FFCP PHASE1:Hg19::chr12:133039984..133039997,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:133039984..133039997,+ | |||
|coexpression_cluster_id=C53 | |coexpression_cluster_id=C53 | ||
|description=CAGE_peak_at_chr12:133039984..133039997,+ | |description=CAGE_peak_at_chr12:133039984..133039997,+ | ||
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|ontology_enrichment_celltype=CL:0000243!7.67e-08!15;CL:0000125!7.67e-08!15;CL:0000030!7.67e-08!15;CL:0000339!7.67e-08!15;CL:0000095!5.01e-07!17;CL:0000123!5.01e-07!17 | |ontology_enrichment_celltype=CL:0000243!7.67e-08!15;CL:0000125!7.67e-08!15;CL:0000030!7.67e-08!15;CL:0000339!7.67e-08!15;CL:0000095!5.01e-07!17;CL:0000123!5.01e-07!17 | ||
|ontology_enrichment_celltype_v019=CL:0000243;1.17e-07;15!CL:0000125;1.17e-07;15!CL:0000095;6.01e-07;17 | |ontology_enrichment_celltype_v019=CL:0000243;1.17e-07;15!CL:0000125;1.17e-07;15!CL:0000095;6.01e-07;17 | ||
|ontology_enrichment_celltype_v019_2=CL:0000243,1.17e-07,15;CL:0000125,1.17e-07,15;CL:0000030,1.17e-07,15;CL:0000339,1.17e-07,15;CL:0000095,6.01e-07,17;CL:0000123,6.01e-07,17 | |||
|ontology_enrichment_development_v019=UBERON:0003056;3.86e-38;3!UBERON:0006238;2.55e-11;10!CL:0000339;1.17e-07;15 | |ontology_enrichment_development_v019=UBERON:0003056;3.86e-38;3!UBERON:0006238;2.55e-11;10!CL:0000339;1.17e-07;15 | ||
|ontology_enrichment_disease=DOID:3093!4.71e-11!11 | |ontology_enrichment_disease=DOID:3093!4.71e-11!11 | ||
|ontology_enrichment_disease_v019=DOID:3093;1.85e-10;11!DOID:5409;1.82e-08;4 | |ontology_enrichment_disease_v019=DOID:3093;1.85e-10;11!DOID:5409;1.82e-08;4 | ||
|ontology_enrichment_disease_v019_2=DOID:3093,1.85e-10,11;DOID:5409,1.82e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0000966!1.55e-07!5;UBERON:0005388!1.55e-07!5;UBERON:0001802!1.55e-07!5;UBERON:0000970!9.56e-07!20 | |ontology_enrichment_uberon=UBERON:0000966!1.55e-07!5;UBERON:0005388!1.55e-07!5;UBERON:0001802!1.55e-07!5;UBERON:0000970!9.56e-07!20 | ||
|ontology_enrichment_uberon_v019=UBERON:0000966;2.27e-23;5!UBERON:0005388;2.27e-23;5!UBERON:0001802;2.27e-23;5!UBERON:0001905;1.54e-15;2!UBERON:0002757;1.54e-15;2!UBERON:0010134;1.54e-15;2!UBERON:0005408;1.54e-15;2!UBERON:0001899;1.54e-15;2!UBERON:0000970;2.19e-13;20!UBERON:0002104;8.73e-13;21!UBERON:0000020;9.74e-12;23!UBERON:0001032;2.80e-11;24!UBERON:0004456;2.80e-11;24!UBERON:0003296;1.96e-08;4!UBERON:0010133;1.96e-08;4!UBERON:0002784;1.96e-08;4!UBERON:0000019;6.97e-07;19!UBERON:0000047;6.97e-07;19!UBERON:0004088;6.97e-07;19!UBERON:0010230;6.97e-07;19 | |ontology_enrichment_uberon_v019=UBERON:0000966;2.27e-23;5!UBERON:0005388;2.27e-23;5!UBERON:0001802;2.27e-23;5!UBERON:0001905;1.54e-15;2!UBERON:0002757;1.54e-15;2!UBERON:0010134;1.54e-15;2!UBERON:0005408;1.54e-15;2!UBERON:0001899;1.54e-15;2!UBERON:0000970;2.19e-13;20!UBERON:0002104;8.73e-13;21!UBERON:0000020;9.74e-12;23!UBERON:0001032;2.80e-11;24!UBERON:0004456;2.80e-11;24!UBERON:0003296;1.96e-08;4!UBERON:0010133;1.96e-08;4!UBERON:0002784;1.96e-08;4!UBERON:0000019;6.97e-07;19!UBERON:0000047;6.97e-07;19!UBERON:0004088;6.97e-07;19!UBERON:0010230;6.97e-07;19 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000966,1.26e-19,6;UBERON:0005388,1.26e-19,6;UBERON:0001802,1.26e-19,6;UBERON:0001905,1.54e-15,2;UBERON:0002757,1.54e-15,2;UBERON:0010134,1.54e-15,2;UBERON:0005408,1.54e-15,2;UBERON:0001899,1.54e-15,2;UBERON:0000970,9.09e-13,21;UBERON:0002104,9.09e-13,21;UBERON:0000020,2.90e-11,24;UBERON:0001032,2.90e-11,24;UBERON:0004456,2.90e-11,24;UBERON:0003296,1.96e-08,4;UBERON:0010133,1.96e-08,4;UBERON:0002784,1.96e-08,4 | |||
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|short_description=p@chr12:133039984..133039997,+ | |short_description=p@chr12:133039984..133039997,+ | ||
}} | }} |
Latest revision as of 06:52, 24 July 2015
Short description: | p@chr12:133039984..133039997, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:133039984..133039997, + |
Coexpression cluster: | C53_medulloblastoma_pineal_retinoblastoma_small_retina_eye_pituitary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glial cell (sensu Vertebrata) | 1.17e-07 | 15 |
glial cell | 1.17e-07 | 15 |
glioblast | 1.17e-07 | 15 |
glioblast (sensu Vertebrata) | 1.17e-07 | 15 |
neuron associated cell | 6.01e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 6.01e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
retina | 1.26e-19 | 6 |
photoreceptor array | 1.26e-19 | 6 |
posterior segment of eyeball | 1.26e-19 | 6 |
pineal body | 1.54e-15 | 2 |
regional part of epithalamus | 1.54e-15 | 2 |
secretory circumventricular organ | 1.54e-15 | 2 |
circumventricular organ | 1.54e-15 | 2 |
epithalamus | 1.54e-15 | 2 |
eye | 9.09e-13 | 21 |
visual system | 9.09e-13 | 21 |
sense organ | 2.90e-11 | 24 |
sensory system | 2.90e-11 | 24 |
entire sense organ system | 2.90e-11 | 24 |
gland of diencephalon | 1.96e-08 | 4 |
neuroendocrine gland | 1.96e-08 | 4 |
regional part of diencephalon | 1.96e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 1.85e-10 | 11 |
lung small cell carcinoma | 1.82e-08 | 4 |