FFCP PHASE1:Hg19::chr11:619513..619533,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:619513..619533,- | |||
|coexpression_cluster_id=C25 | |coexpression_cluster_id=C25 | ||
|description=CAGE_peak_at_chr11:619513..619533,- | |description=CAGE_peak_at_chr11:619513..619533,- | ||
|id=chr11:619513..619533,- | |id=chr11:619513..619533,- | ||
|ontology_enrichment_celltype=CL:0002231;7.76e-08;3!CL:0000182;1.54e-07;12 | |ontology_enrichment_celltype=CL:0000181!3.79e-14!12;CL:0000417!3.79e-14!12;CL:0000668!3.79e-14!12;CL:0000414!3.79e-14!12;CL:0000412!3.79e-14!12;CL:0000182!3.79e-14!12;CL:0000080!9.39e-11!6;CL:0002563!5.64e-08!4 | ||
| | |ontology_enrichment_celltype_v019=CL:0002231;7.76e-08;3!CL:0000182;1.54e-07;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0002231,8.29e-08,3;CL:0000182,1.47e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0000160;1.34e-39;17!UBERON:0002108;9.69e-37;4!UBERON:0005409;5.00e-31;22!UBERON:0004921;5.45e-19;33!UBERON:0001155;9.44e-10;9!UBERON:0001007;4.76e-09;81!UBERON:0001555;2.83e-08;54!UBERON:0000059;3.83e-08;11!UBERON:0002114;5.18e-08;2 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!3.29e-15!27;UBERON:0009854!7.74e-14!23;UBERON:0009497!1.09e-12!25;UBERON:0000015!1.09e-12!25;UBERON:0002423!1.09e-12!25;UBERON:0006235!1.09e-12!25;UBERON:0004161!1.09e-12!25;UBERON:0001155!1.10e-12!9;UBERON:0002107!1.46e-12!19;UBERON:0006925!1.46e-12!19;UBERON:0008836!1.46e-12!19;UBERON:0009856!3.78e-12!26;UBERON:0005409!1.42e-11!35;UBERON:0003929!3.95e-11!54;UBERON:0008835!8.81e-11!22;UBERON:0003894!8.81e-11!22;UBERON:0004921!1.29e-10!129;UBERON:0004185!1.29e-10!129;UBERON:0000059!2.10e-10!11;UBERON:0001007!1.36e-09!155;UBERON:0001555!1.36e-09!155;UBERON:0007026!1.36e-09!155;UBERON:0007499!2.00e-09!25;UBERON:0005057!4.82e-09!26;UBERON:0005172!1.07e-08!55;UBERON:0005173!1.07e-08!55;UBERON:0004119!1.57e-08!169;UBERON:0000925!1.57e-08!169;UBERON:0006595!1.57e-08!169;UBERON:0007029!2.69e-08!1;UBERON:0001154!3.57e-08!1;UBERON:0001153!3.57e-08!1;UBERON:0001242!5.64e-08!4;UBERON:0001262!5.64e-08!4;UBERON:0004786!5.64e-08!4;UBERON:0004808!5.64e-08!4;UBERON:0001277!5.64e-08!4;UBERON:0002417!1.05e-07!61;UBERON:0000916!1.05e-07!61;UBERON:0002365!1.69e-07!31;UBERON:0002330!1.69e-07!31;UBERON:0005911!9.11e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.34e-39;17!UBERON:0002108;9.69e-37;4!UBERON:0005409;5.00e-31;22!UBERON:0004921;5.45e-19;33!UBERON:0001155;9.44e-10;9!UBERON:0001007;4.76e-09;81!UBERON:0001555;2.83e-08;54!UBERON:0000059;3.83e-08;11!UBERON:0002114;5.18e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.34e-39,17;UBERON:0002108,9.70e-37,4;UBERON:0005409,1.84e-27,25;UBERON:0004921,4.23e-13,118;UBERON:0001007,1.36e-10,145;UBERON:0001555,1.36e-10,145;UBERON:0007026,1.36e-10,145;UBERON:0001155,9.65e-10,9;UBERON:0004119,1.47e-09,160;UBERON:0000925,1.47e-09,160;UBERON:0006595,1.47e-09,160;UBERON:0011216,2.87e-08,223;UBERON:0000059,3.90e-08,11;UBERON:0002114,5.18e-08,2 | |||
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|short_description=p@chr11:619513..619533,- | |short_description=p@chr11:619513..619533,- | ||
}} | }} |
Latest revision as of 23:37, 23 July 2015
Short description: | p@chr11:619513..619533, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:619513..619533, - |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of prostate | 8.29e-08 | 3 |
hepatocyte | 1.47e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.34e-39 | 17 |
small intestine | 9.70e-37 | 4 |
gastrointestinal system | 1.84e-27 | 25 |
subdivision of digestive tract | 4.23e-13 | 118 |
digestive system | 1.36e-10 | 145 |
digestive tract | 1.36e-10 | 145 |
primitive gut | 1.36e-10 | 145 |
colon | 9.65e-10 | 9 |
endoderm-derived structure | 1.47e-09 | 160 |
endoderm | 1.47e-09 | 160 |
presumptive endoderm | 1.47e-09 | 160 |
organ system subdivision | 2.87e-08 | 223 |
large intestine | 3.90e-08 | 11 |
duodenum | 5.18e-08 | 2 |