FFCP PHASE1:Hg19::chr14:101034622..101034645,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=57596 | |EntrezGene=entrezgene:57596 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=24163 | |HGNC=HGNC:24163 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=G3V2K4,Q9BUH8 | |UniProt=uniprot:G3V2K4,uniprot:Q9BUH8 | ||
|association_with_transcript=-215bp_to_ENST00000443071,ENST00000557378,NM_001159531,uc010txa.1_5end | |association_with_transcript=-215bp_to_ENST00000443071,ENST00000557378,NM_001159531,uc010txa.1_5end | ||
|cluster_id=chr14:101034622..101034645,- | |||
|description=CAGE_peak_5_at_BEGAIN_5end | |description=CAGE_peak_5_at_BEGAIN_5end | ||
|id=chr14:101034622..101034645,- | |id=chr14:101034622..101034645,- | ||
Revision as of 17:55, 24 July 2015
| Short description: | p5@BEGAIN |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_5_at_BEGAIN_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -215bp_to_ENST00000443071, ENST00000557378, NM_001159531, uc010txa.1_5end |
| EntrezGene: | 57596 |
| HGNC: | 24163 |
| UniProt: | G3V2K4Q9BUH8 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p5@BEGAIN |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| mast cell | 5.17e-12 | 5 |
| basophil mast progenitor cell | 5.17e-12 | 5 |
| endocrine cell | 7.24e-07 | 9 |
Showing 1 to 3 of 3 entries
| Ontology term | p-value | n |
|---|---|---|
| larynx | 1.90e-54 | 9 |
| upper respiratory tract | 4.81e-25 | 19 |
| respiratory primordium | 9.90e-18 | 38 |
| endoderm of foregut | 9.90e-18 | 38 |
| segment of respiratory tract | 6.11e-14 | 47 |
| pituitary gland | 5.20e-13 | 2 |
| respiratory tract | 7.22e-12 | 54 |
| regional part of metencephalon | 6.40e-11 | 9 |
| metencephalon | 6.40e-11 | 9 |
| future metencephalon | 6.40e-11 | 9 |
Showing 1 to 10 of 31 entries
| Ontology term | p-value | n |
|---|---|---|
| carcinoma | 4.62e-10 | 106 |
| cell type cancer | 9.66e-08 | 143 |
Showing 1 to 2 of 2 entries
