FFCP PHASE1:Hg19::chr14:55184619..55184621,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:55184619..55184621,+ | |||
|description=CAGE_peak_at_chr14:55184619..55184621,+ | |description=CAGE_peak_at_chr14:55184619..55184621,+ | ||
|id=chr14:55184619..55184621,+ | |id=chr14:55184619..55184621,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000054;3.69e-07;2!CL:0000137;3.69e-07;2!CL:0000092;3.69e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000054,3.48e-07,2;CL:0000137,3.48e-07,2;CL:0000092,3.48e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0005062;1.16e-12;4!UBERON:0007284;1.16e-12;4!UBERON:0006965;3.69e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:200;3.69e-07;2!DOID:4305;3.69e-07;2!DOID:3307;3.69e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,2.43e-07,2;DOID:200,3.48e-07,2;DOID:4305,3.48e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.13e-08!115;UBERON:0001049!4.16e-07!57;UBERON:0005068!4.16e-07!57;UBERON:0006241!4.16e-07!57;UBERON:0007135!4.16e-07!57;UBERON:0002346!5.25e-07!90;UBERON:0003075!6.82e-07!86;UBERON:0007284!6.82e-07!86;UBERON:0002020!8.74e-07!34;UBERON:0003528!8.74e-07!34 | |ontology_enrichment_uberon=UBERON:0007023!2.13e-08!115;UBERON:0001049!4.16e-07!57;UBERON:0005068!4.16e-07!57;UBERON:0006241!4.16e-07!57;UBERON:0007135!4.16e-07!57;UBERON:0002346!5.25e-07!90;UBERON:0003075!6.82e-07!86;UBERON:0007284!6.82e-07!86;UBERON:0002020!8.74e-07!34;UBERON:0003528!8.74e-07!34 | ||
|ontology_enrichment_uberon_v019=UBERON:0002133;2.62e-24;2!UBERON:0003978;1.48e-16;3!UBERON:0000946;1.48e-16;3!UBERON:0002135;4.76e-13;1!UBERON:0002134;4.76e-13;1!UBERON:0005208;4.76e-13;1!UBERON:0004145;4.76e-13;1!UBERON:0005946;4.76e-13;1!UBERON:0005965;4.76e-13;1!UBERON:0002078;4.76e-13;1!UBERON:0002298;6.90e-09;6!UBERON:0003127;3.69e-07;2!UBERON:0001897;3.69e-07;2!UBERON:0002148;3.69e-07;2!UBERON:0002081;3.69e-07;2!UBERON:0006331;3.69e-07;2!UBERON:0009662;3.69e-07;2!UBERON:0010225;3.69e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002133,4.76e-24,2;UBERON:0003978,2.20e-16,3;UBERON:0009751,2.20e-16,3;UBERON:0000946,2.20e-16,3;UBERON:0002523,2.20e-16,3;UBERON:0005983,2.20e-16,3;UBERON:0002165,2.20e-16,3;UBERON:0002062,2.20e-16,3;UBERON:0007280,2.20e-16,3;UBERON:0002134,4.77e-13,1;UBERON:0005208,4.77e-13,1;UBERON:0005946,4.77e-13,1;UBERON:0005965,4.77e-13,1;UBERON:0002078,4.77e-13,1;UBERON:0002135,8.64e-13,1;UBERON:0002298,6.02e-09,6;UBERON:0003076,1.12e-07,15;UBERON:0003057,1.12e-07,15;UBERON:0004797,1.52e-07,7;UBERON:0002148,3.09e-07,2;UBERON:0006331,3.09e-07,2;UBERON:0009662,3.09e-07,2;UBERON:0001897,3.28e-07,2;UBERON:0010225,3.28e-07,2;UBERON:0002081,3.70e-07,2;UBERON:0010227,3.70e-07,2;UBERON:0003127,3.93e-07,2 | |||
|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.273748850145768,0.87879847716362,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0.447830948479849,0,0,0,0,0,0,0,0,0,0.768482119587302,0,0,0,0,0,0,0.224723484445085,0,0,0,0.329851300186716,0.199463657621632,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473447805734733,0,0,0.294605907474837,0.221533894583621,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,1.03988298880475,0.443458794925128,0.702678285545008,0.130979075497713,0,0,0,0.174129737299267,0.26591592103773,0,0,0,0.198762407366705,0,0,0,0,0,0.208994966536811,0.516833518338658,0,0.33472061276467,0,0,0.24406205754817,0,0,0.0892997282840798,0.22452937262617,0,0,0,0,0,0,0,0,0,0.397227542439656,0.286836620748814,0,0,0,0,0,0.134710672069688,0,0,0,0.234321431833797,0,0,0.149448680551801,0.23486899728753,0,0,0,0.368502951935304,0,0,0.494533858557114,0,0,0,0.250237039743928,0,0,0.612975591598039,0.150238058906597,0,0.538168907066586,0,0.211931901159562,0.900273288253207,0.103052529238439,0,0,0.337552664482532,0.292311015483596,0,0,0.161646056818812,0.355009592516614,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0.122988438543114,0.343135620597051,0,0,0,0,0,0,0,0.115930404975077,0,0,0.462985512576611,0,0,0,0.492434012174795,0.234004265139238,0,0,0,0,0.0895585227028483,0,0,0,0,0.207328115540772,0.288239906833923,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.434343920002738,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0.207970861530807,0.535286966391485,0.157702415033935,0,0,0,0,0,0.184369168541703,0.260650843404249,0,0,0,0,0,0,0,0,0.248107807818777,0.306923946576125,0,0,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0.241718899183244,0.200506470303285,0.0920809889358963,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0.509752546090077,0.831076008928724,0,0,0,0,0,0,0.206082023295445,0.0915694648183434,0,0,0,0,0.193341436584244,0.154048617114644,0.307007349452259,0.137836572484531,0.107420244868274,0.290033387828457,0.170453254832202,0,0.165284915360978,0,0.510450849978337,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0.136499911407986,0.141405431953713,0,0,0.66343897524122,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,1.92495971052672,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.284136146806413,0.47748896947538,0.296964680832639,0.307160702099232,0.994147647766298,0.140669416410513,0.667852230137435,0.329607748453519,0,1.79323189425963,0.552567831062295,0,0.409074730008619,0,0.311039587661807,0.359473404589307,0,0,0.0986434056369336,0,0,0,0.278304294485554,0,0,0,0,0.1137934482855,0,0,0,0.291604613383254,0,0.885741385813839,0.361789315876224,0,0.331737779793674,0,0,0,0,0.307801034015188,0.227884111694002,0,0.179515288819544,0.108647371922008,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0.167821586975843,0.189753732724185,0,0.421996129056054,0.163232808159148,0,0,0,0.176915129006678,0.611030144933625,0.296521128680622,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0.252746318513952,0,0,0,0.661983911750998,0,0,0,0.277349346026277,0.173559738335131,0,0.174118413160805,0.34945333648406,0.51595809741485,0,0,0,0.0969890164884194,0.441280633457501,0,0.411125773940253,0.19871461170299,0.0633107959558787,0,0.0801588202515337,0.426905989478705,0,0,0.229073192331831,0,0.14405479798815,0.372757606696298,0,0.135904206073614,0.209205692624666,0,0,0.600420288709789,0.136905378891993,0,0.859530882839914,0,1.11712960508902,0.916641696046735,1.43574604915363,0.399358000997982,0.429226048136571,0,0.873385142327441,0.360299883542404,1.16495949527454,0.0787831823072236,0.0824158583811665,0.13480708770837,0.196854963029498,0,0.795229689809303,0.136203406111576,0,0,0,0,0,0.121499113316049,0,0.157611414598396,0,0.422401346077626,0.179287339332845,0.191915197319445,0,0,0,0,0,0.326587360109409,0,0,0,0.113312091520126,0.293104467356165,0,1.68067843270016,0.92562821219883,0,0,0,0,0,0,0,0,0,1.08803560673895,0.5013797880454,0,0.983617892129413,0,0,0,0.250381861413,2.29363678276028,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0.899606224327209,0,0,0.53168342911599,2.08698024724694,0,0.761610424337591,0,0,0,0.464033759878494,1.19428766609585,0,0,0,0,0.192619830407303,0,0,0,0.231522474323834,0.244736704506468,0.179088841081487,0,0,0.176689145945881,0,0,0,0,0,0.138258436151731,0,0,0,0,0.245772908753719,0.211312123358627,0,0,0,0,0,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0.247871528518004,0,0.318004350653419,0,0,0,0,0,0,0.319267718114302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| ||
|short_description=p@chr14:55184619..55184621,+ | |short_description=p@chr14:55184619..55184621,+ | ||
}} | }} |
Latest revision as of 21:13, 24 July 2015
Short description: | p@chr14:55184619..55184621, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:55184619..55184621, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone matrix secreting cell | 3.48e-07 | 2 |
osteocyte | 3.48e-07 | 2 |
osteoclast | 3.48e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
atrioventricular valve | 4.76e-24 | 2 |
valve | 2.20e-16 | 3 |
cardiac mesenchyme | 2.20e-16 | 3 |
cardial valve | 2.20e-16 | 3 |
tunica intima | 2.20e-16 | 3 |
heart layer | 2.20e-16 | 3 |
endocardium | 2.20e-16 | 3 |
endocardial cushion | 2.20e-16 | 3 |
presumptive endocardium | 2.20e-16 | 3 |
tricuspid valve | 4.77e-13 | 1 |
right atrium valve | 4.77e-13 | 1 |
outflow tract of atrium | 4.77e-13 | 1 |
outflow part of right atrium | 4.77e-13 | 1 |
right cardiac atrium | 4.77e-13 | 1 |
mitral valve | 8.64e-13 | 1 |
brainstem | 6.02e-09 | 6 |
posterior neural tube | 1.12e-07 | 15 |
chordal neural plate | 1.12e-07 | 15 |
blood vessel layer | 1.52e-07 | 7 |
locus ceruleus | 3.09e-07 | 2 |
brainstem nucleus | 3.09e-07 | 2 |
hindbrain nucleus | 3.09e-07 | 2 |
dorsal plus ventral thalamus | 3.28e-07 | 2 |
thalamic complex | 3.28e-07 | 2 |
cardiac atrium | 3.70e-07 | 2 |
future cardiac atrium | 3.70e-07 | 2 |
open tracheal system trachea | 3.93e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
teratoma | 2.43e-07 | 2 |
giant cell tumor | 3.48e-07 | 2 |
bone giant cell tumor | 3.48e-07 | 2 |