FFCP PHASE1:Hg19::chr11:329487..329504,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:329487..329504,- | |||
|description=CAGE_peak_at_chr11:329487..329504,- | |description=CAGE_peak_at_chr11:329487..329504,- | ||
|id=chr11:329487..329504,- | |id=chr11:329487..329504,- | ||
|ontology_enrichment_celltype=CL:0000838!4.42e-08!52;CL:0000542!7.23e-08!53;CL:0000051!7.23e-08!53 | |ontology_enrichment_celltype=CL:0000838!4.42e-08!52;CL:0000542!7.23e-08!53;CL:0000051!7.23e-08!53 | ||
|ontology_enrichment_celltype_v019=CL:0002379;2.54e-21;1!CL:0002127;5.71e-21;1!CL:0000911;5.71e-21;1!CL:0000814;5.71e-21;1!CL:0000084;6.84e-20;25!CL:0000542;1.36e-09;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0002379,2.30e-21,1;CL:0002127,3.45e-21,1;CL:0000914,3.45e-21,1;CL:0000911,3.45e-21,1;CL:0000814,3.45e-21,1;CL:0002042,3.45e-21,1;CL:0002039,3.45e-21,1;CL:0002040,3.45e-21,1;CL:0002041,3.45e-21,1;CL:0000084,6.57e-20,25;CL:0000827,6.57e-20,25;CL:0000838,1.16e-13,52;CL:0000542,2.10e-13,53;CL:0000051,2.10e-13,53;CL:0000893,2.73e-11,2;CL:0002489,2.73e-11,2;CL:0000809,2.73e-11,2;CL:0000808,2.73e-11,2;CL:0000894,2.73e-11,2;CL:0000806,2.73e-11,2;CL:0000807,2.73e-11,2;CL:0000805,2.73e-11,2;CL:0002425,2.73e-11,2 | |||
|ontology_enrichment_development_v019=CL:0002425;3.52e-11;2!CL:0000051;1.36e-09;53 | |||
|ontology_enrichment_disease=DOID:2531!1.44e-18!51;DOID:0060083!1.44e-18!51;DOID:1036!7.17e-18!8;DOID:1240!4.48e-12!39;DOID:0060058!2.96e-10!10;DOID:162!2.10e-09!235;DOID:0050686!2.25e-09!137;DOID:14566!5.18e-09!239 | |||
|ontology_enrichment_disease_v019=DOID:3620;2.54e-21;1!DOID:3565;2.54e-21;1!DOID:2355;2.54e-21;1!DOID:2531;2.16e-15;51!DOID:0060083;2.16e-15;51!DOID:1240;5.10e-13;39!DOID:74;2.35e-11;2!DOID:0060058;5.04e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,2.30e-21,1;DOID:3565,2.30e-21,1;DOID:2355,2.82e-21,1;DOID:2531,8.61e-19,51;DOID:0060083,8.61e-19,51;DOID:1240,3.50e-18,39;DOID:74,2.47e-11,2;DOID:0060058,5.15e-09,10;DOID:0050686,7.65e-09,137 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0,0.393553906568396,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264145302039678,0,0,0.75745460055828,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79336230389644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35169502361987,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,1.4098700508785,0,0,0,5.01495229248653,0,0,0,0,0,0,0,0.494411622680279,0,0,0,0,0,0.738508832766417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0.179515288819544,0,0,0.0915975934018623,0.533034776018635,1.02193298195737,0,0,0.902382642468723,0.980312671588698,0.503464760927528,0.37950746544837,0.317873157960757,0,0,0.141353071433941,0,0,0,0,0.296521128680622,0.123563938946503,0.208843899010911,0,0,0,0.364909578431332,0,0,0,0,0,0.063186579628488,0.901940516486955,0.518440956986236,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57732412567589,0,0,0,0,0,0,0,0,0,0.630265458457789,0.164831716762333,0.337017719270924,0,2.03215996957883,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11739237728355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0.231522474323834,3.67105056759701,0,0,0,0,0.38582807654183,0,0,0,0,0,0,0,0,0,0,0,0,0,0.861074898304078,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158013611732727,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0,0.0918948995348449,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0,0.393553906568396,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264145302039678,0,0,0.75745460055828,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79336230389644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35169502361987,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,1.4098700508785,0,0,0,5.01495229248653,0,0,0,0,0,0,0,0.494411622680279,0,0,0,0,0,0.738508832766417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0.179515288819544,0,0,0.0915975934018623,0.533034776018635,1.02193298195737,0,0,0.902382642468723,0.980312671588698,0.503464760927528,0.37950746544837,0.317873157960757,0,0,0.141353071433941,0,0,0,0,0.296521128680622,0.123563938946503,0.208843899010911,0,0,0,0.364909578431332,0,0,0,0,0,0.063186579628488,0.901940516486955,0.518440956986236,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57732412567589,0,0,0,0,0,0,0,0,0,0.630265458457789,0.164831716762333,0.337017719270924,0,2.03215996957883,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11739237728355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0.231522474323834,3.67105056759701,0,0,0,0,0.38582807654183,0,0,0,0,0,0,0,0,0,0,0,0,0,0.861074898304078,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158013611732727,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0,0.0918948995348449,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:329487..329504,- | |short_description=p@chr11:329487..329504,- | ||
}} | }} |
Latest revision as of 21:35, 23 July 2015
Short description: | p@chr11:329487..329504, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:329487..329504, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meningothelial cell | 2.30e-21 | 1 |
innate effector T cell | 3.45e-21 | 1 |
immature NK T cell | 3.45e-21 | 1 |
effector T cell | 3.45e-21 | 1 |
mature NK T cell | 3.45e-21 | 1 |
immature NK T cell stage IV | 3.45e-21 | 1 |
immature NK T cell stage I | 3.45e-21 | 1 |
immature NK T cell stage II | 3.45e-21 | 1 |
immature NK T cell stage III | 3.45e-21 | 1 |
T cell | 6.57e-20 | 25 |
pro-T cell | 6.57e-20 | 25 |
lymphoid lineage restricted progenitor cell | 1.16e-13 | 52 |
lymphocyte | 2.10e-13 | 53 |
common lymphoid progenitor | 2.10e-13 | 53 |
thymocyte | 2.73e-11 | 2 |
double negative thymocyte | 2.73e-11 | 2 |
double-positive, alpha-beta thymocyte | 2.73e-11 | 2 |
DN4 thymocyte | 2.73e-11 | 2 |
DN1 thymic pro-T cell | 2.73e-11 | 2 |
DN2 thymocyte | 2.73e-11 | 2 |
DN3 thymocyte | 2.73e-11 | 2 |
immature single positive thymocyte | 2.73e-11 | 2 |
early T lineage precursor | 2.73e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 2.30e-21 | 1 |
meningioma | 2.30e-21 | 1 |
anemia | 2.82e-21 | 1 |
hematologic cancer | 8.61e-19 | 51 |
immune system cancer | 8.61e-19 | 51 |
leukemia | 3.50e-18 | 39 |
hematopoietic system disease | 2.47e-11 | 2 |
lymphoma | 5.15e-09 | 10 |
organ system cancer | 7.65e-09 | 137 |