FFCP PHASE1:Hg19::chr11:61634723..61634731,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:61634723..61634731,+ | |||
|coexpression_cluster_id=C368 | |||
|description=CAGE_peak_at_chr11:61634723..61634731,+ | |||
|id=chr11:61634723..61634731,+ | |||
|ontology_enrichment_celltype=CL:0000669!1.16e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0000669;2.22e-40;4!CL:0002575;3.11e-21;2!CL:0000650;5.69e-21;2!CL:1000500;5.69e-21;2!CL:1000618;5.69e-21;2!CL:1001318;5.69e-21;2!CL:0002173;5.69e-21;2!CL:0002593;5.69e-21;2!CL:0002367;5.69e-21;2!CL:0002595;3.22e-09;5!CL:1000746;6.04e-07;7!CL:1000612;6.04e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000669,2.22e-40,4;CL:0002575,3.11e-21,2;CL:0002367,4.66e-21,2;CL:0000650,5.70e-21,2;CL:1000500,5.70e-21,2;CL:1000618,5.70e-21,2;CL:1001318,5.70e-21,2;CL:0002173,5.70e-21,2;CL:0002593,6.96e-21,2;CL:0002595,3.49e-09,5;CL:1000746,6.04e-07,7;CL:1000612,6.04e-07,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000988!1.82e-07!3;UBERON:0003076!9.81e-07!15;UBERON:0003057!9.81e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0003567;5.69e-21;2!UBERON:0003838;5.69e-21;2!UBERON:0003586;5.69e-21;2!UBERON:0005169;5.69e-21;2!UBERON:0002321;5.69e-21;2!UBERON:0005969;5.69e-21;2!UBERON:0002456;5.69e-21;2!UBERON:0005215;5.69e-21;2!UBERON:0002303;5.69e-21;2!UBERON:0002319;5.69e-21;2!UBERON:0003956;5.69e-21;2!UBERON:0003891;3.42e-11;4!UBERON:0003834;3.22e-09;5!UBERON:0001533;3.22e-09;5!UBERON:0002203;6.78e-08;6!UBERON:0001768;6.78e-08;6!UBERON:0002200;6.78e-08;6!UBERON:0003513;6.04e-07;7!UBERON:0000074;6.04e-07;7!UBERON:0001229;6.04e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005969,4.66e-21,2;UBERON:0003956,4.66e-21,2;UBERON:0003567,5.70e-21,2;UBERON:0003838,5.70e-21,2;UBERON:0003586,5.70e-21,2;UBERON:0005169,5.70e-21,2;UBERON:0002321,5.70e-21,2;UBERON:0005215,5.70e-21,2;UBERON:0002303,5.70e-21,2;UBERON:0002319,5.70e-21,2;UBERON:0002456,6.96e-21,2;UBERON:0003891,3.42e-11,4;UBERON:0003834,3.49e-09,5;UBERON:0001533,3.49e-09,5;UBERON:0002203,6.34e-08,6;UBERON:0001768,6.34e-08,6;UBERON:0002200,6.34e-08,6;UBERON:0010532,6.04e-07,7;UBERON:0000074,6.04e-07,7;UBERON:0001229,6.04e-07,7;UBERON:0001230,6.04e-07,7;UBERON:0003220,6.04e-07,7;UBERON:0005749,6.04e-07,7;UBERON:0004199,6.04e-07,7;UBERON:0004209,6.04e-07,7;UBERON:0004198,6.04e-07,7;UBERON:0003513,6.39e-07,7 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0.655324116390517,0,0,0,0,0,0,0,0.738726348460727,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0.605429710579726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0.386521706326594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,3.57656445851882,0,0.26593811658487,0,0.257207374262142,0,0.266422179016099,0.428933980974443,0.542621605391443,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,5.286631251494,0.343143423810856,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,1.08378575017541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275673144969061,0.322260734604821,0,0,0,0,0,0.255225424989168,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0.511795582622668,0,0,0,0,0,0,0,0,0,0,0,1.05650146756755,0.272999822815972,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,1.13841952129715,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318852545457645,0.199579371432817,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0.325942115766024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202203398942031,0,0,0,0,0,0,0,0.61214552326098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407712618220842,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.39669780522807,0.171086837884329,0,0,0,0,0,0,0.487170393523584,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0.214441591374926,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0.0679697329768317,0.131545547125698,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0.118332000730565,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0.0679914901909147,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0,0,0,0.310298987585686,0,0,0.0645889098360061,0,0,0.0636471582781649,0,0,0,0,0,0,0,0.213454691755431,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:61634723..61634731,+ | |||
}} |
Latest revision as of 23:32, 23 July 2015
Short description: | p@chr11:61634723..61634731, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:61634723..61634731, + |
Coexpression cluster: | C368_Pericytes_Fibroblast_Nucleus_Anulus_Meningeal_Mesenchymal_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pericyte cell | 2.22e-40 | 4 |
central nervous system pericyte | 3.11e-21 | 2 |
trabecular meshwork cell | 4.66e-21 | 2 |
mesangial cell | 5.70e-21 | 2 |
kidney interstitial cell | 5.70e-21 | 2 |
juxtaglomerular complex cell | 5.70e-21 | 2 |
renal interstitial pericyte | 5.70e-21 | 2 |
extraglomerular mesangial cell | 5.70e-21 | 2 |
smooth muscle cell of the internal thoracic artery | 6.96e-21 | 2 |
smooth muscle cell of the subclavian artery | 3.49e-09 | 5 |
glomerular cell | 6.04e-07 | 7 |
kidney corpuscule cell | 6.04e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
reticulum trabeculare | 4.66e-21 | 2 |
aqueous drainage system | 4.66e-21 | 2 |
abdomen connective tissue | 5.70e-21 | 2 |
abdominal segment connective tissue | 5.70e-21 | 2 |
trunk connective tissue | 5.70e-21 | 2 |
interstitial tissue | 5.70e-21 | 2 |
extraglomerular mesangium | 5.70e-21 | 2 |
kidney interstitium | 5.70e-21 | 2 |
juxtaglomerular apparatus | 5.70e-21 | 2 |
mesangium | 5.70e-21 | 2 |
internal thoracic artery | 6.96e-21 | 2 |
stroma | 3.42e-11 | 4 |
thoracic segment blood vessel | 3.49e-09 | 5 |
subclavian artery | 3.49e-09 | 5 |
vasculature of eye | 6.34e-08 | 6 |
uvea | 6.34e-08 | 6 |
vasculature of head | 6.34e-08 | 6 |
primitive nephron | 6.04e-07 | 7 |
renal glomerulus | 6.04e-07 | 7 |
renal corpuscle | 6.04e-07 | 7 |
glomerular capsule | 6.04e-07 | 7 |
metanephric mesenchyme | 6.04e-07 | 7 |
glomerular tuft | 6.04e-07 | 7 |
S-shaped body | 6.04e-07 | 7 |
renal vesicle | 6.04e-07 | 7 |
comma-shaped body | 6.04e-07 | 7 |
trunk blood vessel | 6.39e-07 | 7 |