,1.73e-12,253;CL:0000342,7.50e-10,1;CL:0002565,7.50e-10,1;CL:0000319,1.62e-09,1;CL:0000306,2.57e-09,4;CL:0002222,2.57e-09,4;CL:0002224,2.57e-09,4;CL:0000213,3.90e-08,58;CL:0000215,3.90e-08,58;CL:0000075,9.62e-08,27;CL:0000076,2.04e-07,63 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:14566!3.34e-07!239;DOID:162!5.98e-07!235 | |ontology_enrichment_disease=DOID:14566!3.34e-07!239;DOID:162!5.98e-07!235 | ||
|ontology_enrichment_disease_v019=DOID:3030;1.83e-09;1!DOID:3571;1.83e-09;1 | |ontology_enrichment_disease_v019=DOID:3030;1.83e-09;1!DOID:3571;1.83e-09;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3030,1.62e-09,1;DOID:3571,2.46e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0000488!5.69e-12!4;UBERON:0007625!7.27e-12!11;UBERON:0001778!1.95e-09!3;UBERON:0001775!1.95e-09!3;UBERON:0000353!1.50e-08!17;UBERON:0006853!1.76e-08!3;UBERON:0007685!1.76e-08!3;UBERON:0004134!1.76e-08!3;UBERON:0002203!6.24e-08!6;UBERON:0001768!6.24e-08!6;UBERON:0004211!5.74e-07!16;UBERON:0001285!5.74e-07!16;UBERON:0007684!5.74e-07!16;UBERON:0003220!5.74e-07!16;UBERON:0004208!5.74e-07!16;UBERON:0001851!6.78e-07!16;UBERON:0001801!9.83e-07!14 | |ontology_enrichment_uberon=UBERON:0000488!5.69e-12!4;UBERON:0007625!7.27e-12!11;UBERON:0001778!1.95e-09!3;UBERON:0001775!1.95e-09!3;UBERON:0000353!1.50e-08!17;UBERON:0006853!1.76e-08!3;UBERON:0007685!1.76e-08!3;UBERON:0004134!1.76e-08!3;UBERON:0002203!6.24e-08!6;UBERON:0001768!6.24e-08!6;UBERON:0004211!5.74e-07!16;UBERON:0001285!5.74e-07!16;UBERON:0007684!5.74e-07!16;UBERON:0003220!5.74e-07!16;UBERON:0004208!5.74e-07!16;UBERON:0001851!6.78e-07!16;UBERON:0001801!9.83e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0007625;8.72e-37;11!UBERON:0000488;1.56e-34;4!UBERON:0001778;1.90e-26;3!UBERON:0001775;1.90e-26;3!UBERON:0002203;3.94e-23;6!UBERON:0001768;3.94e-23;6!UBERON:0002200;3.94e-23;6!UBERON:0001801;2.02e-21;14!UBERON:0000019;5.11e-21;19!UBERON:0000047;5.11e-21;19!UBERON:0004088;5.11e-21;19!UBERON:0010230;5.11e-21;19!UBERON:0000970;6.23e-20;20!UBERON:0002104;5.99e-19;21!UBERON:0001456;5.99e-19;21!UBERON:0000020;3.07e-17;23!UBERON:0001032;1.72e-16;24!UBERON:0004456;1.72e-16;24!UBERON:0006876;1.01e-12;11!UBERON:0010371;2.31e-12;31!UBERON:0002506;7.18e-10;1!UBERON:0001769;7.18e-10;1!UBERON:0010077;2.57e-09;4!UBERON:0005389;2.57e-09;4!UBERON:0000484;2.57e-09;4!UBERON:0000965;2.57e-09;4!UBERON:0001803;2.57e-09;4 | |ontology_enrichment_uberon_v019=UBERON:0007625;8.72e-37;11!UBERON:0000488;1.56e-34;4!UBERON:0001778;1.90e-26;3!UBERON:0001775;1.90e-26;3!UBERON:0002203;3.94e-23;6!UBERON:0001768;3.94e-23;6!UBERON:0002200;3.94e-23;6!UBERON:0001801;2.02e-21;14!UBERON:0000019;5.11e-21;19!UBERON:0000047;5.11e-21;19!UBERON:0004088;5.11e-21;19!UBERON:0010230;5.11e-21;19!UBERON:0000970;6.23e-20;20!UBERON:0002104;5.99e-19;21!UBERON:0001456;5.99e-19;21!UBERON:0000020;3.07e-17;23!UBERON:0001032;1.72e-16;24!UBERON:0004456;1.72e-16;24!UBERON:0006876;1.01e-12;11!UBERON:0010371;2.31e-12;31!UBERON:0002506;7.18e-10;1!UBERON:0001769;7.18e-10;1!UBERON:0010077;2.57e-09;4!UBERON:0005389;2.57e-09;4!UBERON:0000484;2.57e-09;4!UBERON:0000965;2.57e-09;4!UBERON:0001803;2.57e-09;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,6.69e-37,11;UBERON:0000488,1.50e-34,4;UBERON:0001778,1.74e-26,3;UBERON:0001775,1.74e-26,3;UBERON:0002203,3.84e-23,6;UBERON:0001768,3.84e-23,6;UBERON:0002200,3.84e-23,6;UBERON:0001801,1.98e-21,14;UBERON:0000019,5.40e-20,20;UBERON:0000047,5.40e-20,20;UBERON:0010312,5.40e-20,20;UBERON:0004088,5.40e-20,20;UBERON:0010230,5.40e-20,20;UBERON:0003072,5.40e-20,20;UBERON:0004128,5.40e-20,20;UBERON:0003071,5.40e-20,20;UBERON:0000970,5.23e-19,21;UBERON:0002104,5.23e-19,21;UBERON:0001456,4.12e-18,22;UBERON:0000020,1.53e-16,24;UBERON:0001032,1.53e-16,24;UBERON:0004456,1.53e-16,24;UBERON:0006876,1.00e-12,11;UBERON:0005085,1.23e-12,31;UBERON:0002506,7.50e-10,1;UBERON:0001769,7.50e-10,1;UBERON:0010077,2.57e-09,4;UBERON:0005389,2.57e-09,4;UBERON:0000484,2.57e-09,4;UBERON:0002546,2.57e-09,4;UBERON:0000965,2.57e-09,4;UBERON:0001803,2.57e-09,4;UBERON:0003073,2.57e-09,4;UBERON:0005426,2.57e-09,4;UBERON:0001444,1.04e-07,49 | |||
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| ||
|short_description=p@chr11:28782547..28782558,+ | |short_description=p@chr11:28782547..28782558,+ | ||
}} | }} |
Latest revision as of 21:21, 23 July 2015
Short description: | p@chr11:28782547..28782558, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:28782547..28782558, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 1.74e-26 | 3 |
ciliated epithelial cell | 1.74e-26 | 3 |
multi-ciliated epithelial cell | 1.74e-26 | 3 |
non-pigmented ciliary epithelial cell | 1.74e-26 | 3 |
mesothelial cell | 8.55e-21 | 19 |
epithelial cell | 1.73e-12 | 253 |
pigment cell (sensu Vertebrata) | 7.50e-10 | 1 |
iris pigment epithelial cell | 7.50e-10 | 1 |
mucus secreting cell | 1.62e-09 | 1 |
crystallin accumulating cell | 2.57e-09 | 4 |
vertebrate lens cell | 2.57e-09 | 4 |
lens epithelial cell | 2.57e-09 | 4 |
lining cell | 3.90e-08 | 58 |
barrier cell | 3.90e-08 | 58 |
columnar/cuboidal epithelial cell | 9.62e-08 | 27 |
squamous epithelial cell | 2.04e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
pigment epithelium of eye | 6.69e-37 | 11 |
atypical epithelium | 1.50e-34 | 4 |
ciliary epithelium | 1.74e-26 | 3 |
ciliary body | 1.74e-26 | 3 |
vasculature of eye | 3.84e-23 | 6 |
uvea | 3.84e-23 | 6 |
vasculature of head | 3.84e-23 | 6 |
anterior segment of eyeball | 1.98e-21 | 14 |
camera-type eye | 5.40e-20 | 20 |
simple eye | 5.40e-20 | 20 |
immature eye | 5.40e-20 | 20 |
ocular region | 5.40e-20 | 20 |
eyeball of camera-type eye | 5.40e-20 | 20 |
optic cup | 5.40e-20 | 20 |
optic vesicle | 5.40e-20 | 20 |
eye primordium | 5.40e-20 | 20 |
eye | 5.23e-19 | 21 |
visual system | 5.23e-19 | 21 |
face | 4.12e-18 | 22 |
sense organ | 1.53e-16 | 24 |
sensory system | 1.53e-16 | 24 |
entire sense organ system | 1.53e-16 | 24 |
vasculature of organ | 1.00e-12 | 11 |
ectodermal placode | 1.23e-12 | 31 |
iris epithelium | 7.50e-10 | 1 |
iris | 7.50e-10 | 1 |
cuboidal epithelium | 2.57e-09 | 4 |
transparent eye structure | 2.57e-09 | 4 |
simple cuboidal epithelium | 2.57e-09 | 4 |
cranial placode | 2.57e-09 | 4 |
lens of camera-type eye | 2.57e-09 | 4 |
epithelium of lens | 2.57e-09 | 4 |
lens placode | 2.57e-09 | 4 |
lens vesicle | 2.57e-09 | 4 |
subdivision of head | 1.04e-07 | 49 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 1.62e-09 | 1 |
liver cancer | 2.46e-09 | 1 |