FFCP PHASE1:Hg19::chr13:42179544..42179550,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:42179544..42179550,- | |||
|coexpression_cluster_id=C235 | |coexpression_cluster_id=C235 | ||
|description=CAGE_peak_at_chr13:42179544..42179550,- | |description=CAGE_peak_at_chr13:42179544..42179550,- | ||
|id=chr13:42179544..42179550,- | |id=chr13:42179544..42179550,- | ||
|ontology_enrichment_celltype=CL:0002231;2.39e-66;3!CL:0002076;2.32e-07;42 | |ontology_enrichment_celltype=CL:0002563!5.14e-50!4;CL:0002253!5.56e-26!2;CL:0002231!6.76e-18!3;CL:0002076!2.75e-11!43;CL:0002251!1.69e-10!21;CL:0000223!1.83e-08!59 | ||
| | |ontology_enrichment_celltype_v019=CL:0002231;2.39e-66;3!CL:0002076;2.32e-07;42 | ||
|ontology_enrichment_celltype_v019_2=CL:0002231,2.39e-66,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0002367;2.25e-19;11!UBERON:0010147;2.25e-19;11!UBERON:0003937;6.76e-18;12!UBERON:0005399;6.76e-18;12!UBERON:0003101;1.80e-10;22!UBERON:0000079;1.80e-10;22!UBERON:0000077;8.32e-09;27 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001242!5.14e-50!4;UBERON:0001262!5.14e-50!4;UBERON:0004786!5.14e-50!4;UBERON:0004808!5.14e-50!4;UBERON:0001277!5.14e-50!4;UBERON:0002146!6.58e-50!1;UBERON:0005623!6.58e-50!1;UBERON:0003350!2.71e-40!5;UBERON:0000485!5.74e-23!9;UBERON:0003978!1.12e-17!3;UBERON:0009751!1.12e-17!3;UBERON:0000946!1.12e-17!3;UBERON:0002523!1.12e-17!3;UBERON:0005983!1.12e-17!3;UBERON:0002165!1.12e-17!3;UBERON:0002062!1.12e-17!3;UBERON:0007280!1.12e-17!3;UBERON:0000344!1.57e-17!12;UBERON:0000060!1.57e-17!12;UBERON:0001052!1.00e-13!4;UBERON:0001046!1.55e-11!19;UBERON:0004907!2.94e-11!5;UBERON:0003929!3.61e-09!54;UBERON:0004923!1.07e-08!57;UBERON:0000160!3.92e-08!27;UBERON:0001155!7.91e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002367;2.25e-19;11!UBERON:0010147;2.25e-19;11!UBERON:0003937;6.76e-18;12!UBERON:0005399;6.76e-18;12!UBERON:0003101;1.80e-10;22!UBERON:0000079;1.80e-10;22!UBERON:0000077;8.32e-09;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002367,2.25e-19,11;UBERON:0010147,2.25e-19,11;UBERON:0009846,2.25e-19,11;UBERON:0003353,2.25e-19,11;UBERON:0004902,2.25e-19,11;UBERON:0003820,2.25e-19,11;UBERON:0009847,2.25e-19,11;UBERON:0003937,6.76e-18,12;UBERON:0005399,6.76e-18,12;UBERON:0000162,1.43e-15,14;UBERON:0001353,1.43e-15,14;UBERON:0000163,1.43e-15,14;UBERON:0006866,1.43e-15,14;UBERON:0000164,1.43e-15,14;UBERON:0000931,1.43e-15,14;UBERON:0004122,1.22e-14,15;UBERON:0001046,6.95e-12,19;UBERON:0003101,1.80e-10,22;UBERON:0000079,1.80e-10,22;UBERON:0003064,1.52e-08,28;UBERON:0000077,2.67e-08,29;UBERON:0000161,5.81e-07,36;UBERON:0005153,8.21e-07,37 | |||
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|short_description=p@chr13:42179544..42179550,- | |short_description=p@chr13:42179544..42179550,- | ||
}} | }} |
Latest revision as of 16:03, 24 July 2015
Short description: | p@chr13:42179544..42179550, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:42179544..42179550, - |
Coexpression cluster: | C235_Intestinal_Prostate_liver_colon_small_kidney_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of prostate | 2.39e-66 | 3 |
Ontology term | p-value | n |
---|---|---|
prostate gland | 2.25e-19 | 11 |
male accessory sex gland | 2.25e-19 | 11 |
embryonic cloacal epithelium | 2.25e-19 | 11 |
epithelium of hindgut | 2.25e-19 | 11 |
urogenital sinus epithelium | 2.25e-19 | 11 |
prostate bud | 2.25e-19 | 11 |
prostate field | 2.25e-19 | 11 |
sex gland | 6.76e-18 | 12 |
male reproductive gland | 6.76e-18 | 12 |
cloaca | 1.43e-15 | 14 |
anal region | 1.43e-15 | 14 |
embryonic cloaca | 1.43e-15 | 14 |
terminal part of digestive tract | 1.43e-15 | 14 |
primitive urogenital sinus | 1.43e-15 | 14 |
proctodeum | 1.43e-15 | 14 |
genitourinary system | 1.22e-14 | 15 |
hindgut | 6.95e-12 | 19 |
male organism | 1.80e-10 | 22 |
male reproductive system | 1.80e-10 | 22 |
intermediate mesoderm | 1.52e-08 | 28 |
mixed endoderm/mesoderm-derived structure | 2.67e-08 | 29 |
orifice | 5.81e-07 | 36 |
epithelial bud | 8.21e-07 | 37 |