FFCP PHASE1:Hg19::chr13:43059605..43059611,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr13:43059605..43059611,+ | |||
|coexpression_cluster_id=C458 | |||
|description=CAGE_peak_at_chr13:43059605..43059611,+ | |||
|id=chr13:43059605..43059611,+ | |||
|ontology_enrichment_celltype=CL:0002076!4.79e-26!43;CL:0002251!6.23e-21!21;CL:0000223!9.54e-18!59;CL:0002623!1.53e-13!3;CL:0000066!2.85e-13!254;CL:0002564!2.29e-12!3;CL:0002368!8.43e-11!13;CL:0002549!3.29e-09!2;CL:0000622!2.84e-08!5;CL:0000076!1.20e-07!62;CL:0000154!6.01e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002623;6.26e-67;3!CL:0000622;1.49e-40;5!CL:0000154;6.00e-34;6!CL:0002251;9.93e-28;20!CL:0002336;4.10e-23;1!CL:0002261;4.10e-23;1!CL:0002170;4.10e-23;1!CL:0000150;6.45e-23;9!CL:0002076;8.03e-22;42!CL:0002549;2.90e-12;2!CL:0000322;1.30e-08;3!CL:0002368;9.51e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,5.01e-67,3;CL:0000622,1.30e-40,5;CL:0000154,5.37e-34,6;CL:0002251,9.40e-28,20;CL:0002076,1.44e-25,42;CL:0000150,5.99e-23,9;CL:0002336,6.40e-23,1;CL:0002261,6.40e-23,1;CL:0002170,6.40e-23,1;CL:0000223,1.62e-18,58;CL:0002549,2.59e-12,2;CL:0000322,1.40e-08,3;CL:0002368,1.02e-07,13 | |||
|ontology_enrichment_development_v019=CL:0000223;7.68e-09;58 | |||
|ontology_enrichment_disease=DOID:1749!1.26e-25!14 | |||
|ontology_enrichment_disease_v019=DOID:3910;2.90e-12;2!DOID:1749;3.34e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,3.24e-12,2;DOID:1749,3.14e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0003729!8.98e-20!5;UBERON:0003343!5.68e-16!4;UBERON:0004785!5.68e-16!4;UBERON:0000166!6.43e-14!21;UBERON:0000165!1.88e-12!28;UBERON:0000930!1.88e-12!28;UBERON:0002242!2.29e-12!3;UBERON:0003068!2.29e-12!3;UBERON:0002328!2.29e-12!3;UBERON:0004880!2.29e-12!3;UBERON:0000161!1.93e-11!35;UBERON:0000344!4.25e-11!12;UBERON:0001444!4.95e-11!48;UBERON:0003947!3.29e-09!2;UBERON:0005629!3.29e-09!2;UBERON:0005358!3.29e-09!2;UBERON:0001886!3.29e-09!2;UBERON:0004086!3.29e-09!2;UBERON:0005282!3.29e-09!2;UBERON:0005281!3.29e-09!2;UBERON:0001004!4.21e-09!72;UBERON:0002200!1.21e-08!11;UBERON:0006876!1.21e-08!11;UBERON:0005284!8.54e-08!5;UBERON:0001044!6.01e-07!6;UBERON:0003293!6.01e-07!6;UBERON:0003294!6.01e-07!6;UBERON:0010047!6.01e-07!6;UBERON:0000167!6.01e-07!6;UBERON:0000033!9.38e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;6.00e-34;6!UBERON:0003293;6.00e-34;6!UBERON:0003294;6.00e-34;6!UBERON:0010047;6.00e-34;6!UBERON:0003408;6.00e-34;6!UBERON:0000167;6.00e-34;6!UBERON:0000165;6.68e-20;28!UBERON:0000161;4.60e-19;19!UBERON:0000166;4.60e-19;19!UBERON:0001041;5.26e-15;14!UBERON:0004903;2.90e-12;2!UBERON:0005629;2.90e-12;2!UBERON:0005358;2.90e-12;2!UBERON:0001886;2.90e-12;2!UBERON:0004086;2.90e-12;2!UBERON:0005282;2.90e-12;2!UBERON:0002173;2.90e-12;2!UBERON:0002186;2.90e-12;2!UBERON:0005281;2.90e-12;2!UBERON:0007811;3.95e-09;52!UBERON:0004821;1.30e-08;3!UBERON:0007499;1.30e-08;3!UBERON:0003215;1.30e-08;3!UBERON:0010368;1.30e-08;3!UBERON:0009911;1.30e-08;3!UBERON:0002299;1.30e-08;3!UBERON:0006524;1.30e-08;3!UBERON:0008874;1.30e-08;3!UBERON:0002169;1.30e-08;3!UBERON:0004894;1.30e-08;3!UBERON:0003729;1.09e-07;13!UBERON:0000033;1.17e-07;50!UBERON:0001004;1.76e-07;65!UBERON:0002365;2.44e-07;31!UBERON:0002330;2.44e-07;31!UBERON:0000153;3.16e-07;54!UBERON:0001444;5.92e-07;48!UBERON:0003343;9.10e-07;4!UBERON:0004785;9.10e-07;4!UBERON:0009856;9.10e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,5.37e-34,6;UBERON:0003293,5.37e-34,6;UBERON:0003294,5.37e-34,6;UBERON:0010047,5.37e-34,6;UBERON:0000167,5.37e-34,6;UBERON:0003408,9.82e-21,10;UBERON:0000165,3.05e-19,29;UBERON:0000930,3.05e-19,29;UBERON:0000166,1.39e-16,22;UBERON:0005629,2.59e-12,2;UBERON:0005358,2.59e-12,2;UBERON:0001886,2.59e-12,2;UBERON:0004086,2.59e-12,2;UBERON:0005282,2.59e-12,2;UBERON:0005281,2.59e-12,2;UBERON:0004903,3.24e-12,2;UBERON:0002173,3.24e-12,2;UBERON:0002186,3.24e-12,2;UBERON:0001444,1.76e-11,49;UBERON:0001004,8.72e-11,74;UBERON:0000161,2.68e-10,36;UBERON:0000033,4.57e-10,56;UBERON:0000153,4.18e-09,62;UBERON:0007811,4.18e-09,62;UBERON:0004821,1.40e-08,3;UBERON:0003215,1.40e-08,3;UBERON:0010368,1.40e-08,3;UBERON:0009911,1.40e-08,3;UBERON:0002299,1.40e-08,3;UBERON:0006524,1.40e-08,3;UBERON:0008874,1.40e-08,3;UBERON:0002169,1.40e-08,3;UBERON:0004894,1.40e-08,3;UBERON:0003729,1.09e-07,13;UBERON:0002365,3.95e-07,31;UBERON:0002330,3.95e-07,31;UBERON:0003343,8.14e-07,4;UBERON:0004785,8.14e-07,4 | |||
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| ||
|short_description=p@chr13:43059605..43059611,+ | |||
}} | }} |
Latest revision as of 16:06, 24 July 2015
Short description: | p@chr13:43059605..43059611, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:43059605..43059611, + |
Coexpression cluster: | C458_salivary_parietal_middle_locus_medial_occipital_globus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 5.01e-67 | 3 |
acinar cell | 1.30e-40 | 5 |
protein secreting cell | 5.37e-34 | 6 |
epithelial cell of alimentary canal | 9.40e-28 | 20 |
endo-epithelial cell | 1.44e-25 | 42 |
glandular epithelial cell | 5.99e-23 | 9 |
buccal mucosa cell | 6.40e-23 | 1 |
endothelial cell of viscerocranial mucosa | 6.40e-23 | 1 |
keratinized cell of the oral mucosa | 6.40e-23 | 1 |
endodermal cell | 1.62e-18 | 58 |
fibroblast of choroid plexus | 2.59e-12 | 2 |
pneumocyte | 1.40e-08 | 3 |
respiratory epithelial cell | 1.02e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 3.24e-12 | 2 |
squamous cell carcinoma | 3.14e-07 | 14 |