FFCP PHASE1:Hg19::chr12:18395939..18395960,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:18395939..18395960,+ | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_at_chr12:18395939..18395960,+ | |description=CAGE_peak_at_chr12:18395939..18395960,+ | ||
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|ontology_enrichment_celltype=CL:0000181!3.56e-12!12;CL:0000417!3.56e-12!12;CL:0000668!3.56e-12!12;CL:0000414!3.56e-12!12;CL:0000412!3.56e-12!12;CL:0000182!3.56e-12!12 | |ontology_enrichment_celltype=CL:0000181!3.56e-12!12;CL:0000417!3.56e-12!12;CL:0000668!3.56e-12!12;CL:0000414!3.56e-12!12;CL:0000412!3.56e-12!12;CL:0000182!3.56e-12!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.92e-22;12 | |ontology_enrichment_celltype_v019=CL:0000182;1.92e-22;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.82e-22,12 | |||
|ontology_enrichment_development_v019=UBERON:0006242;1.44e-17;1!UBERON:0004161;4.32e-14;11!UBERON:0009497;5.06e-12;13 | |ontology_enrichment_development_v019=UBERON:0006242;1.44e-17;1!UBERON:0004161;4.32e-14;11!UBERON:0009497;5.06e-12;13 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3493;1.38e-09;2 | |ontology_enrichment_disease_v019=DOID:3493;1.38e-09;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3493,1.33e-09,2 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002423;1.27e-23;25!UBERON:0002107;6.63e-22;19!UBERON:0006925;6.63e-22;19!UBERON:0002108;3.37e-14;4!UBERON:0002365;6.42e-14;31!UBERON:0002330;6.42e-14;31!UBERON:0002368;3.43e-11;33!UBERON:0000160;6.96e-09;17!UBERON:0005172;2.20e-08;52!UBERON:0005173;2.20e-08;52!UBERON:0001007;1.07e-07;81!UBERON:0000949;3.01e-07;43!UBERON:0005409;4.54e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0002423;1.27e-23;25!UBERON:0002107;6.63e-22;19!UBERON:0006925;6.63e-22;19!UBERON:0002108;3.37e-14;4!UBERON:0002365;6.42e-14;31!UBERON:0002330;6.42e-14;31!UBERON:0002368;3.43e-11;33!UBERON:0000160;6.96e-09;17!UBERON:0005172;2.20e-08;52!UBERON:0005173;2.20e-08;52!UBERON:0001007;1.07e-07;81!UBERON:0000949;3.01e-07;43!UBERON:0005409;4.54e-07;22 | ||
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|short_description=p@chr12:18395939..18395960,+ | |short_description=p@chr12:18395939..18395960,+ | ||
}} | }} |
Latest revision as of 07:20, 24 July 2015
Short description: | p@chr12:18395939..18395960, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:18395939..18395960, + |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.82e-22 | 12 |
Ontology term | p-value | n |
---|---|---|
epithelium of foregut-midgut junction | 1.20e-23 | 25 |
anatomical boundary | 1.20e-23 | 25 |
hepatobiliary system | 1.20e-23 | 25 |
foregut-midgut junction | 1.20e-23 | 25 |
septum transversum | 1.20e-23 | 25 |
liver | 6.21e-22 | 19 |
digestive gland | 6.21e-22 | 19 |
liver bud | 6.21e-22 | 19 |
hepatic diverticulum | 5.79e-19 | 22 |
liver primordium | 5.79e-19 | 22 |
digestive tract diverticulum | 3.81e-18 | 23 |
epithelial sac | 1.05e-16 | 25 |
sac | 4.57e-16 | 26 |
small intestine | 3.60e-14 | 4 |
exocrine gland | 1.72e-13 | 31 |
exocrine system | 1.72e-13 | 31 |
endocrine gland | 5.90e-12 | 35 |
gut epithelium | 7.08e-11 | 54 |
abdomen element | 7.08e-11 | 54 |
abdominal segment element | 7.08e-11 | 54 |
abdominal segment of trunk | 9.09e-10 | 60 |
abdomen | 9.09e-10 | 60 |
endocrine system | 2.64e-09 | 45 |
intestine | 7.25e-09 | 17 |
digestive system | 1.82e-08 | 145 |
digestive tract | 1.82e-08 | 145 |
primitive gut | 1.82e-08 | 145 |
subdivision of digestive tract | 2.39e-08 | 118 |
endoderm-derived structure | 1.33e-07 | 160 |
endoderm | 1.33e-07 | 160 |
presumptive endoderm | 1.33e-07 | 160 |
gland | 4.31e-07 | 59 |
endo-epithelium | 4.43e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.33e-09 | 2 |