FFCP PHASE1:Hg19::chr12:121813191..121813229,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:121813191..121813229,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_at_chr12:121813191..121813229,+ | |||
|id=chr12:121813191..121813229,+ | |||
|ontology_enrichment_celltype=CL:0002150!4.58e-24!3;CL:0000861!4.58e-24!3;CL:0000235!1.37e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000322;1.96e-14;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,2.09e-14,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;5.90e-17;10!UBERON:0005564;5.90e-17;10 | |||
|ontology_enrichment_disease=DOID:0050687!5.90e-08!143;DOID:3908!4.29e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:3910;6.30e-21;2!DOID:3908;3.35e-09;5!DOID:1325;6.21e-07;7!DOID:3904;6.21e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,6.96e-21,2;DOID:3908,3.49e-09,5;DOID:1325,6.39e-07,7;DOID:3904,6.39e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0001301!4.54e-09!1;UBERON:0003135!4.50e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;6.30e-21;2!UBERON:0002173;6.30e-21;2!UBERON:0002186;6.30e-21;2!UBERON:0000473;6.64e-21;8!UBERON:0003135;1.62e-15;11!UBERON:0004821;1.96e-14;3!UBERON:0007499;1.96e-14;3!UBERON:0003215;1.96e-14;3!UBERON:0010368;1.96e-14;3!UBERON:0009911;1.96e-14;3!UBERON:0002299;1.96e-14;3!UBERON:0006524;1.96e-14;3!UBERON:0008874;1.96e-14;3!UBERON:0002169;1.96e-14;3!UBERON:0004894;1.96e-14;3!UBERON:0009856;3.60e-11;4!UBERON:0000991;1.27e-08;21!UBERON:0003101;2.82e-08;22!UBERON:0000079;2.82e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.64e-21,8;UBERON:0004903,6.96e-21,2;UBERON:0002173,6.96e-21,2;UBERON:0002186,6.96e-21,2;UBERON:0003135,1.62e-15,11;UBERON:0004821,2.09e-14,3;UBERON:0003215,2.09e-14,3;UBERON:0010368,2.09e-14,3;UBERON:0009911,2.09e-14,3;UBERON:0002299,2.09e-14,3;UBERON:0006524,2.09e-14,3;UBERON:0008874,2.09e-14,3;UBERON:0002169,2.09e-14,3;UBERON:0004894,2.09e-14,3;UBERON:0000991,1.27e-08,21;UBERON:0009196,1.27e-08,21;UBERON:0009117,1.27e-08,21;UBERON:0005564,1.27e-08,21;UBERON:0004176,2.82e-08,22;UBERON:0003101,2.82e-08,22;UBERON:0000079,2.82e-08,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.07800827419625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03402920234213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55549813004637,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0.387025325156341,0.146178634172371,0.410577285266046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329663433524666,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158013611732727,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,4.84983668596732,5.35928260312357,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:121813191..121813229,+ | |||
}} |
Latest revision as of 05:55, 24 July 2015
Short description: | p@chr12:121813191..121813229, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:121813191..121813229, + |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 2.09e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 6.64e-21 | 8 |
bronchoalveolar duct junction | 6.96e-21 | 2 |
alveolar duct | 6.96e-21 | 2 |
bronchiole | 6.96e-21 | 2 |
male reproductive organ | 1.62e-15 | 11 |
pulmonary alveolus epithelium | 2.09e-14 | 3 |
alveolus | 2.09e-14 | 3 |
pulmonary lobule | 2.09e-14 | 3 |
lobule | 2.09e-14 | 3 |
alveolus of lung | 2.09e-14 | 3 |
alveolar system | 2.09e-14 | 3 |
pulmonary acinus | 2.09e-14 | 3 |
alveolar sac | 2.09e-14 | 3 |
alveolar wall | 2.09e-14 | 3 |
gonad | 1.27e-08 | 21 |
indifferent external genitalia | 1.27e-08 | 21 |
indifferent gonad | 1.27e-08 | 21 |
gonad primordium | 1.27e-08 | 21 |
external genitalia | 2.82e-08 | 22 |
male organism | 2.82e-08 | 22 |
male reproductive system | 2.82e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 6.96e-21 | 2 |
non-small cell lung carcinoma | 3.49e-09 | 5 |
bronchus cancer | 6.39e-07 | 7 |
bronchogenic carcinoma | 6.39e-07 | 7 |