FFCP PHASE1:Hg19::chr12:3278109..3278123,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:3278109..3278123,+ | |||
|coexpression_cluster_id=C19 | |coexpression_cluster_id=C19 | ||
|description=CAGE_peak_at_chr12:3278109..3278123,+ | |description=CAGE_peak_at_chr12:3278109..3278123,+ | ||
|id=chr12:3278109..3278123,+ | |id=chr12:3278109..3278123,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000322;6.78e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,7.76e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060084!3.19e-08!3;DOID:127!3.19e-08!3;DOID:2394!2.11e-07!14 | |ontology_enrichment_disease=DOID:0060084!3.19e-08!3;DOID:127!3.19e-08!3;DOID:2394!2.11e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:4074;2.12e-11;2!DOID:4905;2.12e-11;2!DOID:3498;2.12e-11;2!DOID:3910;3.34e-11;2!DOID:0060084;6.78e-08;3!DOID:127;6.78e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:4074,2.02e-11,2;DOID:4905,2.02e-11,2;DOID:3498,2.02e-11,2;DOID:3910,4.09e-11,2;DOID:0060084,5.54e-08,3;DOID:127,5.54e-08,3 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;3.34e-11;2!UBERON:0002173;3.34e-11;2!UBERON:0002186;3.34e-11;2!UBERON:0004821;6.78e-08;3!UBERON:0007499;6.78e-08;3!UBERON:0003215;6.78e-08;3!UBERON:0010368;6.78e-08;3!UBERON:0009911;6.78e-08;3!UBERON:0002299;6.78e-08;3!UBERON:0006524;6.78e-08;3!UBERON:0008874;6.78e-08;3!UBERON:0002169;6.78e-08;3!UBERON:0004894;6.78e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,4.09e-11,2;UBERON:0002173,4.09e-11,2;UBERON:0002186,4.09e-11,2;UBERON:0004821,7.76e-08,3;UBERON:0003215,7.76e-08,3;UBERON:0010368,7.76e-08,3;UBERON:0009911,7.76e-08,3;UBERON:0002299,7.76e-08,3;UBERON:0006524,7.76e-08,3;UBERON:0008874,7.76e-08,3;UBERON:0002169,7.76e-08,3;UBERON:0004894,7.76e-08,3 | |||
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| ||
|short_description=p@chr12:3278109..3278123,+ | |short_description=p@chr12:3278109..3278123,+ | ||
}} | }} |
Latest revision as of 08:14, 24 July 2015
Short description: | p@chr12:3278109..3278123, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:3278109..3278123, + |
Coexpression cluster: | C19_embryonic_testis_cord_chronic_CD14_NK_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 7.76e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 4.09e-11 | 2 |
alveolar duct | 4.09e-11 | 2 |
bronchiole | 4.09e-11 | 2 |
pulmonary alveolus epithelium | 7.76e-08 | 3 |
alveolus | 7.76e-08 | 3 |
pulmonary lobule | 7.76e-08 | 3 |
lobule | 7.76e-08 | 3 |
alveolus of lung | 7.76e-08 | 3 |
alveolar system | 7.76e-08 | 3 |
pulmonary acinus | 7.76e-08 | 3 |
alveolar sac | 7.76e-08 | 3 |
alveolar wall | 7.76e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
pancreas adenocarcinoma | 2.02e-11 | 2 |
pancreatic carcinoma | 2.02e-11 | 2 |
pancreatic ductal adenocarcinoma | 2.02e-11 | 2 |
lung adenocarcinoma | 4.09e-11 | 2 |
cell type benign neoplasm | 5.54e-08 | 3 |
leiomyoma | 5.54e-08 | 3 |