FFCP PHASE1:Hg19::chr12:20523363..20523367,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:20523363..20523367,+ | |||
|description=CAGE_peak_at_chr12:20523363..20523367,+ | |||
|id=chr12:20523363..20523367,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000097;9.01e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,9.41e-09,5;CL:0002028,9.41e-09,5 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.06e-08;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.90e-20!115;UBERON:0000468!6.52e-15!659;UBERON:0000477!9.40e-14!286;UBERON:0000922!4.10e-12!612;UBERON:0000025!1.43e-11!194;UBERON:0000467!1.63e-11!625;UBERON:0000480!2.30e-11!626;UBERON:0002050!5.32e-11!605;UBERON:0005423!5.32e-11!605;UBERON:0000481!5.81e-11!347;UBERON:0000923!1.13e-10!604;UBERON:0005291!1.13e-10!604;UBERON:0006598!1.13e-10!604;UBERON:0002532!1.13e-10!604;UBERON:0004111!7.41e-10!241;UBERON:0002616!1.11e-09!59;UBERON:0000119!1.40e-08!312;UBERON:0000063!1.98e-08!97;UBERON:0000483!2.12e-08!309;UBERON:0000064!3.05e-08!219;UBERON:0000062!3.87e-08!511;UBERON:0001737!6.47e-08!9;UBERON:0001049!8.40e-08!57;UBERON:0005068!8.40e-08!57;UBERON:0006241!8.40e-08!57;UBERON:0007135!8.40e-08!57;UBERON:0007100!2.35e-07!27;UBERON:0000955!4.13e-07!69;UBERON:0006238!4.13e-07!69;UBERON:0001017!4.31e-07!82;UBERON:0000073!4.83e-07!94;UBERON:0001016!4.83e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;6.46e-13;9!UBERON:0001557;6.46e-13;9!UBERON:0007100;5.89e-09;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,3.54e-13,9;UBERON:0007100,3.05e-09,27;UBERON:0004921,1.15e-08,118;UBERON:0007023,6.13e-08,114;UBERON:0001048,1.43e-07,160;UBERON:0001557,2.61e-07,19;UBERON:0001041,5.62e-07,87;UBERON:0002050,7.22e-07,564;UBERON:0000923,9.80e-07,560;UBERON:0010316,9.80e-07,560;UBERON:0005291,9.80e-07,560;UBERON:0006598,9.80e-07,560;UBERON:0010317,9.80e-07,560;UBERON:0002532,9.80e-07,560 | |||
|phase1_expression=0.908391896352783,0.214100523890983,1.55049844505568,1.0007329835313,1.78784437770915,0,0,0,0,1.22866968250754,0,2.62129646556207,1.05506791291381,0.247532705920093,0,0,0,0,0,0.369363174230364,0.408001382488506,0.940364164434263,0.572471974262113,0.684372125364421,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0.200544447470142,0,0.447830948479849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,1.21079900526674,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0.144824403882799,2.43806866313962,0.670700859703636,0.12786256184353,0.361439152384566,1.00267582127178,0.434539556882471,0.795285947051099,0.486634870302636,0.661743720148475,1.10864698731282,0.790513071238134,0.72038491523742,0,0,0,0,0,0,0,0,1.19257444420023,0,1.38856200643038,1.13061588384802,0.419499436209906,1.6507082516404,0.208994966536811,0,0,0.66944122552934,0,0,0,0.367663080345869,2.43042584364528,1.69669483739752,0.673588117878509,0.900891843866578,1.53316637465883,0.949265659568129,2.01521918323448,0,0,0,1.49091585508596,1.13967460498122,0.132409180813219,2.29469296599051,0,0.560677600142307,0,0,0.933633106199299,2.55950276932407,3.26923806226917,0.605429710579726,0.576175924479999,0,0,0.570471821544449,0,0,0.161872944368132,0,0,0,0,0,0.741800787835671,0,0,0,0.250237039743928,0,0,0,0.45071417671979,0.113432183160021,0.89694817844431,0.640672166455702,0,0,0,2.06112432036503,0.558350568994769,0,0,0,0,1.45481451136931,0,0,0,0,0,0,0,0.265059536642971,0.116193942869518,0.10366105501537,0.504641701751257,1.09493207722749,0,0,0,0.464367928031979,0,3.66751080123516,3.70886318171824,1.68707720918437,4.63234685476055,4.79334777003293,2.60997681022206,4.85392709376592,4.70931516300831,4.23221872641029,0,0,1.6462960453256,1.47008711385542,0,0,1.18157981336281,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0.144366447761074,0.462985512576611,1.52203321787679,0,0,0,0,0,0,0,0,0,0,0,3.4486426652716,10.125569911521,9.12243708379397,6.19715799692934,5.17593977048158,0,0,0,0,0,0,0,1.34557301214433,0,0.22001485746285,0,0,0,0.26593811658487,1.04007436911366,0,0,0.799266537048298,3.0025378668211,0,0,0.325736184293735,2.48774364119782,0,0,0,0,0,0,0,0.239624855491583,2.29723871668228,0,0.579125226670317,0.410952645100767,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0.24538298343828,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0.0868836144680828,0.195801157462741,0.343143423810856,0,0,0,0.303127571446259,0,0.30239029332968,0.744323423456331,0.920771839728375,0,0.640695746278505,0.511707249066704,0.160853921143607,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0.231046011313244,0.784349769176855,0,0,0,0.850468526382578,0.215915916102139,0,1.35473218771926,1.00337954770971,0,0.831076008928724,0.223874754722178,0.438519753291869,0,0,0,0,0.515205058238611,0.0915694648183434,0,0,0,0,0.096670718292122,1.3864375540318,1.07452572308291,0.964856007391714,2.14840489736547,1.30515024522806,0.767039646744908,0.178064071293475,0,0,0,0,0,0,0,0.924100740528266,0,0,0,3.2918723950658,0.372158369359667,2.21465597303108,0.953150969619124,0,0,0,0.78494864019923,0.899362287916574,2.74537029736055,0.824686816419805,0,0,0,0.48763373908959,1.21856744815642,2.11300293513511,0.136499911407986,0.282810863907425,1.13008116620243,0,0.66343897524122,0.438450885253763,0.578775534266688,0.655894752046633,0,0,0.563391205064483,0,0,0,0,0,0,0,0,0,0,0,1.22386941009813,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,4.32729085561573,0.33307196799782,0,0,1.61158997199083,0,0,0,0,0,0,0,1.40669416410513,0.667852230137435,0,0,6.5751836122853,0.552567831062295,0,0.20453736500431,0.123084805461069,1.86623752597084,0,11.6363763539146,0,0.197286811273867,0,1.11136990144637,0,0.185536196323703,0,0,0,0,0,0,0.709163045303809,0.344743373241465,0.291604613383254,0.347249989866585,0,0.964771509003264,1.52581736317083,2.87506075821184,2.06883333267483,0.219385397153973,7.95250783688628,0,1.92375646259493,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0.498635045700469,0,0,0,0,0,0.210998064528027,0,0,3.46221823587346,1.99052386215701,3.00755719311353,4.27721101453538,1.77912677208373,0.86494757262552,0.835375596043643,0.202203398942031,7.2231988256891,0.702793337176017,0,0.19566461893209,0,0.394584402849391,8.46935012340647,0,1.26373159256976,0,0,0,0.330991955875499,0,0,0,0.138674673013139,2.42983633669183,0,0,1.39781334593624,1.71986032471617,18.2869466136371,13.7407916122029,15.1913595548437,0.581934098930517,0,1.12990370390266,0,0,0.253243183823515,0,0,1.92107695265417,0,0,0,1.37275998289572,2.0167671718341,0,0,0,0,0,0,0,0.821432273351958,0,0,0,23.4597217068694,12.8329837446543,10.0502223440754,6.38972801596772,6.43839072204856,3.79391477651183,10.547805180416,0,0,0,0,0,2.26383207483922,0.169346664131569,0.795229689809303,0.817220436669454,0.160753148465019,0.550157746388935,2.07720169014593,0,0,0.303747783290123,0,0.630445658393585,3.46200281690987,0,7.17149357331379,0,1.42939065274673,1.98627591109629,0,0,0,0,0,0.082092520749339,0,0,0,0,0.387848869084652,1.98348902614035,4.44825778499256,0,0.640724475406168,8.96064539068096,2.89967338743037,0,0,0,0,0,0.7520696820681,0,0,0,0,0.244052529803926,0.751145584238999,1.14681839138014,1.33114861844223,0.993542447062135,0.138348634936231,0,0.151649117541648,6.56570267153425,0,0,0.144921028610825,0.149254802886874,0.233713309847224,0,1.32582103692562,0.50313580350515,0,0,0.302461847526478,2.02068360757615,2.80924784980304,0.63718706865481,0.449803112163605,0,1.24411862352257,0,0.521745061811734,0.150257608997218,0,0,0.181848659202559,0.214821114084977,0,0,0,0.686791410365586,1.01024846629776,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72715170865599,0,0.138258436151731,0.194860308839388,0,0,0,2.45772908753719,0,0,0,0,0,0.184105950251841,0,0,0,2.04867141653695,0.629063767423586,0.764467467344097,0,0,0.371807292777007,0,0.636008701306837,0,0.80057074828547,0.705351887381368,0,0.642292250964595,0,0.957803154342908,0.205116364240755,1.00828678488687,0.276629009856872,0.322951291263702,4.28308260777463,0,0,0,0,0,0,0,1.20336525358812,0,0.781514011233092,0,0.163771917510097,0,0.405225507710368,0,0.826747186004736,0.380494861163441,0.546974809018219,2.74128883428591,3.96968942711435,1.58284119923659,0,0,1.3451348888753,0,1.36597314810779,0.709618961301111,0.115233987555779,0,0.271878931907327,0.394636641377094,0,0.556157009460346,0.470958557103084,0.314231179832004,0,4.56579360254748,0,0,3.14496794377288,0,0,0,0,0,0,0,6.02318302348389,0,0,0.846774100381858,0.22910686854405,0.31020638566432,0,0,0,0,0.647428837187895,0.307988420568741,1.1598144313382,3.39997695141398,0,0,7.96764608209709,0,0,0,9.41524728916925,2.18559560503957,0,1.22574160876953,0,0,0.594092800654172,0,0.169927114687817,0.281951753939561,2.38494185502236,0,0,0,0,1.46067277649303,4.58729283404541,0.573358332605805,0,0.203974470572744,0.872701380680755,7.40637576721561,0,0,0,0.252332849670158,0.546327859818478,1.77377901416012,0,0,0.0918948995348449,0,0.606229585745915,0.535928260312357,0.829169439458779,0.827463966895162,1.91910583710883,3.33290204049236,0,0.434523000071005,0,0.318235791390825,1.81905470062397,1.52401723527873,0.684466602170562,0.336760265072938,0.78894425931944,4.9899053481902,0,0,0,0,4.69281884806909,4.40069199058319,1.62758471326295,1.99727032255654,0.805095174364105,0 | |||
|short_description=p@chr12:20523363..20523367,+ | |||
}} |
Latest revision as of 07:26, 24 July 2015
Short description: | p@chr12:20523363..20523367, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:20523363..20523367, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 9.41e-09 | 5 |
basophil mast progenitor cell | 9.41e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
larynx | 3.54e-13 | 9 |
primary circulatory organ | 3.05e-09 | 27 |
subdivision of digestive tract | 1.15e-08 | 118 |
adult organism | 6.13e-08 | 114 |
primordium | 1.43e-07 | 160 |
upper respiratory tract | 2.61e-07 | 19 |
foregut | 5.62e-07 | 87 |
embryonic structure | 7.22e-07 | 564 |
germ layer | 9.80e-07 | 560 |
germ layer / neural crest | 9.80e-07 | 560 |
embryonic tissue | 9.80e-07 | 560 |
presumptive structure | 9.80e-07 | 560 |
germ layer / neural crest derived structure | 9.80e-07 | 560 |
epiblast (generic) | 9.80e-07 | 560 |