FFCP PHASE1:Hg19::chr12:8765415..8765422,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=57379 | |EntrezGene=entrezgene:57379 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=13203 | |HGNC=HGNC:13203 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=-18bp_to_ENST00000545576_5end | |association_with_transcript=-18bp_to_ENST00000545576_5end | ||
|cluster_id=chr12:8765415..8765422,- | |||
|coexpression_cluster_id=C62 | |coexpression_cluster_id=C62 | ||
|description=CAGE_peak_4_at_AICDA_5end | |description=CAGE_peak_4_at_AICDA_5end | ||
Revision as of 13:08, 24 July 2015
| Short description: | p4@AICDA |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_4_at_AICDA_5end |
| Coexpression cluster: | C62_Burkitt_tonsil_CD19_submaxillary_spleen_salivary_lymph |
| Association with transcript: | -18bp_to_ENST00000545576_5end |
| EntrezGene: | 57379 |
| HGNC: | 13203 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p4@AICDA |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| B-1 B cell | 2.21e-40 | 1 |
| lymphocyte of B lineage | 5.93e-27 | 24 |
| pro-B cell | 5.93e-27 | 24 |
| mature B cell | 5.70e-21 | 2 |
| pre-B-II cell | 5.70e-21 | 2 |
| transitional stage B cell | 5.70e-21 | 2 |
| small pre-B-II cell | 5.70e-21 | 2 |
| immature B cell | 5.70e-21 | 2 |
| precursor B cell | 1.83e-14 | 3 |
| lymphoid lineage restricted progenitor cell | 7.25e-13 | 52 |
Showing 1 to 10 of 12 entries
| Ontology term | p-value | n |
|---|---|---|
| vermiform appendix | 1.48e-40 | 1 |
| caecum | 1.48e-40 | 1 |
| midgut | 1.48e-40 | 1 |
| lower digestive tract | 2.97e-09 | 5 |
Showing 1 to 4 of 4 entries
| Ontology term | p-value | n |
|---|---|---|
| lymphatic system cancer | 2.21e-40 | 1 |
| lymphosarcoma | 2.21e-40 | 1 |
| genetic disease | 3.30e-40 | 1 |
| monogenic disease | 3.30e-40 | 1 |
| xeroderma pigmentosum | 3.30e-40 | 1 |
| lymphoma | 2.70e-36 | 10 |
| hematologic cancer | 8.20e-08 | 51 |
| immune system cancer | 8.20e-08 | 51 |
Showing 1 to 8 of 8 entries
