FFCP PHASE1:Hg19::chr12:13067971..13067974,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-151bp_to_uc001rbb.3_5end | |association_with_transcript=-151bp_to_uc001rbb.3_5end | ||
|cluster_id=chr12:13067971..13067974,+ | |||
|description=CAGE_peak_1_at_uc001rbb.3_5end | |description=CAGE_peak_1_at_uc001rbb.3_5end | ||
|id=chr12:13067971..13067974,+ | |id=chr12:13067971..13067974,+ | ||
|ontology_enrichment_celltype=CL:0000077;3.17e-12;19 | |ontology_enrichment_celltype=CL:0000066!3.26e-24!254;CL:0000077!1.02e-08!19;CL:0000076!2.42e-08!62 | ||
| | |ontology_enrichment_celltype_v019=CL:0000077;3.17e-12;19 | ||
|ontology_enrichment_disease=DOID:4929;1.08e-08;2 | |ontology_enrichment_celltype_v019_2=CL:0000077,3.89e-12,19;CL:0000066,4.48e-11,253;CL:0000076,1.40e-07,63 | ||
|ontology_enrichment_uberon=UBERON:0002394;4.41e-09;4!UBERON:0003928;4.41e-09;4 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:305!8.93e-25!106;DOID:0050687!2.38e-21!143;DOID:162!3.14e-12!235;DOID:14566!8.88e-12!239;DOID:1749!1.15e-10!14;DOID:299!3.08e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:4929;1.08e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.71e-10,106;DOID:0050687,2.73e-10,143;DOID:4929,1.13e-08,2;DOID:162,2.64e-07,235;DOID:14566,5.12e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.69e-15!169;UBERON:0000925!3.69e-15!169;UBERON:0006595!3.69e-15!169;UBERON:0001007!1.23e-13!155;UBERON:0001555!1.23e-13!155;UBERON:0007026!1.23e-13!155;UBERON:0004921!2.84e-12!129;UBERON:0004185!2.84e-12!129;UBERON:0000077!9.68e-10!130;UBERON:0005911!1.00e-08!82;UBERON:0000065!2.96e-08!53;UBERON:0008947!3.47e-08!38;UBERON:0003258!3.47e-08!38;UBERON:0005153!6.85e-08!37;UBERON:0005157!1.36e-07!51;UBERON:0001041!9.61e-07!98 | |||
|ontology_enrichment_uberon_v019=UBERON:0002394;4.41e-09;4!UBERON:0003928;4.41e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,4.99e-07,118;UBERON:0005911,6.54e-07,82 | |||
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| ||
|short_description=p1@uc001rbb.3 | |short_description=p1@uc001rbb.3 | ||
}} | }} |
Latest revision as of 06:44, 24 July 2015
Short description: | p1@uc001rbb.3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_uc001rbb.3_5end |
Coexpression cluster: | NA |
Association with transcript: | -151bp_to_uc001rbb.3_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 3.89e-12 | 19 |
epithelial cell | 4.48e-11 | 253 |
squamous epithelial cell | 1.40e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
subdivision of digestive tract | 4.99e-07 | 118 |
endo-epithelium | 6.54e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.71e-10 | 106 |
cell type cancer | 2.73e-10 | 143 |
tubular adenocarcinoma | 1.13e-08 | 2 |
cancer | 2.64e-07 | 235 |
disease of cellular proliferation | 5.12e-07 | 239 |