FFCP PHASE1:Hg19::chr12:12869239..12869250,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:12869239..12869250,+ | |||
|description=CAGE_peak_at_chr12:12869239..12869250,+ | |description=CAGE_peak_at_chr12:12869239..12869250,+ | ||
|id=chr12:12869239..12869250,+ | |id=chr12:12869239..12869250,+ | ||
|ontology_enrichment_celltype=CL:0000181!1.98e-09!12;CL:0000417!1.98e-09!12;CL:0000668!1.98e-09!12;CL:0000414!1.98e-09!12;CL:0000412!1.98e-09!12;CL:0000182!1.98e-09!12;CL:0000815!2.86e-07!2;CL:0000792!2.86e-07!2;CL:0002677!2.86e-07!2 | |ontology_enrichment_celltype=CL:0000181!1.98e-09!12;CL:0000417!1.98e-09!12;CL:0000668!1.98e-09!12;CL:0000414!1.98e-09!12;CL:0000412!1.98e-09!12;CL:0000182!1.98e-09!12;CL:0000815!2.86e-07!2;CL:0000792!2.86e-07!2;CL:0002677!2.86e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000182;5.44e-38;12!CL:0002231;8.99e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.95e-38,12;CL:0000223,1.49e-12,58;CL:0002231,8.99e-11,3 | |||
|ontology_enrichment_development_v019=UBERON:0004161;8.34e-24;11!UBERON:0009497;2.82e-20;13!UBERON:0001041;3.27e-09;30!CL:0000223;7.31e-09;58!UBERON:0003104;9.25e-09;31 | |||
|ontology_enrichment_disease=DOID:154!4.81e-07!2;DOID:4236!4.81e-07!2 | |ontology_enrichment_disease=DOID:154!4.81e-07!2;DOID:4236!4.81e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:7;1.38e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:7,3.24e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002107!1.20e-09!19;UBERON:0006925!1.20e-09!19;UBERON:0008836!1.20e-09!19;UBERON:0003929!2.88e-09!54;UBERON:0009497!9.70e-09!25;UBERON:0000015!9.70e-09!25;UBERON:0002423!9.70e-09!25;UBERON:0006235!9.70e-09!25;UBERON:0004161!9.70e-09!25;UBERON:0008835!3.96e-08!22;UBERON:0003894!3.96e-08!22;UBERON:0009854!1.04e-07!23;UBERON:0007499!5.61e-07!25 | |ontology_enrichment_uberon=UBERON:0002107!1.20e-09!19;UBERON:0006925!1.20e-09!19;UBERON:0008836!1.20e-09!19;UBERON:0003929!2.88e-09!54;UBERON:0009497!9.70e-09!25;UBERON:0000015!9.70e-09!25;UBERON:0002423!9.70e-09!25;UBERON:0006235!9.70e-09!25;UBERON:0004161!9.70e-09!25;UBERON:0008835!3.96e-08!22;UBERON:0003894!3.96e-08!22;UBERON:0009854!1.04e-07!23;UBERON:0007499!5.61e-07!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.93e-24;19!UBERON:0006925;2.93e-24;19!UBERON:0002423;1.37e-18;25!UBERON:0002365;2.58e-14;31!UBERON:0002330;2.58e-14;31!UBERON:0002368;4.87e-13;33!UBERON:0002114;8.99e-11;2!UBERON:0000949;2.11e-10;43!UBERON:0002530;2.07e-08;57!UBERON:0002108;5.70e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.77e-24,19;UBERON:0006925,2.77e-24,19;UBERON:0008836,2.77e-24,19;UBERON:0008835,4.61e-21,22;UBERON:0003894,4.61e-21,22;UBERON:0009854,3.57e-20,23;UBERON:0007499,1.31e-18,25;UBERON:0009497,1.31e-18,25;UBERON:0000015,1.31e-18,25;UBERON:0002423,1.31e-18,25;UBERON:0006235,1.31e-18,25;UBERON:0004161,1.31e-18,25;UBERON:0009856,6.44e-18,26;UBERON:0002365,4.03e-15,31;UBERON:0002330,4.03e-15,31;UBERON:0003929,1.86e-13,54;UBERON:0002368,1.86e-13,35;UBERON:0002530,2.40e-12,59;UBERON:0002114,1.20e-10,2;UBERON:0000949,1.41e-10,45;UBERON:0005911,5.70e-09,82;UBERON:0005172,6.83e-09,54;UBERON:0005173,6.83e-09,54;UBERON:0004921,8.86e-09,118;UBERON:0002417,4.79e-08,60;UBERON:0000916,4.79e-08,60;UBERON:0001007,3.54e-07,145;UBERON:0001555,3.54e-07,145;UBERON:0007026,3.54e-07,145;UBERON:0002108,6.77e-07,4 | |||
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| ||
|short_description=p@chr12:12869239..12869250,+ | |short_description=p@chr12:12869239..12869250,+ | ||
}} | }} |
Latest revision as of 06:38, 24 July 2015
Short description: | p@chr12:12869239..12869250, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:12869239..12869250, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.95e-38 | 12 |
endodermal cell | 1.49e-12 | 58 |
epithelial cell of prostate | 8.99e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
liver | 2.77e-24 | 19 |
digestive gland | 2.77e-24 | 19 |
liver bud | 2.77e-24 | 19 |
hepatic diverticulum | 4.61e-21 | 22 |
liver primordium | 4.61e-21 | 22 |
digestive tract diverticulum | 3.57e-20 | 23 |
epithelial sac | 1.31e-18 | 25 |
epithelium of foregut-midgut junction | 1.31e-18 | 25 |
anatomical boundary | 1.31e-18 | 25 |
hepatobiliary system | 1.31e-18 | 25 |
foregut-midgut junction | 1.31e-18 | 25 |
septum transversum | 1.31e-18 | 25 |
sac | 6.44e-18 | 26 |
exocrine gland | 4.03e-15 | 31 |
exocrine system | 4.03e-15 | 31 |
gut epithelium | 1.86e-13 | 54 |
endocrine gland | 1.86e-13 | 35 |
gland | 2.40e-12 | 59 |
duodenum | 1.20e-10 | 2 |
endocrine system | 1.41e-10 | 45 |
endo-epithelium | 5.70e-09 | 82 |
abdomen element | 6.83e-09 | 54 |
abdominal segment element | 6.83e-09 | 54 |
subdivision of digestive tract | 8.86e-09 | 118 |
abdominal segment of trunk | 4.79e-08 | 60 |
abdomen | 4.79e-08 | 60 |
digestive system | 3.54e-07 | 145 |
digestive tract | 3.54e-07 | 145 |
primitive gut | 3.54e-07 | 145 |
small intestine | 6.77e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 3.24e-07 | 39 |