FFCP PHASE1:Hg19::chr12:52680109..52680121,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:52680109..52680121,- | |||
|coexpression_cluster_id=C526 | |||
|description=CAGE_peak_at_chr12:52680109..52680121,- | |||
|id=chr12:52680109..52680121,- | |||
|ontology_enrichment_celltype=CL:1000415!1.39e-10!2;CL:0002231!1.11e-07!3;CL:0000322!2.12e-07!3;CL:0000066!3.79e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0002379;4.72e-17;1!CL:0002535;6.42e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002379,4.72e-17,1;CL:0002535,5.08e-09,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!2.56e-09!106;DOID:0050687!5.30e-09!143;DOID:162!5.38e-08!235;DOID:14566!1.03e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:3620;4.72e-17;1!DOID:3565;4.72e-17;1!DOID:4362;4.12e-13;5!DOID:154;6.42e-09;2!DOID:4236;6.42e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,4.72e-17,1;DOID:3565,4.72e-17,1;DOID:4362,4.13e-13,5;DOID:154,4.70e-09,2;DOID:4236,4.70e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0002294!2.40e-17!7;UBERON:0001173!2.40e-17!7;UBERON:0004912!2.40e-17!7;UBERON:0002394!8.86e-12!4;UBERON:0003928!8.86e-12!4;UBERON:0005153!3.96e-09!37;UBERON:0003929!1.08e-08!54;UBERON:0005911!1.48e-08!82;UBERON:0004821!2.12e-07!3;UBERON:0003215!2.12e-07!3;UBERON:0002299!2.12e-07!3;UBERON:0006524!2.12e-07!3;UBERON:0008874!2.12e-07!3;UBERON:0002169!2.12e-07!3;UBERON:0004894!2.12e-07!3;UBERON:0002110!2.49e-07!3;UBERON:0006242!2.49e-07!3;UBERON:0002367!2.69e-07!11;UBERON:0010147!2.69e-07!11;UBERON:0009846!2.69e-07!11;UBERON:0003353!2.69e-07!11;UBERON:0004902!2.69e-07!11;UBERON:0003820!2.69e-07!11;UBERON:0009847!2.69e-07!11;UBERON:0000077!6.92e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0002394;2.63e-16;4!UBERON:0003928;2.63e-16;4!UBERON:0000002;4.37e-11;6!UBERON:0001560;4.37e-11;6!UBERON:0002294;9.94e-10;7!UBERON:0001173;9.94e-10;7!UBERON:0006955;6.42e-09;2!UBERON:0004801;6.42e-09;2!UBERON:0000058;4.52e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,3.06e-11,6;UBERON:0003928,3.06e-11,6;UBERON:0000002,4.37e-11,6;UBERON:0001560,4.37e-11,6;UBERON:0006955,5.08e-09,2;UBERON:0004801,5.08e-09,2;UBERON:0000058,7.11e-08,19;UBERON:0002294,8.60e-08,9;UBERON:0001173,8.60e-08,9;UBERON:0004912,8.60e-08,9 | |||
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|short_description=p@chr12:52680109..52680121,- | |||
}} | }} |
Latest revision as of 09:31, 24 July 2015
Short description: | p@chr12:52680109..52680121, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:52680109..52680121, - |
Coexpression cluster: | C526_meningioma_bile_cervical_fibrosarcoma_prostate_epidermoid_lung |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meningothelial cell | 4.72e-17 | 1 |
epithelial cell of cervix | 5.08e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
bile duct | 3.06e-11 | 6 |
digestive system duct | 3.06e-11 | 6 |
uterine cervix | 4.37e-11 | 6 |
neck of organ | 4.37e-11 | 6 |
uterine epithelium | 5.08e-09 | 2 |
cervix epithelium | 5.08e-09 | 2 |
duct | 7.11e-08 | 19 |
biliary system | 8.60e-08 | 9 |
biliary tree | 8.60e-08 | 9 |
biliary bud | 8.60e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 4.72e-17 | 1 |
meningioma | 4.72e-17 | 1 |
cervical cancer | 4.13e-13 | 5 |
mixed cell type cancer | 4.70e-09 | 2 |
carcinosarcoma | 4.70e-09 | 2 |