FFCP PHASE1:Hg19::chr12:15941738..15941768,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:15941738..15941768,+ | |||
|description=CAGE_peak_at_chr12:15941738..15941768,+ | |||
|id=chr12:15941738..15941768,+ | |||
|ontology_enrichment_celltype=CL:0000128!9.98e-07!7;CL:0000126!9.98e-07!7;CL:0000127!9.98e-07!7;CL:0002453!9.98e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0002549;3.58e-57;2!CL:0002575;6.36e-57;2!CL:0000669;4.21e-29;4!CL:0002521;8.99e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002549,4.77e-57,2;CL:0002575,6.36e-57,2;CL:0000669,4.21e-29,4;CL:0002521,8.99e-11,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3493;1.33e-15;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.33e-15,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0005629;3.58e-57;2!UBERON:0005358;3.58e-57;2!UBERON:0001886;3.58e-57;2!UBERON:0004086;3.58e-57;2!UBERON:0005282;3.58e-57;2!UBERON:0005281;3.58e-57;2!UBERON:0005284;1.28e-23;5!UBERON:0006876;2.55e-11;11!UBERON:0002190;8.99e-11;3!UBERON:0002072;5.70e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005629,4.77e-57,2;UBERON:0005358,4.77e-57,2;UBERON:0001886,4.77e-57,2;UBERON:0004086,4.77e-57,2;UBERON:0005282,4.77e-57,2;UBERON:0005281,4.77e-57,2;UBERON:0005284,1.44e-23,5;UBERON:0006876,2.68e-11,11;UBERON:0002190,8.99e-11,3;UBERON:0002072,5.70e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,2.53299878168311,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.408001382488506,0,0,0.136874425072884,0.251085279189606,0,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0.311211035399766,0,0,5.75158225050739,1.15235184896,0,0,0.570471821544449,0,0,0.323745888736263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381988425558278,0,0,0,0,0,0.336393253036082,0,0.4400297149257,0.129271715757778,0,0,0,0,0.257207374262142,1.41849132023278,0,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.13281851940385,1.37257369524342,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0.15350367472613,0,0.107420244868274,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20453736500431,0.246169610922139,0,0.269605053441981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0.0897576444097721,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0.296521128680622,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0.150323419414493,0,0.664653872707185,0,0,0,0,0,0,0.0979923974143777,0.0870592065804026,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288180834308212,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236349546921671,0.0824158583811665,0.13480708770837,0,0,0,0,0.321506296930038,0.687697182986169,0.415440338029185,0.2249738915515,0,0,0,0.157611414598396,0.0524545881349981,0.316801009558219,0,0.191915197319445,0,0,0,0.542999601753713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0.121792598380896,0,0,0.5013797880454,0.612691153526923,0.327872630709804,0,0,0,0,0,0,0.0620964029413835,0.138348634936231,0,0,0.285465333544967,0,0,0,0.298509605773748,0.233713309847224,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0.231051332300676,0,0,0,0.0752103283492573,0,0.781514011233092,0.523813388962845,0,0.147856086217045,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0.142953088353313,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0.098150233615243,4.87671699929078,0,0,0,0,0,0.198950775161368,0,0.33883824611688,0,0,0,0,0,0,0.235676547101626,0,0,0,0,0,0.0644578879735772,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0.534434810531121,0.36757959813938,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342233301085281,0,0,0,0.0814032686109745,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:15941738..15941768,+ | |||
}} |
Latest revision as of 07:11, 24 July 2015
Short description: | p@chr12:15941738..15941768, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:15941738..15941768, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of choroid plexus | 4.77e-57 | 2 |
central nervous system pericyte | 6.36e-57 | 2 |
pericyte cell | 4.21e-29 | 4 |
subcutaneous fat cell | 8.99e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
vascular plexus | 4.77e-57 | 2 |
ventricle of nervous system | 4.77e-57 | 2 |
choroid plexus | 4.77e-57 | 2 |
brain ventricle | 4.77e-57 | 2 |
ventricular system of brain | 4.77e-57 | 2 |
ventricular system of central nervous system | 4.77e-57 | 2 |
brain vasculature | 1.44e-23 | 5 |
vasculature of organ | 2.68e-11 | 11 |
subcutaneous adipose tissue | 8.99e-11 | 3 |
hypodermis | 5.70e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.33e-15 | 2 |