FFCP PHASE1:Hg19::chr13:46960645..46960658,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:46960645..46960658,- | |||
|coexpression_cluster_id=C498 | |||
|description=CAGE_peak_at_chr13:46960645..46960658,- | |description=CAGE_peak_at_chr13:46960645..46960658,- | ||
|id=chr13:46960645..46960658,- | |id=chr13:46960645..46960658,- | ||
|ontology_enrichment_celltype=CL:0000945!1.22e-34!24;CL:0000826!1.22e-34!24;CL:0000236!5.88e-26!14;CL:0000542!7.67e-16!53;CL:0000051!7.67e-16!53;CL:0000738!2.40e-15!140;CL:0000838!1.65e-14!52;CL:0002087!1.54e-11!119;CL:0000037!1.77e-11!172;CL:0000566!1.77e-11!172;CL:0000988!2.63e-10!182;CL:0002032!2.12e-08!165;CL:0000837!2.12e-08!165;CL:0002031!3.63e-08!124;CL:0000842!1.34e-07!3 | |ontology_enrichment_celltype=CL:0000945!1.22e-34!24;CL:0000826!1.22e-34!24;CL:0000236!5.88e-26!14;CL:0000542!7.67e-16!53;CL:0000051!7.67e-16!53;CL:0000738!2.40e-15!140;CL:0000838!1.65e-14!52;CL:0002087!1.54e-11!119;CL:0000037!1.77e-11!172;CL:0000566!1.77e-11!172;CL:0000988!2.63e-10!182;CL:0002032!2.12e-08!165;CL:0000837!2.12e-08!165;CL:0002031!3.63e-08!124;CL:0000842!1.34e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000236;2.42e-91;13!CL:0000945;3.78e-76;24!CL:0000542;1.31e-28;53!CL:0000771;5.75e-18;2!CL:0000094;4.85e-17;8!CL:0000081;1.88e-12;11!CL:0000775;4.46e-12;3!CL:0000785;4.46e-10;1!CL:0000819;4.46e-10;1!CL:0000738;4.37e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.13e-84,14;CL:0000945,3.78e-76,24;CL:0000826,3.78e-76,24;CL:0000542,9.07e-38,53;CL:0000051,9.07e-38,53;CL:0000838,8.36e-34,52;CL:0000738,1.32e-23,136;CL:0000037,1.72e-18,168;CL:0000771,5.28e-18,2;CL:0002032,1.90e-17,161;CL:0000837,1.90e-17,161;CL:0000988,2.21e-17,177;CL:0000094,4.85e-17,8;CL:0002087,9.48e-16,115;CL:0002031,4.96e-13,120;CL:0000081,1.88e-12,11;CL:0000775,4.72e-12,3;CL:0000819,4.46e-10,1;CL:0000134,6.27e-07,354 | |||
|ontology_enrichment_development_v019=CL:0000051;1.31e-28;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060058;1.03e-13;10!DOID:0060073;4.46e-10;1!DOID:8675;4.46e-10;1!DOID:12603;1.76e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,1.01e-13,10;DOID:0060073,4.46e-10,1;DOID:8675,4.46e-10,1;DOID:12603,1.76e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.85e-11!115;UBERON:0000178!6.06e-07!15;UBERON:0000179!6.06e-07!15;UBERON:0000463!6.06e-07!15 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.236132343941038,0,0,0,0,0,0,7.28191685454835,2.98555388223585,0,0,0,0,0,0,0,0,0,0.242584061187816,0.232429036905685,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0.736555271975129,0,0,0,0,0,0,0,0,0,0,12.3197371122926,4.91524750135918,8.00558328477199,4.69403244823158,9.6095036888643,9.19603903927173,4.62731410949403,7.63243003628291,3.41527781465669,6.45960908308033,3.05818582500183,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.953962497221368,0,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,11.6334079244498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,2.24702107184155,0,7.45947924184864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0.507447609232169,1.52927441428475,0,0.238231775457789,0.822724546172388,0,0,0,0,0,0,2.9728508020115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591095237907095,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.134802265961354,0,0,10.94728735294,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0.121499113316049,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,4.74991133685494,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0.378806010550178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471797825567689,0,0.848662649770126,0,0,0,0,0,0,0,0,0,1.41696576325585,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0,0.342976018874837,0,0.0657727735628491,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0.594092800654172,0,0,0.281951753939561,1.16024198352439,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0.380095503034311,0,0,0,0,0,0,0,0.20686599172379,0,0.23806443146374,0.452122368852043,0.682821857254437,0,0,0,0,0,0.606168477131288,0,0,0,0,0,0,0,0,0,0,0.402547587182052,0.320568492303233 | ||
|short_description=p@chr13:46960645..46960658,- | |short_description=p@chr13:46960645..46960658,- | ||
}} | }} |
Latest revision as of 16:24, 24 July 2015
Short description: | p@chr13:46960645..46960658, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:46960645..46960658, - |
Coexpression cluster: | C498_Eosinophils_Neutrophils_CD19_Burkitt_diffuse_lymphoma_CD14 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 1.13e-84 | 14 |
lymphocyte of B lineage | 3.78e-76 | 24 |
pro-B cell | 3.78e-76 | 24 |
lymphocyte | 9.07e-38 | 53 |
common lymphoid progenitor | 9.07e-38 | 53 |
lymphoid lineage restricted progenitor cell | 8.36e-34 | 52 |
leukocyte | 1.32e-23 | 136 |
hematopoietic stem cell | 1.72e-18 | 168 |
eosinophil | 5.28e-18 | 2 |
hematopoietic oligopotent progenitor cell | 1.90e-17 | 161 |
hematopoietic multipotent progenitor cell | 1.90e-17 | 161 |
hematopoietic cell | 2.21e-17 | 177 |
granulocyte | 4.85e-17 | 8 |
nongranular leukocyte | 9.48e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 4.96e-13 | 120 |
blood cell | 1.88e-12 | 11 |
neutrophil | 4.72e-12 | 3 |
B-1 B cell | 4.46e-10 | 1 |
mesenchymal cell | 6.27e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 1.01e-13 | 10 |
lymphatic system cancer | 4.46e-10 | 1 |
lymphosarcoma | 4.46e-10 | 1 |
acute leukemia | 1.76e-09 | 1 |