FFCP PHASE1:Hg19::chr13:23404401..23404405,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:23404401..23404405,+ | |||
|coexpression_cluster_id=C112 | |coexpression_cluster_id=C112 | ||
|description=CAGE_peak_at_chr13:23404401..23404405,+ | |description=CAGE_peak_at_chr13:23404401..23404405,+ | ||
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|ontology_enrichment_celltype=CL:0002178!1.60e-14!3;CL:0000667!5.92e-08!6;CL:0000058!5.92e-08!6;CL:0000138!5.92e-08!6 | |ontology_enrichment_celltype=CL:0002178!1.60e-14!3;CL:0000667!5.92e-08!6;CL:0000058!5.92e-08!6;CL:0000138!5.92e-08!6 | ||
|ontology_enrichment_celltype_v019=CL:0000138;9.07e-18;6!CL:0000153;2.45e-12;9!CL:0000447;2.45e-12;9!CL:0000327;5.93e-08;15 | |ontology_enrichment_celltype_v019=CL:0000138;9.07e-18;6!CL:0000153;2.45e-12;9!CL:0000447;2.45e-12;9!CL:0000327;5.93e-08;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000058,9.07e-18,6;CL:0000138,9.07e-18,6;CL:0000153,2.45e-12,9;CL:0000447,2.45e-12,9;CL:0000327,5.93e-08,15 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:3371!9.91e-41!1;DOID:4549!9.91e-41!1;DOID:5861!9.91e-41!1;DOID:6496!9.91e-41!1;DOID:3493!4.66e-21!2;DOID:3119!2.12e-12!14;DOID:5409!3.79e-11!4;DOID:201!5.92e-08!6;DOID:0060100!5.92e-08!6;DOID:1325!6.39e-07!7;DOID:3904!6.39e-07!7 | |ontology_enrichment_disease=DOID:3371!9.91e-41!1;DOID:4549!9.91e-41!1;DOID:5861!9.91e-41!1;DOID:6496!9.91e-41!1;DOID:3493!4.66e-21!2;DOID:3119!2.12e-12!14;DOID:5409!3.79e-11!4;DOID:201!5.92e-08!6;DOID:0060100!5.92e-08!6;DOID:1325!6.39e-07!7;DOID:3904!6.39e-07!7 | ||
|ontology_enrichment_disease_v019=DOID:3371;2.55e-98;1!DOID:4549;2.55e-98;1!DOID:5861;2.55e-98;1!DOID:6496;2.55e-98;1!DOID:201;9.07e-18;6!DOID:0060100;9.07e-18;6!DOID:3119;1.86e-08;14 | |ontology_enrichment_disease_v019=DOID:3371;2.55e-98;1!DOID:4549;2.55e-98;1!DOID:5861;2.55e-98;1!DOID:6496;2.55e-98;1!DOID:201;9.07e-18;6!DOID:0060100;9.07e-18;6!DOID:3119;1.86e-08;14 | ||
|ontology_enrichment_disease_v019_2=DOID:3371,2.55e-98,1;DOID:4549,2.55e-98,1;DOID:5861,2.55e-98,1;DOID:6496,2.55e-98,1;DOID:201,9.07e-18,6;DOID:0060100,9.07e-18,6;DOID:3119,1.86e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0002146!2.21e-40!1;UBERON:0005623!2.21e-40!1;UBERON:0000945!7.35e-21!8;UBERON:0010039!7.35e-21!8;UBERON:0002418!1.40e-14!3;UBERON:0004755!1.40e-14!3;UBERON:0003978!1.83e-14!3;UBERON:0009751!1.83e-14!3;UBERON:0000946!1.83e-14!3;UBERON:0002523!1.83e-14!3;UBERON:0005983!1.83e-14!3;UBERON:0002165!1.83e-14!3;UBERON:0002062!1.83e-14!3;UBERON:0007280!1.83e-14!3 | |ontology_enrichment_uberon=UBERON:0002146!2.21e-40!1;UBERON:0005623!2.21e-40!1;UBERON:0000945!7.35e-21!8;UBERON:0010039!7.35e-21!8;UBERON:0002418!1.40e-14!3;UBERON:0004755!1.40e-14!3;UBERON:0003978!1.83e-14!3;UBERON:0009751!1.83e-14!3;UBERON:0000946!1.83e-14!3;UBERON:0002523!1.83e-14!3;UBERON:0005983!1.83e-14!3;UBERON:0002165!1.83e-14!3;UBERON:0002062!1.83e-14!3;UBERON:0007280!1.83e-14!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002418;5.96e-34;3!UBERON:0004755;5.96e-34;3!UBERON:0000945;4.21e-21;5!UBERON:0010039;4.21e-21;5!UBERON:0001041;1.86e-08;14!UBERON:0001474;7.60e-07;18 | |ontology_enrichment_uberon_v019=UBERON:0002418;5.96e-34;3!UBERON:0004755;5.96e-34;3!UBERON:0000945;4.21e-21;5!UBERON:0010039;4.21e-21;5!UBERON:0001041;1.86e-08;14!UBERON:0001474;7.60e-07;18 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002418,5.96e-34,3;UBERON:0004755,5.96e-34,3;UBERON:0000945,9.39e-14,8;UBERON:0010039,9.39e-14,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.47117154736201,0,0,0,0,0,0,0,0,0,4.35239065430479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294450700845729,0,0,0,0,0,0,0,0,0.22589216407792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.47117154736201,0,0,0,0,0,0,0,0,0,4.35239065430479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294450700845729,0,0,0,0,0,0,0,0,0.22589216407792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr13:23404401..23404405,+ | |short_description=p@chr13:23404401..23404405,+ | ||
}} | }} |
Latest revision as of 15:05, 24 July 2015
Short description: | p@chr13:23404401..23404405, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:23404401..23404405, + |
Coexpression cluster: | C112_gastric_pancreas_temporal_duodenum_small_extraskeletal_adrenal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 9.07e-18 | 6 |
chondrocyte | 9.07e-18 | 6 |
GAG secreting cell | 2.45e-12 | 9 |
carbohydrate secreting cell | 2.45e-12 | 9 |
extracellular matrix secreting cell | 5.93e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
cartilage tissue | 5.96e-34 | 3 |
skeletal tissue | 5.96e-34 | 3 |
stomach | 9.39e-14 | 8 |
food storage organ | 9.39e-14 | 8 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 2.55e-98 | 1 |
extraosseous chondrosarcoma | 2.55e-98 | 1 |
myxoid chondrosarcoma | 2.55e-98 | 1 |
extraskeletal myxoid chondrosarcoma | 2.55e-98 | 1 |
connective tissue cancer | 9.07e-18 | 6 |
musculoskeletal system cancer | 9.07e-18 | 6 |
gastrointestinal system cancer | 1.86e-08 | 14 |