FFCP PHASE1:Hg19::chr12:41374821..41374828,+: Difference between revisions
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|id=chr12:41374821..41374828,+
|short_description=p@chr12:41374821..41374828,+
|description=CAGE_peak_at_chr12:41374821..41374828,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:41374821..41374828,+ | |||
|coexpression_cluster_id=C139 | |||
|description=CAGE_peak_at_chr12:41374821..41374828,+ | |||
|id=chr12:41374821..41374828,+ | |||
|ontology_enrichment_celltype=CL:0002605!5.19e-13!3;CL:0000128!3.08e-12!7;CL:0000126!3.08e-12!7;CL:0000127!3.08e-12!7;CL:0002453!3.08e-12!7;CL:0002319!2.16e-11!25;CL:0000243!1.35e-08!15;CL:0000125!1.35e-08!15;CL:0000030!1.35e-08!15;CL:0000339!1.35e-08!15;CL:0000095!1.06e-07!17;CL:0000123!1.06e-07!17;CL:0000221!9.63e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000128;1.78e-29;7!CL:0000126;1.78e-29;7!CL:0000127;1.78e-29;7!CL:0000243;4.22e-13;15!CL:0000125;4.22e-13;15!CL:0000095;6.95e-12;17!CL:0002319;8.32e-09;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,1.78e-29,7;CL:0000126,1.78e-29,7;CL:0000127,1.78e-29,7;CL:0002453,1.78e-29,7;CL:0000243,4.22e-13,15;CL:0000125,4.22e-13,15;CL:0000030,4.22e-13,15;CL:0000339,4.22e-13,15;CL:0000095,6.95e-12,17;CL:0000123,6.95e-12,17;CL:0002319,8.32e-09,25 | |||
|ontology_enrichment_development_v019=UBERON:0006238;2.25e-19;10!CL:0000339;4.22e-13;15 | |||
|ontology_enrichment_disease=DOID:178!3.40e-10!1;DOID:326!3.40e-10!1;DOID:3978!3.40e-10!1;DOID:3394!3.40e-10!1;DOID:5844!3.40e-10!1 | |||
|ontology_enrichment_disease_v019=DOID:3093;6.76e-18;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,6.76e-18,11 | |||
|ontology_enrichment_uberon=UBERON:0001017!8.74e-18!82;UBERON:0005743!7.20e-17!86;UBERON:0000955!1.67e-15!69;UBERON:0006238!1.67e-15!69;UBERON:0000073!4.39e-15!94;UBERON:0001016!4.39e-15!94;UBERON:0001049!2.69e-13!57;UBERON:0005068!2.69e-13!57;UBERON:0006241!2.69e-13!57;UBERON:0007135!2.69e-13!57;UBERON:0002616!8.38e-13!59;UBERON:0001869!4.64e-12!32;UBERON:0001893!2.50e-11!34;UBERON:0007190!8.99e-10!1;UBERON:0001882!9.82e-10!1;UBERON:0005403!9.82e-10!1;UBERON:0002022!1.17e-09!1;UBERON:0000033!1.78e-09!123;UBERON:0002780!2.56e-09!41;UBERON:0001890!2.56e-09!41;UBERON:0006240!2.56e-09!41;UBERON:0003080!4.39e-09!42;UBERON:0000153!6.10e-09!129;UBERON:0007811!6.10e-09!129;UBERON:0004121!9.04e-09!169;UBERON:0002791!1.01e-08!33;UBERON:0000924!1.64e-08!173;UBERON:0006601!1.64e-08!173;UBERON:0002020!1.85e-08!34;UBERON:0003528!1.85e-08!34;UBERON:0003075!2.33e-08!86;UBERON:0007284!2.33e-08!86;UBERON:0000956!3.02e-08!25;UBERON:0000203!3.02e-08!25;UBERON:0002346!6.33e-08!90;UBERON:0000349!1.02e-07!5;UBERON:0004733!5.15e-07!12;UBERON:0002028!5.15e-07!12;UBERON:0007277!5.15e-07!12;UBERON:0002037!9.42e-07!6;UBERON:0006215!9.42e-07!6 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr12:41374821..41374828,+ | |||
}} | }} |
Latest revision as of 08:26, 24 July 2015
Short description: | p@chr12:41374821..41374828, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:41374821..41374828, + |
Coexpression cluster: | C139_astrocytoma_skin_salivary_gall_serous_Mallassezderived_renal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 1.78e-29 | 7 |
macroglial cell | 1.78e-29 | 7 |
astrocyte | 1.78e-29 | 7 |
oligodendrocyte precursor cell | 1.78e-29 | 7 |
glial cell (sensu Vertebrata) | 4.22e-13 | 15 |
glial cell | 4.22e-13 | 15 |
glioblast | 4.22e-13 | 15 |
glioblast (sensu Vertebrata) | 4.22e-13 | 15 |
neuron associated cell | 6.95e-12 | 17 |
neuron associated cell (sensu Vertebrata) | 6.95e-12 | 17 |
neural cell | 8.32e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 6.76e-18 | 11 |