FFCP PHASE1:Hg19::chr13:97500658..97500682,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:97500658..97500682,- | |||
|coexpression_cluster_id=C184 | |coexpression_cluster_id=C184 | ||
|description=CAGE_peak_at_chr13:97500658..97500682,- | |description=CAGE_peak_at_chr13:97500658..97500682,- | ||
|id=chr13:97500658..97500682,- | |id=chr13:97500658..97500682,- | ||
|ontology_enrichment_celltype=CL:0002322!4.70e-23!5;CL:0000167!3.08e-14!1;CL:0000164!3.08e-14!1;CL:0000502!3.08e-14!1;CL:0000172!3.08e-14!1;CL:0000173!3.08e-14!1;CL:0002351!3.08e-14!1;CL:0000148!7.54e-12!10;CL:0000541!7.54e-12!10;CL:0000147!1.28e-08!14;CL:0002535!1.20e-07!2 | |ontology_enrichment_celltype=CL:0002322!4.70e-23!5;CL:0000167!3.08e-14!1;CL:0000164!3.08e-14!1;CL:0000502!3.08e-14!1;CL:0000172!3.08e-14!1;CL:0000173!3.08e-14!1;CL:0002351!3.08e-14!1;CL:0000148!7.54e-12!10;CL:0000541!7.54e-12!10;CL:0000147!1.28e-08!14;CL:0002535!1.20e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000167;1.84e-34;1!CL:0000164;1.84e-34;1!CL:0000502;1.84e-34;1!CL:0000172;1.84e-34;1!CL:0000173;1.84e-34;1!CL:0002535;1.17e-17;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,1.84e-34,1;CL:0000164,1.84e-34,1;CL:0000502,1.84e-34,1;CL:0000172,1.84e-34,1;CL:0000173,1.84e-34,1;CL:0002351,1.84e-34,1;CL:0002535,1.07e-17,2 | |||
|ontology_enrichment_development_v019=CL:0002351;1.84e-34;1 | |||
|ontology_enrichment_disease=DOID:4430!3.08e-14!1 | |ontology_enrichment_disease=DOID:4430!3.08e-14!1 | ||
|ontology_enrichment_disease_v019=DOID:4430;1.84e-34;1!DOID:4362;7.25e-08;5!DOID:169;7.17e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,1.84e-34,1;DOID:4362,7.01e-08,5;DOID:169,7.17e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0002146!1.61e-13!1;UBERON:0005623!1.61e-13!1;UBERON:0005409!1.24e-08!35;UBERON:0002108!4.32e-08!14;UBERON:0006955!1.20e-07!2;UBERON:0004801!1.20e-07!2;UBERON:0000160!2.30e-07!27 | |ontology_enrichment_uberon=UBERON:0002146!1.61e-13!1;UBERON:0005623!1.61e-13!1;UBERON:0005409!1.24e-08!35;UBERON:0002108!4.32e-08!14;UBERON:0006955!1.20e-07!2;UBERON:0004801!1.20e-07!2;UBERON:0000160!2.30e-07!27 | ||
|ontology_enrichment_uberon_v019=UBERON:0002108;2.91e-27;4!UBERON:0006955;1.17e-17;2!UBERON:0004801;1.17e-17;2!UBERON:0005409;1.17e-13;22!UBERON:0002114;2.07e-12;2!UBERON:0000160;2.47e-08;17!UBERON:0004921;5.33e-08;33!UBERON:0000945;6.55e-08;5!UBERON:0010039;6.55e-08;5!UBERON:0000002;9.23e-07;6!UBERON:0001560;9.23e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,3.11e-27,4;UBERON:0006955,1.07e-17,2;UBERON:0004801,1.07e-17,2;UBERON:0002114,2.07e-12,2;UBERON:0005409,3.64e-12,25;UBERON:0000160,2.51e-08,17;UBERON:0000002,8.97e-07,6;UBERON:0001560,8.97e-07,6 | |||
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|short_description=p@chr13:97500658..97500682,- | |short_description=p@chr13:97500658..97500682,- | ||
}} | }} |
Latest revision as of 17:35, 24 July 2015
Short description: | p@chr13:97500658..97500682, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:97500658..97500682, - |
Coexpression cluster: | C184_somatostatinoma_smallcell_nonsmall_small_gastrointestinal_pineal_thyroid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 1.84e-34 | 1 |
enteroendocrine cell | 1.84e-34 | 1 |
type D enteroendocrine cell | 1.84e-34 | 1 |
somatostatin secreting cell | 1.84e-34 | 1 |
pancreatic D cell | 1.84e-34 | 1 |
progenitor cell of endocrine pancreas | 1.84e-34 | 1 |
epithelial cell of cervix | 1.07e-17 | 2 |
Ontology term | p-value | n |
---|---|---|
small intestine | 3.11e-27 | 4 |
uterine epithelium | 1.07e-17 | 2 |
cervix epithelium | 1.07e-17 | 2 |
duodenum | 2.07e-12 | 2 |
gastrointestinal system | 3.64e-12 | 25 |
intestine | 2.51e-08 | 17 |
uterine cervix | 8.97e-07 | 6 |
neck of organ | 8.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 1.84e-34 | 1 |
cervical cancer | 7.01e-08 | 5 |
neuroendocrine tumor | 7.17e-07 | 6 |