FFCP PHASE1:Hg19::chr13:36046521..36046554,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:36046521..36046554,+ | |||
|coexpression_cluster_id=C699 | |coexpression_cluster_id=C699 | ||
|description=CAGE_peak_at_chr13:36046521..36046554,+ | |description=CAGE_peak_at_chr13:36046521..36046554,+ | ||
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|ontology_enrichment_celltype=CL:0000064!7.77e-08!3;CL:0005012!7.77e-08!3;CL:0000067!7.77e-08!3;CL:0002304!7.77e-08!3;CL:0000075!2.71e-07!27;CL:0000710!4.98e-07!20;CL:0002580!5.16e-07!3 | |ontology_enrichment_celltype=CL:0000064!7.77e-08!3;CL:0005012!7.77e-08!3;CL:0000067!7.77e-08!3;CL:0002304!7.77e-08!3;CL:0000075!2.71e-07!27;CL:0000710!4.98e-07!20;CL:0002580!5.16e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000333;6.29e-20;5!CL:0000064;3.58e-15;3!CL:0000067;3.58e-15;3!CL:0005012;3.58e-15;3!CL:0002304;3.58e-15;3!CL:0000228;8.62e-12;1!CL:0002372;8.62e-12;1!CL:0002321;1.28e-11;15!CL:0000075;1.18e-09;27!CL:0000710;1.15e-08;20!CL:0000197;6.83e-08;6!CL:0000098;6.83e-08;6!CL:0002167;6.83e-08;6 | |ontology_enrichment_celltype_v019=CL:0000333;6.29e-20;5!CL:0000064;3.58e-15;3!CL:0000067;3.58e-15;3!CL:0005012;3.58e-15;3!CL:0002304;3.58e-15;3!CL:0000228;8.62e-12;1!CL:0002372;8.62e-12;1!CL:0002321;1.28e-11;15!CL:0000075;1.18e-09;27!CL:0000710;1.15e-08;20!CL:0000197;6.83e-08;6!CL:0000098;6.83e-08;6!CL:0002167;6.83e-08;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000064,3.00e-15,3;CL:0000067,3.00e-15,3;CL:0005012,3.00e-15,3;CL:0002304,3.00e-15,3;CL:0000228,8.64e-12,1;CL:0002372,8.64e-12,1;CL:0000133,3.40e-10,59;CL:0000075,1.17e-09,27;CL:0000710,1.29e-08,20;CL:0000221,3.08e-08,72;CL:0000197,9.01e-08,6;CL:0000098,9.01e-08,6;CL:0002167,9.01e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0006215;7.01e-15;3!UBERON:0003099;8.62e-12;1!UBERON:0003852;8.62e-12;1!CL:0000221;2.26e-07;72 | |ontology_enrichment_development_v019=UBERON:0006215;7.01e-15;3!UBERON:0003099;8.62e-12;1!UBERON:0003852;8.62e-12;1!CL:0000221;2.26e-07;72 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:169;1.03e-16;6!DOID:171;2.96e-10;10!DOID:3095;5.59e-08;22!DOID:2994;5.59e-08;22 | |ontology_enrichment_disease_v019=DOID:169;1.03e-16;6!DOID:171;2.96e-10;10!DOID:3095;5.59e-08;22!DOID:2994;5.59e-08;22 | ||
|ontology_enrichment_disease_v019_2=DOID:169,1.06e-16,6;DOID:171,3.01e-10,10;DOID:3095,4.97e-08,22;DOID:2994,4.97e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0003075!4.00e-19!86;UBERON:0007284!4.00e-19!86;UBERON:0002346!4.30e-19!90;UBERON:0000033!3.39e-15!123;UBERON:0000153!5.24e-15!129;UBERON:0007811!5.24e-15!129;UBERON:0003076!9.33e-15!15;UBERON:0003057!9.33e-15!15;UBERON:0000924!5.63e-13!173;UBERON:0006601!5.63e-13!173;UBERON:0000970!6.72e-13!20;UBERON:0000073!6.91e-13!94;UBERON:0001016!6.91e-13!94;UBERON:0004121!9.06e-13!169;UBERON:0000020!1.10e-12!23;UBERON:0001049!2.88e-12!57;UBERON:0005068!2.88e-12!57;UBERON:0006241!2.88e-12!57;UBERON:0007135!2.88e-12!57;UBERON:0001456!3.36e-12!21;UBERON:0002104!3.87e-12!21;UBERON:0001032!5.14e-12!24;UBERON:0004456!5.14e-12!24;UBERON:0002298!1.47e-11!8;UBERON:0007625!1.57e-11!11;UBERON:0005743!2.02e-11!86;UBERON:0000019!2.34e-11!19;UBERON:0000047!2.34e-11!19;UBERON:0004088!2.34e-11!19;UBERON:0003072!2.34e-11!19;UBERON:0003071!2.34e-11!19;UBERON:0004128!2.34e-11!19;UBERON:0003056!3.09e-11!61;UBERON:0001444!1.12e-10!48;UBERON:0000475!1.44e-10!365;UBERON:0004733!3.78e-10!12;UBERON:0002028!3.78e-10!12;UBERON:0007277!3.78e-10!12;UBERON:0000966!4.49e-10!5;UBERON:0005388!4.49e-10!5;UBERON:0001802!4.49e-10!5;UBERON:0004732!3.03e-09!13;UBERON:0001017!2.28e-08!82;UBERON:0002616!2.74e-08!59;UBERON:0002680!2.81e-08!9;UBERON:0001895!2.81e-08!9;UBERON:0010092!2.81e-08!9;UBERON:0000955!5.00e-08!69;UBERON:0006238!5.00e-08!69;UBERON:0001778!7.77e-08!3;UBERON:0001775!7.77e-08!3;UBERON:0000988!8.25e-07!3;UBERON:0002240!9.50e-07!3 | |ontology_enrichment_uberon=UBERON:0003075!4.00e-19!86;UBERON:0007284!4.00e-19!86;UBERON:0002346!4.30e-19!90;UBERON:0000033!3.39e-15!123;UBERON:0000153!5.24e-15!129;UBERON:0007811!5.24e-15!129;UBERON:0003076!9.33e-15!15;UBERON:0003057!9.33e-15!15;UBERON:0000924!5.63e-13!173;UBERON:0006601!5.63e-13!173;UBERON:0000970!6.72e-13!20;UBERON:0000073!6.91e-13!94;UBERON:0001016!6.91e-13!94;UBERON:0004121!9.06e-13!169;UBERON:0000020!1.10e-12!23;UBERON:0001049!2.88e-12!57;UBERON:0005068!2.88e-12!57;UBERON:0006241!2.88e-12!57;UBERON:0007135!2.88e-12!57;UBERON:0001456!3.36e-12!21;UBERON:0002104!3.87e-12!21;UBERON:0001032!5.14e-12!24;UBERON:0004456!5.14e-12!24;UBERON:0002298!1.47e-11!8;UBERON:0007625!1.57e-11!11;UBERON:0005743!2.02e-11!86;UBERON:0000019!2.34e-11!19;UBERON:0000047!2.34e-11!19;UBERON:0004088!2.34e-11!19;UBERON:0003072!2.34e-11!19;UBERON:0003071!2.34e-11!19;UBERON:0004128!2.34e-11!19;UBERON:0003056!3.09e-11!61;UBERON:0001444!1.12e-10!48;UBERON:0000475!1.44e-10!365;UBERON:0004733!3.78e-10!12;UBERON:0002028!3.78e-10!12;UBERON:0007277!3.78e-10!12;UBERON:0000966!4.49e-10!5;UBERON:0005388!4.49e-10!5;UBERON:0001802!4.49e-10!5;UBERON:0004732!3.03e-09!13;UBERON:0001017!2.28e-08!82;UBERON:0002616!2.74e-08!59;UBERON:0002680!2.81e-08!9;UBERON:0001895!2.81e-08!9;UBERON:0010092!2.81e-08!9;UBERON:0000955!5.00e-08!69;UBERON:0006238!5.00e-08!69;UBERON:0001778!7.77e-08!3;UBERON:0001775!7.77e-08!3;UBERON:0000988!8.25e-07!3;UBERON:0002240!9.50e-07!3 | ||
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|short_description=p@chr13:36046521..36046554,+ | |short_description=p@chr13:36046521..36046554,+ | ||
}} | }} |
Latest revision as of 15:45, 24 July 2015
Short description: | p@chr13:36046521..36046554, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:36046521..36046554, + |
Coexpression cluster: | C699_medulloblastoma_Lens_neuroblastoma_Ciliary_eye_small_cerebellum |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 3.00e-15 | 3 |
ciliated epithelial cell | 3.00e-15 | 3 |
multi-ciliated epithelial cell | 3.00e-15 | 3 |
non-pigmented ciliary epithelial cell | 3.00e-15 | 3 |
multinucleate cell | 8.64e-12 | 1 |
myotube | 8.64e-12 | 1 |
neurectodermal cell | 3.40e-10 | 59 |
columnar/cuboidal epithelial cell | 1.17e-09 | 27 |
neurecto-epithelial cell | 1.29e-08 | 20 |
ectodermal cell | 3.08e-08 | 72 |
receptor cell | 9.01e-08 | 6 |
sensory epithelial cell | 9.01e-08 | 6 |
olfactory epithelial cell | 9.01e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 1.06e-16 | 6 |
neuroectodermal tumor | 3.01e-10 | 10 |
germ cell and embryonal cancer | 4.97e-08 | 22 |
germ cell cancer | 4.97e-08 | 22 |