FFCP PHASE1:Hg19::chr11:60680219..60680235,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:60680219..60680235,+ | |||
|coexpression_cluster_id=C1144 | |||
|description=CAGE_peak_at_chr11:60680219..60680235,+ | |||
|id=chr11:60680219..60680235,+ | |||
|ontology_enrichment_celltype=CL:0000708!1.15e-19!3;CL:0000342!2.67e-07!1;CL:0002565!2.67e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000708;3.48e-118;3!CL:0000327;1.52e-24;15!CL:0002549;5.69e-21;2!CL:0002590;1.83e-14;3!CL:0000499;1.40e-13;28!CL:0000151;4.59e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000708,3.48e-118,3;CL:0000327,1.52e-24,15;CL:0002549,6.96e-21,2;CL:0002590,1.60e-14,3;CL:0000499,1.40e-13,28;CL:0000151,9.52e-11,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003210!1.15e-19!3;UBERON:0003075!6.88e-16!86;UBERON:0007284!6.88e-16!86;UBERON:0005743!9.35e-16!86;UBERON:0002346!4.92e-15!90;UBERON:0001017!1.33e-14!82;UBERON:0000073!5.77e-14!94;UBERON:0001016!5.77e-14!94;UBERON:0002616!6.13e-14!59;UBERON:0000955!2.50e-13!69;UBERON:0006238!2.50e-13!69;UBERON:0001049!3.64e-12!57;UBERON:0005068!3.64e-12!57;UBERON:0006241!3.64e-12!57;UBERON:0007135!3.64e-12!57;UBERON:0000153!3.97e-12!129;UBERON:0007811!3.97e-12!129;UBERON:0000033!1.98e-11!123;UBERON:0003056!2.92e-11!61;UBERON:0004121!1.63e-09!169;UBERON:0000924!3.33e-09!173;UBERON:0006601!3.33e-09!173;UBERON:0002200!3.81e-09!11;UBERON:0006876!3.81e-09!11;UBERON:0001869!9.15e-08!32;UBERON:0002780!1.01e-07!41;UBERON:0001890!1.01e-07!41;UBERON:0006240!1.01e-07!41;UBERON:0003080!1.62e-07!42;UBERON:0002506!2.67e-07!1;UBERON:0001769!2.67e-07!1;UBERON:0001893!2.84e-07!34;UBERON:0001874!2.84e-07!1;UBERON:0007023!5.05e-07!115;UBERON:0002902!5.19e-07!1;UBERON:0009899!5.19e-07!1;UBERON:0007190!5.84e-07!1;UBERON:0000488!5.86e-07!4;UBERON:0001882!6.20e-07!1;UBERON:0005403!6.20e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0003210;3.48e-118;3!UBERON:0005284;2.34e-32;5!UBERON:0005629;5.69e-21;2!UBERON:0005358;5.69e-21;2!UBERON:0001886;5.69e-21;2!UBERON:0004086;5.69e-21;2!UBERON:0005282;5.69e-21;2!UBERON:0005281;5.69e-21;2!UBERON:0006876;2.33e-15;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003210,3.48e-118,3;UBERON:0005284,2.34e-32,5;UBERON:0005629,6.96e-21,2;UBERON:0005358,6.96e-21,2;UBERON:0001886,6.96e-21,2;UBERON:0004086,6.96e-21,2;UBERON:0005282,6.96e-21,2;UBERON:0005281,6.96e-21,2;UBERON:0006876,2.33e-15,11 | |||
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|short_description=p@chr11:60680219..60680235,+ | |||
}} | }} |
Latest revision as of 23:18, 23 July 2015
Short description: | p@chr11:60680219..60680235, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:60680219..60680235, + |
Coexpression cluster: | C1144_Meningeal_Fibroblast_mesenchymal_ductal_Smooth_Preadipocyte_Pericytes |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leptomeningeal cell | 3.48e-118 | 3 |
extracellular matrix secreting cell | 1.52e-24 | 15 |
fibroblast of choroid plexus | 6.96e-21 | 2 |
smooth muscle cell of the brain vasculature | 1.60e-14 | 3 |
stromal cell | 1.40e-13 | 28 |
secretory cell | 9.52e-11 | 36 |
Ontology term | p-value | n |
---|---|---|
blood-cerebrospinal fluid barrier | 3.48e-118 | 3 |
brain vasculature | 2.34e-32 | 5 |
vascular plexus | 6.96e-21 | 2 |
ventricle of nervous system | 6.96e-21 | 2 |
choroid plexus | 6.96e-21 | 2 |
brain ventricle | 6.96e-21 | 2 |
ventricular system of brain | 6.96e-21 | 2 |
ventricular system of central nervous system | 6.96e-21 | 2 |
vasculature of organ | 2.33e-15 | 11 |