FFCP PHASE1:Hg19::chr12:65673063..65673073,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:65673063..65673073,+ | |||
|coexpression_cluster_id=C38 | |||
|description=CAGE_peak_at_chr12:65673063..65673073,+ | |description=CAGE_peak_at_chr12:65673063..65673073,+ | ||
|id=chr12:65673063..65673073,+ | |id=chr12:65673063..65673073,+ | ||
|ontology_enrichment_celltype=CL:0002589!1.71e-12!2;CL:0001024!1.98e-07!1;CL:0002557!6.49e-07!1;CL:0002574!7.29e-07!1 | |ontology_enrichment_celltype=CL:0002589!1.71e-12!2;CL:0001024!1.98e-07!1;CL:0002557!6.49e-07!1;CL:0002574!7.29e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000138;1.22e-09;6!CL:0000153;7.48e-07;9!CL:0000447;7.48e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,1.22e-09,6;CL:0000138,1.22e-09,6;CL:0000153,7.48e-07,9;CL:0000447,7.48e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1325!5.24e-08!7;DOID:3904!5.24e-08!7;DOID:3371!1.46e-07!1;DOID:4549!1.46e-07!1;DOID:5861!1.46e-07!1;DOID:6496!1.46e-07!1;DOID:6193!4.06e-07!1 | |ontology_enrichment_disease=DOID:1325!5.24e-08!7;DOID:3904!5.24e-08!7;DOID:3371!1.46e-07!1;DOID:4549!1.46e-07!1;DOID:5861!1.46e-07!1;DOID:6496!1.46e-07!1;DOID:6193!4.06e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:3371;1.46e-50;1!DOID:4549;1.46e-50;1!DOID:5861;1.46e-50;1!DOID:6496;1.46e-50;1!DOID:201;1.22e-09;6!DOID:0060100;1.22e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.46e-50,1;DOID:4549,1.46e-50,1;DOID:5861,1.46e-50,1;DOID:6496,1.46e-50,1;DOID:201,1.22e-09,6;DOID:0060100,1.22e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0001529!1.71e-12!2;UBERON:0007204!1.71e-12!2;UBERON:0002171!2.37e-07!1;UBERON:0006518!2.37e-07!1;UBERON:0008949!2.37e-07!1;UBERON:0000101!2.37e-07!1;UBERON:0002167!2.37e-07!1;UBERON:0001282!6.12e-07!1;UBERON:0009842!6.12e-07!1;UBERON:0003704!6.12e-07!1;UBERON:0001171!6.12e-07!1;UBERON:0001172!6.12e-07!1 | |ontology_enrichment_uberon=UBERON:0001529!1.71e-12!2;UBERON:0007204!1.71e-12!2;UBERON:0002171!2.37e-07!1;UBERON:0006518!2.37e-07!1;UBERON:0008949!2.37e-07!1;UBERON:0000101!2.37e-07!1;UBERON:0002167!2.37e-07!1;UBERON:0001282!6.12e-07!1;UBERON:0009842!6.12e-07!1;UBERON:0003704!6.12e-07!1;UBERON:0001171!6.12e-07!1;UBERON:0001172!6.12e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0002418;6.76e-18;3!UBERON:0004755;6.76e-18;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002418,6.76e-18,3;UBERON:0004755,6.76e-18,3 | |||
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|short_description=p@chr12:65673063..65673073,+ | |short_description=p@chr12:65673063..65673073,+ | ||
}} | }} |
Latest revision as of 11:24, 24 July 2015
Short description: | p@chr12:65673063..65673073, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:65673063..65673073, + |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 1.22e-09 | 6 |
chondrocyte | 1.22e-09 | 6 |
GAG secreting cell | 7.48e-07 | 9 |
carbohydrate secreting cell | 7.48e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cartilage tissue | 6.76e-18 | 3 |
skeletal tissue | 6.76e-18 | 3 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.46e-50 | 1 |
extraosseous chondrosarcoma | 1.46e-50 | 1 |
myxoid chondrosarcoma | 1.46e-50 | 1 |
extraskeletal myxoid chondrosarcoma | 1.46e-50 | 1 |
connective tissue cancer | 1.22e-09 | 6 |
musculoskeletal system cancer | 1.22e-09 | 6 |