FFCP PHASE1:Hg19::chr12:13065994..13066009,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:13065994..13066009,+ | |||
|coexpression_cluster_id=C814 | |coexpression_cluster_id=C814 | ||
|description=CAGE_peak_at_chr12:13065994..13066009,+ | |description=CAGE_peak_at_chr12:13065994..13066009,+ | ||
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|ontology_enrichment_celltype=CL:0000066!9.08e-27!254;CL:0000077!2.04e-12!19;CL:0002681!7.23e-07!13;CL:0002584!7.23e-07!13;CL:1000497!7.91e-07!18;CL:0002518!7.91e-07!18 | |ontology_enrichment_celltype=CL:0000066!9.08e-27!254;CL:0000077!2.04e-12!19;CL:0002681!7.23e-07!13;CL:0002584!7.23e-07!13;CL:1000497!7.91e-07!18;CL:0002518!7.91e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000077;3.36e-19;19!CL:0002681;2.48e-08;12!CL:0002584;2.48e-08;12!CL:0002231;1.44e-07;3!CL:0002537;1.59e-07;5!CL:1000497;3.10e-07;17!CL:0002518;3.10e-07;17!CL:0002595;6.56e-07;5 | |ontology_enrichment_celltype_v019=CL:0000077;3.36e-19;19!CL:0002681;2.48e-08;12!CL:0002584;2.48e-08;12!CL:0002231;1.44e-07;3!CL:0002537;1.59e-07;5!CL:1000497;3.10e-07;17!CL:0002518;3.10e-07;17!CL:0002595;6.56e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.61e-19,253;CL:0000077,3.67e-19,19;CL:0002681,3.02e-08,12;CL:0002584,3.02e-08,12;CL:0002231,8.84e-08,3;CL:0002537,2.94e-07,5;CL:1000497,3.63e-07,17;CL:0002518,3.63e-07,17;CL:0002595,4.25e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.57e-07;29 | |ontology_enrichment_development_v019=UBERON:0008947;2.57e-07;29 | ||
|ontology_enrichment_disease=DOID:305!1.61e-20!106;DOID:0050687!4.40e-14!143;DOID:14566!4.05e-08!239;DOID:299!4.81e-08!25;DOID:162!2.09e-07!235 | |ontology_enrichment_disease=DOID:305!1.61e-20!106;DOID:0050687!4.40e-14!143;DOID:14566!4.05e-08!239;DOID:299!4.81e-08!25;DOID:162!2.09e-07!235 | ||
|ontology_enrichment_disease_v019=DOID:0060084;4.55e-08;3!DOID:127;4.55e-08;3!DOID:299;8.65e-07;25 | |ontology_enrichment_disease_v019=DOID:0060084;4.55e-08;3!DOID:127;4.55e-08;3!DOID:299;8.65e-07;25 | ||
|ontology_enrichment_disease_v019_2=DOID:305,2.16e-11,106;DOID:14566,2.29e-08,239;DOID:0060084,5.21e-08,3;DOID:127,5.21e-08,3;DOID:0050687,6.92e-08,143;DOID:299,5.68e-07,25;DOID:162,5.96e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0004119!7.16e-11!169;UBERON:0000925!7.16e-11!169;UBERON:0006595!7.16e-11!169;UBERON:0006554!2.24e-10!44;UBERON:0003064!2.50e-10!37;UBERON:0001008!6.61e-10!45;UBERON:0001737!8.67e-09!9;UBERON:0001007!1.05e-08!155;UBERON:0001555!1.05e-08!155;UBERON:0007026!1.05e-08!155;UBERON:0005911!2.93e-08!82;UBERON:0003104!8.18e-08!238;UBERON:0009142!8.18e-08!238;UBERON:0002367!1.55e-07!11;UBERON:0010147!1.55e-07!11;UBERON:0009846!1.55e-07!11;UBERON:0003353!1.55e-07!11;UBERON:0004902!1.55e-07!11;UBERON:0003820!1.55e-07!11;UBERON:0009847!1.55e-07!11;UBERON:0000065!4.01e-07!53;UBERON:0000162!4.17e-07!14;UBERON:0001353!4.17e-07!14;UBERON:0000163!4.17e-07!14;UBERON:0006866!4.17e-07!14;UBERON:0000164!4.17e-07!14;UBERON:0000931!4.17e-07!14;UBERON:0001851!4.87e-07!16;UBERON:0004921!5.39e-07!129;UBERON:0004185!5.39e-07!129;UBERON:0008947!7.12e-07!38;UBERON:0003258!7.12e-07!38;UBERON:0001225!7.23e-07!13;UBERON:0008987!7.23e-07!13;UBERON:0005153!7.94e-07!37;UBERON:0000077!9.58e-07!130 | |ontology_enrichment_uberon=UBERON:0004119!7.16e-11!169;UBERON:0000925!7.16e-11!169;UBERON:0006595!7.16e-11!169;UBERON:0006554!2.24e-10!44;UBERON:0003064!2.50e-10!37;UBERON:0001008!6.61e-10!45;UBERON:0001737!8.67e-09!9;UBERON:0001007!1.05e-08!155;UBERON:0001555!1.05e-08!155;UBERON:0007026!1.05e-08!155;UBERON:0005911!2.93e-08!82;UBERON:0003104!8.18e-08!238;UBERON:0009142!8.18e-08!238;UBERON:0002367!1.55e-07!11;UBERON:0010147!1.55e-07!11;UBERON:0009846!1.55e-07!11;UBERON:0003353!1.55e-07!11;UBERON:0004902!1.55e-07!11;UBERON:0003820!1.55e-07!11;UBERON:0009847!1.55e-07!11;UBERON:0000065!4.01e-07!53;UBERON:0000162!4.17e-07!14;UBERON:0001353!4.17e-07!14;UBERON:0000163!4.17e-07!14;UBERON:0006866!4.17e-07!14;UBERON:0000164!4.17e-07!14;UBERON:0000931!4.17e-07!14;UBERON:0001851!4.87e-07!16;UBERON:0004921!5.39e-07!129;UBERON:0004185!5.39e-07!129;UBERON:0008947!7.12e-07!38;UBERON:0003258!7.12e-07!38;UBERON:0001225!7.23e-07!13;UBERON:0008987!7.23e-07!13;UBERON:0005153!7.94e-07!37;UBERON:0000077!9.58e-07!130 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.30e-15;9!UBERON:0001557;2.30e-15;9!UBERON:0002367;5.02e-12;11!UBERON:0010147;5.02e-12;11!UBERON:0003937;6.80e-11;12!UBERON:0005399;6.80e-11;12!UBERON:0001225;2.48e-08;12!UBERON:0008987;2.48e-08;12!UBERON:0005631;1.63e-07;10!UBERON:0000158;1.63e-07;10!UBERON:0003834;6.56e-07;5!UBERON:0001533;6.56e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0001737;2.30e-15;9!UBERON:0001557;2.30e-15;9!UBERON:0002367;5.02e-12;11!UBERON:0010147;5.02e-12;11!UBERON:0003937;6.80e-11;12!UBERON:0005399;6.80e-11;12!UBERON:0001225;2.48e-08;12!UBERON:0008987;2.48e-08;12!UBERON:0005631;1.63e-07;10!UBERON:0000158;1.63e-07;10!UBERON:0003834;6.56e-07;5!UBERON:0001533;6.56e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.39e-15,9;UBERON:0006554,1.48e-13,47;UBERON:0001008,3.66e-13,48;UBERON:0002367,4.49e-12,11;UBERON:0010147,4.49e-12,11;UBERON:0009846,4.49e-12,11;UBERON:0003353,4.49e-12,11;UBERON:0004902,4.49e-12,11;UBERON:0003820,4.49e-12,11;UBERON:0009847,4.49e-12,11;UBERON:0003937,6.15e-11,12;UBERON:0005399,6.15e-11,12;UBERON:0000162,3.73e-09,14;UBERON:0001353,3.73e-09,14;UBERON:0000163,3.73e-09,14;UBERON:0006866,3.73e-09,14;UBERON:0000164,3.73e-09,14;UBERON:0000931,3.73e-09,14;UBERON:0004122,1.92e-08,15;UBERON:0001557,2.32e-08,19;UBERON:0001225,3.02e-08,12;UBERON:0008987,3.02e-08,12;UBERON:0003064,2.49e-07,28;UBERON:0003834,4.25e-07,5;UBERON:0001533,4.25e-07,5;UBERON:0004119,8.16e-07,160;UBERON:0000925,8.16e-07,160;UBERON:0006595,8.16e-07,160 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,4.42321085702716,9.76921635161399,0,0.263766978228454,0.37129905888014,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0.188242339542605,0.545812300115692,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.722878304769133,0,1.30361867064741,0,0.486634870302636,0.189069634328136,0.221729397462564,0.614843499851882,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0.550236083880135,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0,0.17859945656816,0,0.112611480483322,0,0,0,0,0,0.436094052142534,0,0.12663051166458,0.264818361626438,0,1.41867352879343,0.560677600142307,0,0.74000264525148,0,0,0,0.605429710579726,0,0,0,0,0,0,0,0,0.204154171254893,0.122834317311768,0.206651562351531,0,0,0,0.718618141816238,0,0,0,0,0.30648779579902,0,0.113432183160021,1.4351170855109,0.213557388818567,0,1.50045548042201,0.103052529238439,1.03056216018252,0.18611685633159,0.168776332241266,0,0,0.184099797284599,0.161646056818812,0.710019185033229,0.201504196455281,0,0.193260853163297,0,0.286804595389004,0,0,0,0.10366105501537,0,0,0,0,0,0,0,2.72105640091641,2.36018566109342,2.41011029883482,3.639701100169,3.7039505495709,2.13543557199987,1.8876383142423,0.98110732562673,2.69323009862473,0,0,0,0,0,0,0,0,1.59884970106048,1.54411029268673,0,0,0,0,0,0,5.77325368101093,0.115930404975077,0.117408694235822,0.144366447761074,0,0,1.58040879591855,1.71697232418975,0,0,0,0,0.16798212819886,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0.308482478109971,0,0,0.224262168690721,1.74384027533312,0.5867062865676,0.129271715757778,0,0,3.19125739901845,2.08014873822732,0,0,0,0.285955987316295,0.542621605391443,0,0,0.355391948742546,0,1.20575750823834,0.871533458600294,5.69846049737725,0,0,0,0.239624855491583,0,0,0.144781306667579,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0.500170521059677,0.271265023699736,0,0.892144943985809,0.473107245101804,0.117141414992713,0.300946099727719,0,0,0,0,0.0868836144680828,0.195801157462741,0,0,0,0,0,1.66435439510497,0,0,0,0,0.256278298511402,0.511707249066704,0,0,0,0,0,0,0,1.81289174387433,5.61418116849198,2.5782676902051,2.18147451512753,0.910455840033585,2.09799063935079,2.25599806453706,1.5403067420883,0,0,0.527758144464379,1.13733384070897,0.510281115829547,0.431831832204279,0,1.35473218771926,0.501689773854853,2.80363900349542,4.98645605357235,0.895499018888713,0,0,0.256450125116389,2.95213181129735,0.325378394664303,0.309123034943167,0.0915694648183434,0,0,0,0,0,0,0,0.137836572484531,0,0.145016693914229,0.170453254832202,0,0.826424576804891,0.384380134730212,0,0.30347334256665,0,1.5740617341532,0,0,0.532306030317022,0,0.18532421910392,0.286249773483982,0.372158369359667,0.632758849437452,0.762520775695299,0.255897791311334,0,0,0,0,0,0.589062011728432,0.202182481573316,0,0.421258456238981,0,1.46228093778771,2.11300293513511,1.36499911407986,2.54529777516683,0,0.551365343546124,1.99031692572366,1.75380354101505,0,0,0,0,0,0,0.196498082026242,0,0.354761064070598,0.422215270595328,0.329294892959902,0,0,0,0,0,0.188287601553558,1.29151611801369,1.68471475667626,1.7737206141467,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0,0,0,0.71623345421307,1.18785872333055,2.15012491469462,0,0,0,0,0,0.996239941255349,0,0,0.102268682502155,0,0.311039587661807,1.43789361835723,0.895105873378046,0,0.394573622547734,0,0,0,0,0,0,0,0,1.70690172428249,0.508507300585533,0,0,0,0.173624994933292,0,0,0,0,0,0,0.21787692703798,0.557694977114413,0,0,0,0.179515288819544,0.434589487688032,1.27600463892768,0.732780747214898,2.13213910407454,0,0,0,0,0,0,0,0,0.843992258112108,1.95879369790977,0.282706142867882,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0.19566461893209,1.21390189767046,0,1.20990716048664,0.30607276163049,0,0,0,0,0.330991955875499,0,0,0.284609546029793,0,3.29763502836749,0.195984794828755,0.522355239482415,0,0,1.54810130062536,0.511625219603299,1.14961639874493,0,0,0.225980740780532,0.274083849293502,0.19871461170299,0,1.56441106187842,0.160317640503067,0.426905989478705,0.19980960958213,0.432271251462318,0,0,0.720273989940749,0,0.235694034616795,0,0,0.203996435272644,0,0,0,0,0,0,0,0,0,0.998395002494955,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0.0524545881349981,0.105600336519406,0.717149357331379,0.767660789277781,0,0,0,5.42999601753713,3.45688596480507,2.28611152076586,0,0,0,0.339936274560377,0,0,0,0,0.171086837884329,0,0.961086713109252,1.10043013569766,3.72815149812476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,3.52898729547258,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0.521745061811734,0.300515217994437,3.80805212168795,0,0,0.322231671127465,0,1.9904794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| ||
|short_description=p@chr12:13065994..13066009,+ | |short_description=p@chr12:13065994..13066009,+ | ||
}} | }} |
Latest revision as of 06:44, 24 July 2015
Short description: | p@chr12:13065994..13066009, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:13065994..13066009, + |
Coexpression cluster: | C814_Alveolar_mesothelioma_bile_Renal_papillotubular_papillary_serous |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.61e-19 | 253 |
mesothelial cell | 3.67e-19 | 19 |
kidney cortical cell | 3.02e-08 | 12 |
renal cortical epithelial cell | 3.02e-08 | 12 |
epithelial cell of prostate | 8.84e-08 | 3 |
amnion mesenchymal stem cell | 2.94e-07 | 5 |
kidney cell | 3.63e-07 | 17 |
kidney epithelial cell | 3.63e-07 | 17 |
smooth muscle cell of the subclavian artery | 4.25e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.39e-15 | 9 |
urinary system structure | 1.48e-13 | 47 |
renal system | 3.66e-13 | 48 |
prostate gland | 4.49e-12 | 11 |
male accessory sex gland | 4.49e-12 | 11 |
embryonic cloacal epithelium | 4.49e-12 | 11 |
epithelium of hindgut | 4.49e-12 | 11 |
urogenital sinus epithelium | 4.49e-12 | 11 |
prostate bud | 4.49e-12 | 11 |
prostate field | 4.49e-12 | 11 |
sex gland | 6.15e-11 | 12 |
male reproductive gland | 6.15e-11 | 12 |
cloaca | 3.73e-09 | 14 |
anal region | 3.73e-09 | 14 |
embryonic cloaca | 3.73e-09 | 14 |
terminal part of digestive tract | 3.73e-09 | 14 |
primitive urogenital sinus | 3.73e-09 | 14 |
proctodeum | 3.73e-09 | 14 |
genitourinary system | 1.92e-08 | 15 |
upper respiratory tract | 2.32e-08 | 19 |
cortex of kidney | 3.02e-08 | 12 |
renal parenchyma | 3.02e-08 | 12 |
intermediate mesoderm | 2.49e-07 | 28 |
thoracic segment blood vessel | 4.25e-07 | 5 |
subclavian artery | 4.25e-07 | 5 |
endoderm-derived structure | 8.16e-07 | 160 |
endoderm | 8.16e-07 | 160 |
presumptive endoderm | 8.16e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.16e-11 | 106 |
disease of cellular proliferation | 2.29e-08 | 239 |
cell type benign neoplasm | 5.21e-08 | 3 |
leiomyoma | 5.21e-08 | 3 |
cell type cancer | 6.92e-08 | 143 |
adenocarcinoma | 5.68e-07 | 25 |
cancer | 5.96e-07 | 235 |