FFCP PHASE1:Hg19::chr14:106453005..106453010,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-26bp_to_HM995871_5end | |association_with_transcript=-26bp_to_HM995871_5end | ||
|cluster_id=chr14:106453005..106453010,- | |||
|coexpression_cluster_id=C169 | |||
|description=CAGE_peak_1_at_HM995871_5end | |description=CAGE_peak_1_at_HM995871_5end | ||
|id=chr14:106453005..106453010,- | |id=chr14:106453005..106453010,- | ||
|ontology_enrichment_celltype=CL:0000037!1.63e-11!172;CL:0000566!1.63e-11!172;CL:0000988!2.17e-10!182;CL:0000784!4.97e-10!3;CL:0000767!5.85e-09!3;CL:0002032!5.07e-08!165;CL:0000837!5.07e-08!165;CL:0000084!1.47e-07!25;CL:0000827!1.47e-07!25 | |ontology_enrichment_celltype=CL:0000037!1.63e-11!172;CL:0000566!1.63e-11!172;CL:0000988!2.17e-10!182;CL:0000784!4.97e-10!3;CL:0000767!5.85e-09!3;CL:0002032!5.07e-08!165;CL:0000837!5.07e-08!165;CL:0000084!1.47e-07!25;CL:0000827!1.47e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000784;6.01e-55;3!CL:0002032;3.56e-19;1!CL:0002127;3.56e-19;1!CL:0000817;3.56e-19;1!CL:0000911;3.56e-19;1!CL:0000557;3.56e-19;1!CL:0000814;3.56e-19;1!CL:0000451;1.45e-15;10!CL:0000084;7.47e-12;25!CL:0000542;1.39e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,6.02e-55,3;CL:0002127,5.62e-19,1;CL:0000914,5.62e-19,1;CL:0000911,5.62e-19,1;CL:0000814,5.62e-19,1;CL:0002042,5.62e-19,1;CL:0002039,5.62e-19,1;CL:0002040,5.62e-19,1;CL:0002041,5.62e-19,1;CL:0000451,1.45e-15,10;CL:0000838,2.46e-12,52;CL:0000542,4.22e-12,53;CL:0000051,4.22e-12,53;CL:0000084,8.49e-12,25;CL:0000827,8.49e-12,25;CL:0000893,3.58e-10,2;CL:0002489,3.58e-10,2;CL:0000809,3.58e-10,2;CL:0000808,3.58e-10,2;CL:0000894,3.58e-10,2;CL:0000806,3.58e-10,2;CL:0000807,3.58e-10,2;CL:0000805,3.58e-10,2;CL:0002425,3.58e-10,2;CL:0000738,4.14e-10,136;CL:0000037,4.90e-10,168;CL:0000988,1.72e-09,177;CL:0000817,2.47e-07,3;CL:0002087,2.83e-07,115;CL:0002031,5.90e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002425;2.85e-10;2!CL:0000051;1.39e-08;53 | |||
|ontology_enrichment_disease=DOID:2531!3.82e-23!51;DOID:0060083!3.82e-23!51;DOID:162!6.38e-20!235;DOID:0050686!1.00e-19!137;DOID:14566!3.15e-19!239;DOID:1240!1.24e-16!39;DOID:0060058!1.47e-09!10;DOID:1036!6.34e-09!8;DOID:0050687!8.35e-08!143;DOID:305!2.59e-07!106;DOID:8692!4.95e-07!31 | |ontology_enrichment_disease=DOID:2531!3.82e-23!51;DOID:0060083!3.82e-23!51;DOID:162!6.38e-20!235;DOID:0050686!1.00e-19!137;DOID:14566!3.15e-19!239;DOID:1240!1.24e-16!39;DOID:0060058!1.47e-09!10;DOID:1036!6.34e-09!8;DOID:0050687!8.35e-08!143;DOID:305!2.59e-07!106;DOID:8692!4.95e-07!31 | ||
|ontology_enrichment_disease_v019=DOID:2355;8.94e-20;1!DOID:74;1.43e-10;2!DOID:0060058;3.20e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,8.95e-20,1;DOID:74,1.43e-10,2;DOID:2531,6.27e-09,51;DOID:0060083,6.27e-09,51;DOID:0060058,3.37e-08,10 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.383829398097213,0.309632246632152,0,0,0,0,0,0.880801318004542,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24930726552346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,2.14641561874808,4.57595928624102,7.4291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00876629594175,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,1.87549976869378,0.213425530045242,0.637705090915289,0.199579371432817,0,0,0,0,0.912938716132769,0,0,0,0.321176150207399,0,0.851692475380653,0,0,0,0,0,0,0,0,0.99921590399346,0,0,0,0.242721043499027,0.222886768554957,0.284136146806413,0,0,0,0,0,0,1.15362711958732,0,0,0,0.503865495708552,0,0,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0.796554137998498,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,5.10966490978682,0.470940769185074,0.166211681900156,0,0,0,0.37950746544837,0.476809736941136,0,0.163232808159148,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0,0.347119476670262,0,0.0870592065804026,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0.114536596165916,0,0,0.124252535565433,0.235694034616795,0.135904206073614,0,0,0,0,0,1.27746588066972,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,11.9389398212756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985110248992068,0,0.113312091520126,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0.577628330751691,0.381382095467167,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0.955538938977433,0,0,0,0,0,0,0,0,0.596852325484105,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,1.41157948686277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0.560659312903067,0,0,0,0,0,0,0,0.162806537221949,0,0,0.179650404213174,0,0,0,0,0,0 | ||
|short_description=p1@HM995871 | |short_description=p1@HM995871 | ||
}} | }} |
Latest revision as of 18:43, 24 July 2015
Short description: | p1@HM995871 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HM995871_5end |
Coexpression cluster: | C169_hereditary_adult_gall_lymphangiectasia_chronic_b_choriocarcinoma |
Association with transcript: | -26bp_to_HM995871_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 6.02e-55 | 3 |
innate effector T cell | 5.62e-19 | 1 |
immature NK T cell | 5.62e-19 | 1 |
effector T cell | 5.62e-19 | 1 |
mature NK T cell | 5.62e-19 | 1 |
immature NK T cell stage IV | 5.62e-19 | 1 |
immature NK T cell stage I | 5.62e-19 | 1 |
immature NK T cell stage II | 5.62e-19 | 1 |
immature NK T cell stage III | 5.62e-19 | 1 |
dendritic cell | 1.45e-15 | 10 |
lymphoid lineage restricted progenitor cell | 2.46e-12 | 52 |
lymphocyte | 4.22e-12 | 53 |
common lymphoid progenitor | 4.22e-12 | 53 |
T cell | 8.49e-12 | 25 |
pro-T cell | 8.49e-12 | 25 |
thymocyte | 3.58e-10 | 2 |
double negative thymocyte | 3.58e-10 | 2 |
double-positive, alpha-beta thymocyte | 3.58e-10 | 2 |
DN4 thymocyte | 3.58e-10 | 2 |
DN1 thymic pro-T cell | 3.58e-10 | 2 |
DN2 thymocyte | 3.58e-10 | 2 |
DN3 thymocyte | 3.58e-10 | 2 |
immature single positive thymocyte | 3.58e-10 | 2 |
early T lineage precursor | 3.58e-10 | 2 |
leukocyte | 4.14e-10 | 136 |
hematopoietic stem cell | 4.90e-10 | 168 |
hematopoietic cell | 1.72e-09 | 177 |
precursor B cell | 2.47e-07 | 3 |
nongranular leukocyte | 2.83e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 5.90e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
anemia | 8.95e-20 | 1 |
hematopoietic system disease | 1.43e-10 | 2 |
hematologic cancer | 6.27e-09 | 51 |
immune system cancer | 6.27e-09 | 51 |
lymphoma | 3.37e-08 | 10 |