FFCP PHASE1:Hg19::chr12:53608342..53608354,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:53608342..53608354,+ | |||
|description=CAGE_peak_at_chr12:53608342..53608354,+ | |description=CAGE_peak_at_chr12:53608342..53608354,+ | ||
|id=chr12:53608342..53608354,+ | |id=chr12:53608342..53608354,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.62e-12!180;CL:0000057!2.96e-08!75 | |ontology_enrichment_celltype=CL:0000055!3.62e-12!180;CL:0000057!2.96e-08!75 | ||
|ontology_enrichment_celltype_v019=CL:0000153;8.25e-15;9!CL:0000447;8.25e-15;9!CL:0000327;1.81e-13;15!CL:0000499;2.09e-13;28!CL:0000214;6.71e-12;3!CL:0000135;1.28e-11;3!CL:0000388;1.28e-11;3!CL:0002601;2.44e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,4.13e-15,9;CL:0000447,4.13e-15,9;CL:0000327,8.93e-14,15;CL:0000499,1.11e-13,28;CL:0000214,4.12e-12,3;CL:0000135,9.32e-12,3;CL:0000388,9.32e-12,3;CL:0002601,1.56e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0003099;2.44e-09;1!UBERON:0003852;2.44e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3151;2.44e-09;1!DOID:3149;2.44e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,5.72e-09,1;DOID:3149,5.72e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0003102!2.47e-08!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0006915;6.71e-12;3!UBERON:0007616;6.71e-12;3!UBERON:0002217;6.71e-12;3!UBERON:0002018;6.71e-12;3!UBERON:0007846;1.28e-11;3!UBERON:0000043;1.28e-11;3!UBERON:0007845;1.28e-11;3!UBERON:0005705;2.44e-09;1!UBERON:0008193;2.44e-09;1!UBERON:0010912;2.44e-09;1!UBERON:0002514;2.44e-09;1!UBERON:0003457;2.44e-09;1!UBERON:0008907;2.44e-09;1!UBERON:0008001;2.44e-09;1!UBERON:0007213;2.44e-09;1!UBERON:0009891;2.44e-09;1!UBERON:0007914;2.44e-09;1!UBERON:0007375;2.44e-09;1!UBERON:0003323;2.44e-09;1!UBERON:0010258;2.44e-09;1!UBERON:0005253;2.44e-09;1!UBERON:0007842;2.44e-09;1!UBERON:0002397;2.44e-09;1!UBERON:0003113;2.44e-09;1!UBERON:0003277;2.44e-09;1!UBERON:0001709;2.44e-09;1!UBERON:0002244;2.44e-09;1!UBERON:0005620;2.44e-09;1!UBERON:0010364;2.44e-09;1!UBERON:0004288;2.44e-09;1!UBERON:0011137;4.46e-07;11!UBERON:0010323;4.46e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,4.12e-12,3;UBERON:0007616,4.12e-12,3;UBERON:0002217,4.12e-12,3;UBERON:0002018,4.12e-12,3;UBERON:0007846,9.32e-12,3;UBERON:0000043,9.32e-12,3;UBERON:0007845,9.32e-12,3;UBERON:0005705,1.69e-09,1;UBERON:0008193,1.69e-09,1;UBERON:0010912,1.69e-09,1;UBERON:0002514,1.69e-09,1;UBERON:0003457,1.69e-09,1;UBERON:0008907,1.69e-09,1;UBERON:0008001,1.69e-09,1;UBERON:0007213,1.69e-09,1;UBERON:0009891,1.69e-09,1;UBERON:0007914,1.69e-09,1;UBERON:0009292,1.69e-09,1;UBERON:0003099,1.69e-09,1;UBERON:0007375,1.69e-09,1;UBERON:0003323,1.69e-09,1;UBERON:0010258,1.69e-09,1;UBERON:0007842,1.69e-09,1;UBERON:0009494,1.69e-09,1;UBERON:0010042,1.69e-09,1;UBERON:0010045,1.69e-09,1;UBERON:0010259,1.69e-09,1;UBERON:0010359,1.69e-09,1;UBERON:0009526,1.69e-09,1;UBERON:0002397,1.69e-09,1;UBERON:0003113,1.69e-09,1;UBERON:0003277,1.69e-09,1;UBERON:0001709,1.69e-09,1;UBERON:0004066,1.69e-09,1;UBERON:0002244,1.69e-09,1;UBERON:0005620,1.69e-09,1;UBERON:0004362,1.69e-09,1;UBERON:0010364,1.69e-09,1;UBERON:0010046,1.69e-09,1;UBERON:0005868,1.69e-09,1;UBERON:0007238,1.69e-09,1;UBERON:0004288,1.69e-09,1;UBERON:0004068,1.69e-09,1;UBERON:0010334,1.69e-09,1;UBERON:0003852,1.69e-09,1;UBERON:0010253,1.69e-09,1;UBERON:0010323,5.12e-07,11 | |||
|phase1_expression=0.181678379270557,0.856402095563933,0.281908808191942,0,0,0.872338524100369,0,0,0,0.245733936501509,0.697801167972428,0,0.263766978228454,0.123766352960047,0.331397375727916,0,0,0,0,0.246242116153576,0.204000691244253,0.313454721478088,0,0.136874425072884,0.125542639594803,0.0764134057479513,0,0,0,0,0,0.919421224478927,0.90361775633475,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0.564727018627814,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.393010762749165,0,0,0,0,0,0,0,0,0,0.640456598628376,0.260118695119756,0.657751618414705,0.552700035571697,0,0,0.267540828089713,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0.12786256184353,3.61439152384566,0,1.88300474649071,0,0.486634870302636,0,0,0.087834785693126,0.0654895377488563,1.45718115317017,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0.419499436209906,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0.506522046658319,0.132409180813219,0,0.709336764396714,0.560677600142307,0,0.24666754841716,0,0,0,0.151357427644931,0,0.234321431833797,1.24864030732128,0,0.448346041655403,0.117434498643765,0.323745888736263,0.421352420106746,0.204154171254893,0.859840221182376,0,1.18800285728205,0.247266929278557,0,0,1.0100166837244,0.250237039743928,0.277064115484183,0,1.22595118319608,0.150238058906597,0.113432183160021,0.717558542755448,0,0.423863802319124,0.600182192168805,0,0.257640540045629,0.744467425326359,0.506328996723799,0.779496041289589,0,0.276149695926898,0.323292113637624,0,0.201504196455281,0.169560592310488,0.193260853163297,0,0,0,0,0.232387885739037,0.10366105501537,0.252320850875628,0.36497735907583,0,1.28648187638577,0,0,0,0.591534000199219,0,0,0.661763836394364,0,0,0.404493924480493,0,0,0.738155454624648,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0.502644862058154,0.0925884451585296,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0.358234090811393,0.581267877027924,0,0,0.088048434013226,0,0,0.12624243342638,0.063497894292169,0,0,0,0.102827492703324,0.300343057843917,0.571652865261156,0,0,0,0,0,0,0,0,0.514414748524284,0,0,0,0,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0.500170521059677,0.542530047399471,0.831883446123229,1.60586089917446,2.68094105557689,0.702848489956279,0.601892199455438,0,0,0.664225598535437,0.184369168541703,0.521301686808497,0,0,0,0,0.106727557803444,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0.160853921143607,0,0,0,0,0.519254429183621,1.16210378459959,0,0.601519410909855,0.184161977871793,0.229628896329213,0,0.524497659837696,0.451199612907412,0.15403067420883,0,0,0.105551628892876,0,0.170093705276516,0,0,0.270946437543853,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0.165018999841176,0,0,0,0.096670718292122,0.154048617114644,0.307007349452259,0.551346289938122,0.537101224341368,0,0.170453254832202,0.267096106940212,0.330569830721956,0.192190067365106,0.127612712494584,0,0,0,0.6970372701606,0.616067160352178,0.532306030317022,0,0.18532421910392,0,0.372158369359667,0.316379424718726,0,0,0,0.95460974377781,0.78494864019923,0.179872457583315,0,0,0.202182481573316,0,0,0.48763373908959,0.487426979262569,1.05650146756755,0.409499734223957,0.141405431953713,0,0,0,0.876901770507525,0,0,0,0,0.281695602532241,0.286822704408103,0.392996164052485,0,1.41904425628239,2.53329162357197,1.64647446479951,0,0.349934720244983,0.0962221127255121,0,1.08890984861323,0.188287601553558,0,0,0.443430153536676,0.229723400206959,0,0,0.569647187174163,0,0,0.648473311192717,0.540031437238115,0.79312517629427,0.213648142254946,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0.111443384277478,0.284136146806413,0.47748896947538,0,1.22864280839693,0,0.140669416410513,0.333926115068718,0.16480387422676,0,0.19924798825107,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0.568967241427498,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0.975966209950223,0.0769502585037971,0.227884111694002,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0.247127877893006,0.208843899010911,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0.970722711091971,0.173559738335131,0.0979923974143777,0.0870592065804026,0,0.171986032471617,0.0967563312890851,0.146178634172371,0.164230914106418,0.387956065953678,0.0882561266915003,0,0,0.397429223405979,0,0.391102765469606,0,0,0.599428828746391,0,0,0,0,0.124252535565433,0.471388069233591,0.135904206073614,0,0.203996435272644,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0.321506296930038,1.10031549277787,0,0,0,0,1.0063040627978,0.0788057072991982,0.0524545881349981,0.211200673038813,0.179287339332845,0.191915197319445,0,0,0.25426853765475,0,0,0,0,0,0.170388021785422,0,0.146552233678082,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454947352624943,0.285465333544967,0.470531639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| ||
|short_description=p@chr12:53608342..53608354,+ | |short_description=p@chr12:53608342..53608354,+ | ||
}} | }} |
Latest revision as of 09:48, 24 July 2015
Short description: | p@chr12:53608342..53608354, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:53608342..53608354, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 4.13e-15 | 9 |
carbohydrate secreting cell | 4.13e-15 | 9 |
extracellular matrix secreting cell | 8.93e-14 | 15 |
stromal cell | 1.11e-13 | 28 |
synovial cell | 4.12e-12 | 3 |
fibrocyte | 9.32e-12 | 3 |
tendon cell | 9.32e-12 | 3 |
uterine smooth muscle cell | 1.56e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 5.72e-09 | 1 |
keratoacanthoma | 5.72e-09 | 1 |