FFCP PHASE1:Hg19::chr12:279860..279871,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:279860..279871,+ | |||
|coexpression_cluster_id=C368 | |coexpression_cluster_id=C368 | ||
|description=CAGE_peak_at_chr12:279860..279871,+ | |description=CAGE_peak_at_chr12:279860..279871,+ | ||
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|ontology_enrichment_celltype=CL:0002575!1.29e-26!2;CL:0000708!7.72e-18!3;CL:0000669!3.04e-11!5;CL:0002549!1.64e-07!2 | |ontology_enrichment_celltype=CL:0002575!1.29e-26!2;CL:0000708!7.72e-18!3;CL:0000669!3.04e-11!5;CL:0002549!1.64e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002575;1.05e-79;2!CL:0000669;1.48e-40;4!CL:0000708;1.71e-14;3!CL:0002590;2.09e-14;3!CL:0002149;6.55e-08;6!CL:0002255;6.55e-08;6 | |ontology_enrichment_celltype_v019=CL:0002575;1.05e-79;2!CL:0000669;1.48e-40;4!CL:0000708;1.71e-14;3!CL:0002590;2.09e-14;3!CL:0002149;6.55e-08;6!CL:0002255;6.55e-08;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002575,1.05e-79,2;CL:0000669,1.48e-40,4;CL:0000708,1.83e-14,3;CL:0002590,2.09e-14,3;CL:0002149,6.34e-08,6;CL:0002255,6.34e-08,6 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3001;6.55e-08;6 | |ontology_enrichment_disease_v019=DOID:3001;6.55e-08;6 | ||
|ontology_enrichment_disease_v019_2=DOID:3001,6.34e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0003210!7.72e-18!3;UBERON:0000996!7.55e-14!1;UBERON:0001882!2.07e-13!1;UBERON:0005403!2.07e-13!1;UBERON:0005284!5.57e-11!5;UBERON:0009663!6.08e-08!7;UBERON:0001875!1.54e-07!2;UBERON:0006514!1.54e-07!2;UBERON:0003947!1.64e-07!2;UBERON:0005629!1.64e-07!2;UBERON:0005358!1.64e-07!2;UBERON:0001886!1.64e-07!2;UBERON:0004086!1.64e-07!2;UBERON:0005282!1.64e-07!2;UBERON:0005281!1.64e-07!2;UBERON:0002616!4.61e-07!59 | |ontology_enrichment_uberon=UBERON:0003210!7.72e-18!3;UBERON:0000996!7.55e-14!1;UBERON:0001882!2.07e-13!1;UBERON:0005403!2.07e-13!1;UBERON:0005284!5.57e-11!5;UBERON:0009663!6.08e-08!7;UBERON:0001875!1.54e-07!2;UBERON:0006514!1.54e-07!2;UBERON:0003947!1.64e-07!2;UBERON:0005629!1.64e-07!2;UBERON:0005358!1.64e-07!2;UBERON:0001886!1.64e-07!2;UBERON:0004086!1.64e-07!2;UBERON:0005282!1.64e-07!2;UBERON:0005281!1.64e-07!2;UBERON:0002616!4.61e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0003210;1.71e-14;3!UBERON:0005284;3.49e-09;5 | |ontology_enrichment_uberon_v019=UBERON:0003210;1.71e-14;3!UBERON:0005284;3.49e-09;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003210,1.83e-14,3;UBERON:0005284,3.49e-09,5 | |||
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|short_description=p@chr12:279860..279871,+ | |short_description=p@chr12:279860..279871,+ | ||
}} | }} |
Latest revision as of 07:54, 24 July 2015
Short description: | p@chr12:279860..279871, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:279860..279871, + |
Coexpression cluster: | C368_Pericytes_Fibroblast_Nucleus_Anulus_Meningeal_Mesenchymal_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 1.05e-79 | 2 |
pericyte cell | 1.48e-40 | 4 |
leptomeningeal cell | 1.83e-14 | 3 |
smooth muscle cell of the brain vasculature | 2.09e-14 | 3 |
epithelial cell of uterus | 6.34e-08 | 6 |
stromal cell of endometrium | 6.34e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
blood-cerebrospinal fluid barrier | 1.83e-14 | 3 |
brain vasculature | 3.49e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 6.34e-08 | 6 |