FFCP PHASE1:Hg19::chr12:46808984..46808989,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:46808984..46808989,+ | |||
|description=CAGE_peak_at_chr12:46808984..46808989,+ | |description=CAGE_peak_at_chr12:46808984..46808989,+ | ||
|id=chr12:46808984..46808989,+ | |id=chr12:46808984..46808989,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000784;2.41e-08;3!CL:0000594;2.41e-08;3!CL:0000236;5.47e-07;13!CL:0000313;7.13e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000594,1.38e-08,3;CL:0000784,1.60e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0010115;7.13e-07;1!UBERON:0004874;7.13e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4468;4.36e-12;2!DOID:3371;2.08e-07;1!DOID:4549;2.08e-07;1!DOID:5861;2.08e-07;1!DOID:6496;2.08e-07;1!DOID:1799;7.13e-07;1!DOID:10165;7.13e-07;1!DOID:2152;7.13e-07;1!DOID:1798;7.13e-07;1!DOID:3369;7.13e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,8.57e-12,2;DOID:3371,2.09e-07,1;DOID:4549,2.09e-07,1;DOID:5861,2.09e-07,1;DOID:6496,2.09e-07,1;DOID:3369,6.02e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0005409!3.21e-07!35 | |ontology_enrichment_uberon=UBERON:0005409!3.21e-07!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0006947;2.41e-08;3!UBERON:0004054;2.41e-08;3!UBERON:0002363;7.13e-07;1!UBERON:0001000;7.13e-07;1!UBERON:0000989;7.13e-07;1!UBERON:0001301;7.13e-07;1!UBERON:0004911;7.13e-07;1!UBERON:0008811;7.13e-07;1!UBERON:0005352;7.13e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,2.91e-08,3;UBERON:0004054,2.91e-08,3;UBERON:0000989,3.36e-07,1;UBERON:0008811,3.36e-07,1;UBERON:0006258,3.36e-07,1;UBERON:0005876,3.36e-07,1;UBERON:0004874,3.36e-07,1;UBERON:0001000,5.37e-07,1;UBERON:0005352,5.37e-07,1;UBERON:0002363,8.02e-07,1;UBERON:0007645,8.02e-07,1;UBERON:0007647,8.02e-07,1;UBERON:0010115,8.02e-07,1 | |||
|phase1_expression=0.54503513781167,0.214100523890983,1.40954404095971,0,0.446961094427288,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0.572471974262113,0.684372125364421,0.376627918784408,0.305653622991805,0.164201178899891,0.550975469195755,0,0,0.154816123316076,0,0,0,0.0774672005803016,0.284338464974843,0.587200878669695,0,0.401088894940283,0,0,0.32389366601898,0,0,0,0,0,0.822335776043652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0.600707571366025,0.16072558669708,0,0,0.182664153764634,1.75996244461323,1.09227722252426,0,1.70692089026603,0.400395987036012,1.14950487990897,0,0,0.569212969109448,0,0.764546456250458,0,0,0.526768169550154,0.196709770113833,0.393010762749165,0,0.167186495390678,0,0.946895611469467,3.89653456815823,0.222820913770347,0,0,0.812411591295047,0.768547918354051,1.43065282315866,3.4531959966772,1.93445012450094,0,0.444859689486181,1.87278579662799,0,0.113309342697566,0,0,0.253019692019503,0,0.651083453856419,0,0.150575119077773,0.127986611154418,0,0.473554504088034,0,0,0.267440195783507,0.144824403882799,0,0,0,0.361439152384566,0,0.144846518960824,0,0.486634870302636,0.567208902984407,0.665188192387692,0.614843499851882,0.261958150995425,0,0,0,0,0,1.43094374583205,0,1.85728750664782,0,0,0,0,0,0,0,0.516833518338658,0.35576626268671,0,0,0,0.24406205754817,0,0,0.625098097988558,0,0.450445921933289,0,0,0,0,0,0,1.49091585508596,0,1.45650098894541,0.573673241497627,0,0,0,0,0.311211035399766,0,0,0.151357427644931,0,0,0,0,0,0.23486899728753,0.161872944368132,0.140450806702248,0.61246251376468,0,0.103325781175765,0,0.247266929278557,0,0,0,0.375355559615893,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0.18611685633159,0.675105328965065,0,0.757301322732344,0.0920498986422993,0.323292113637624,0.355009592516614,0.302256294682921,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0.882926198829301,0.122988438543114,0,0,0,0,0,0,0,0,0,0.234817388471643,0.288732895522148,0.462985512576611,0.570762456703795,0.790204397959275,0,0.246217006087397,0,0,0,0.16798212819886,0,0.358234090811393,0.290633938513962,0.383382679165211,0,0.088048434013226,0,0.144119953416961,0.12624243342638,0.063497894292169,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0,0,0,0,0.199945982364114,0,0.502257091432126,0,0.479249710983165,0,0,0.144781306667579,0.205476322550383,0.358121926479791,0.224170287987055,0.197030760201927,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.356857977594324,0.630809660135739,0.937131319941706,0,0,0,0,0,0.347534457872331,0.195801157462741,0,0.82707210449155,0.862856803274467,0.106727557803444,0,0,0,0.248107807818777,0.920771839728375,0,0.640695746278505,0,0.160853921143607,0,0.154209693802656,0,0.0821271560138091,0.519254429183621,0.116210378459959,0.120859449591622,0.200506470303285,0,0,0,0.131124414959424,0,0.15403067420883,0,0,0,0,0.340187410553031,0,0,0,0,0,0,0,0,0.261435451024901,0.256450125116389,0,0,0.206082023295445,0.27470839445503,0.330037999682352,0,0,0,0.096670718292122,0.154048617114644,0.460511024178389,0.275673144969061,1.82614416276065,1.59518363305651,0.426133137080504,0,0,0.192190067365106,3.44554323735377,0,0,0,0,0,0,0,0,0.143124886741991,0.372158369359667,0,0,0,0,0,0,0.719489830333259,0.54907405947211,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.470719003883896,0,0,0,0.229723400206959,0,1.52927441428475,0.569647187174163,0.238231775457789,0,0.648473311192717,0.540031437238115,0,0.106824071127473,0,0,0.557409525377156,0,0.569134746787313,0,0.199579371432817,0.191505370132367,0.846694330895531,0,0.280797178113459,0.912938716132769,0,0,0.338583555603207,0,0,0.425846237690326,0,0.921722292925374,0,0.667396566847634,0,0,0,0.270455678475983,0,0,0,0.146508179271894,0.242721043499027,0.557216921387392,0.852408440419239,0,0.296964680832639,0,0,0.703347082052564,0.890469640183247,0.16480387422676,0,0,0.552567831062295,0,0.409074730008619,0.615424027305347,0,0,0.358042349351218,2.04628948090749,0.0986434056369336,0,0,0,0.0927680981618513,0,0.260427761085233,0.349839999984783,0,0.1137934482855,1.01701460117107,2.36387681767936,0.689486746482929,0.583209226766509,0,0,0.120596438625408,0,0,0,0,0.32681539055697,0.139423744278603,0.384751292518985,0.113942055847001,0,0.897576444097721,1.3037684630641,0,0,0,0,0.156980256395025,0,0.451191321234361,0,0,0.569261198172555,0.317873157960757,1.05499032264014,1.30586246527318,0,0.432777279484182,0.995261931078505,0.707660516026713,1.22206028986725,0.593042257361244,0,0.208843899010911,0.404406797884062,0.802577647298789,0,0,0.391329237864179,0.242780379534093,1.57833761139756,1.20990716048664,0.30607276163049,1.32691817219825,0.300646838828985,0,0,0.661983911750998,0.313932918407225,0,0,0,0.173559738335131,0.195984794828755,0.783532859223623,1.04836000945218,0.171986032471617,0.19351266257817,0,0.0821154570532092,0.19397803297683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| ||
|short_description=p@chr12:46808984..46808989,+ | |short_description=p@chr12:46808984..46808989,+ | ||
}} | }} |
Latest revision as of 08:41, 24 July 2015
Short description: | p@chr12:46808984..46808989, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:46808984..46808989, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle satellite cell | 1.38e-08 | 3 |
plasmacytoid dendritic cell | 1.60e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 2.91e-08 | 3 |
internal male genitalia | 2.91e-08 | 3 |
penis | 3.36e-07 | 1 |
intromittent organ | 3.36e-07 | 1 |
lateral plate mesenchyme | 3.36e-07 | 1 |
undifferentiated genital tubercle | 3.36e-07 | 1 |
somatopleure | 3.36e-07 | 1 |
vas deferens | 5.37e-07 | 1 |
spermatic cord | 5.37e-07 | 1 |
dura mater | 8.02e-07 | 1 |
future meninx | 8.02e-07 | 1 |
ectomeninx | 8.02e-07 | 1 |
future dura mater | 8.02e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 8.57e-12 | 2 |
chondrosarcoma | 2.09e-07 | 1 |
extraosseous chondrosarcoma | 2.09e-07 | 1 |
myxoid chondrosarcoma | 2.09e-07 | 1 |
extraskeletal myxoid chondrosarcoma | 2.09e-07 | 1 |
peripheral primitive neuroectodermal tumor | 6.02e-07 | 1 |