FFCP PHASE1:Hg19::chr14:62024143..62024161,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:62024143..62024161,+ | |||
|description=CAGE_peak_at_chr14:62024143..62024161,+ | |description=CAGE_peak_at_chr14:62024143..62024161,+ | ||
|id=chr14:62024143..62024161,+ | |id=chr14:62024143..62024161,+ | ||
|ontology_enrichment_celltype=CL:0000359!6.78e-13!32;CL:0002334!4.57e-12!12;CL:0000569!4.13e-11!4;CL:0000011!4.13e-11!4;CL:0002539!2.40e-09!10;CL:0000192!5.19e-09!42;CL:0000514!5.19e-09!42;CL:0000680!9.03e-09!57;CL:0000056!9.03e-09!57;CL:0000355!9.03e-09!57;CL:0002580!1.69e-08!3;CL:0000055!7.24e-08!180;CL:0002494!2.07e-07!16;CL:0000187!2.89e-07!54;CL:0000197!4.19e-07!6;CL:0000098!4.19e-07!6;CL:0002167!4.19e-07!6 | |ontology_enrichment_celltype=CL:0000359!6.78e-13!32;CL:0002334!4.57e-12!12;CL:0000569!4.13e-11!4;CL:0000011!4.13e-11!4;CL:0002539!2.40e-09!10;CL:0000192!5.19e-09!42;CL:0000514!5.19e-09!42;CL:0000680!9.03e-09!57;CL:0000056!9.03e-09!57;CL:0000355!9.03e-09!57;CL:0002580!1.69e-08!3;CL:0000055!7.24e-08!180;CL:0002494!2.07e-07!16;CL:0000187!2.89e-07!54;CL:0000197!4.19e-07!6;CL:0000098!4.19e-07!6;CL:0002167!4.19e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002592;3.50e-14;3!CL:0000319;1.24e-11;1!CL:0000511;3.81e-11;1!CL:0002625;3.81e-11;1!CL:0000216;3.81e-11;1!CL:0000134;6.09e-08;55!CL:0000048;1.19e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0002592,2.77e-14,3;CL:0000319,1.31e-11,1;CL:0000511,3.63e-11,1;CL:0002625,3.63e-11,1;CL:0000216,3.63e-11,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!4.14e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.13e-25;14!DOID:120;1.03e-17;27!DOID:193;1.90e-16;29!DOID:3030;1.24e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.29e-25,14;DOID:120,1.11e-17,27;DOID:193,2.04e-16,29;DOID:3030,1.31e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0004573!2.06e-14!33;UBERON:0004571!2.06e-14!33;UBERON:0001637!3.56e-12!42;UBERON:0003509!3.56e-12!42;UBERON:0004572!3.56e-12!42;UBERON:0004872!1.78e-09!84;UBERON:0004237!2.40e-09!10;UBERON:0004695!2.40e-09!10;UBERON:0002111!2.40e-09!10;UBERON:0004178!2.40e-09!10;UBERON:0004535!3.30e-08!110;UBERON:0002049!5.28e-08!79;UBERON:0007798!5.28e-08!79;UBERON:0001134!6.20e-08!61;UBERON:0002036!6.20e-08!61;UBERON:0003082!6.20e-08!61;UBERON:0001009!7.83e-08!113;UBERON:0002385!1.48e-07!63;UBERON:0001015!1.48e-07!63;UBERON:0000383!1.48e-07!63;UBERON:0001981!2.36e-07!60;UBERON:0007500!2.36e-07!60;UBERON:0004537!2.36e-07!60;UBERON:0006965!2.36e-07!60;UBERON:0000992!5.23e-07!13;UBERON:0000947!7.73e-07!21;UBERON:0010191!7.73e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0003498;3.50e-14;3!UBERON:0005985;3.50e-14;3!UBERON:0001621;3.50e-14;3!UBERON:0000992;7.87e-13;13!UBERON:0000991;5.60e-12;21!UBERON:0001136;3.81e-11;1!UBERON:0001343;3.81e-11;1!UBERON:0004910;3.81e-11;1!UBERON:0004813;3.81e-11;1!UBERON:0002119;4.45e-11;4!UBERON:0002118;3.12e-09;5!UBERON:0003134;7.69e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001621,2.77e-14,3;UBERON:0000992,7.88e-13,13;UBERON:0000991,5.54e-12,21;UBERON:0009196,5.54e-12,21;UBERON:0009117,5.54e-12,21;UBERON:0005564,5.54e-12,21;UBERON:0004176,1.97e-11,22;UBERON:0001136,3.63e-11,1;UBERON:0001343,3.63e-11,1;UBERON:0004910,3.63e-11,1;UBERON:0005154,3.63e-11,1;UBERON:0005295,3.63e-11,1;UBERON:0004813,3.63e-11,1;UBERON:0005297,3.63e-11,1;UBERON:0005294,3.63e-11,1;UBERON:0010141,3.63e-11,1;UBERON:0005891,3.63e-11,1;UBERON:0002119,4.45e-11,4;UBERON:0002118,3.12e-09,5;UBERON:0003498,6.19e-09,5;UBERON:0005985,6.19e-09,5;UBERON:0002323,1.74e-07,46;UBERON:0003133,3.49e-07,48;UBERON:0004458,5.35e-07,49;UBERON:0003134,8.99e-07,37;UBERON:0000474,8.99e-07,37 | |||
|phase1_expression=0.363356758541113,0,0.986680828671798,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.529636723252875,0,0,0,0,0,0,0,0.490385709340376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.907457465280168,0,0,0,0,0,0,0,0,0,0.252433774244115,0.0920498986422993,0.484938170456436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0.237270619111097,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0.686271241194102,0,0,0,0,0,0,0,17.5054911512366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.623912584592421,0.535286966391485,0.473107245101804,0.35142424497814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.744323423456331,0.306923946576125,0.841980283299221,1.66580894032411,0,0.160853921143607,0,0.154209693802656,0.177561725313127,0.328508624055237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0.929691098594572,0,0.6970372701606,1.84820148105653,0,1.73986598415015,0.55597265731176,0.858749320451947,0,0,0.190630193923825,0,0,0.318203247925937,0,0,0,0,1.81964233415984,0,2.10629228119491,0,0.243713489631284,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333926115068718,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315222829196793,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34329322598187,0.701139929541673,1.10961172300523,0,0.251567901752575,0.889811221596536,1.14420034198462,0.907385542579434,0.466311601748341,0.591420599958536,3.02663857611035,0,3.72631096503023,0,0,7.82617592717601,0,1.14241563650639,9.76489759691188,0,8.05579177818663,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.6189601713653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,6.45456219851264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342976018874837,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72247662797184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,1.29787968637137,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0.363356758541113,0,0.986680828671798,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.529636723252875,0,0,0,0,0,0,0,0.490385709340376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.907457465280168,0,0,0,0,0,0,0,0,0,0.252433774244115,0.0920498986422993,0.484938170456436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0.237270619111097,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0.686271241194102,0,0,0,0,0,0,0,17.5054911512366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.623912584592421,0.535286966391485,0.473107245101804,0.35142424497814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.744323423456331,0.306923946576125,0.841980283299221,1.66580894032411,0,0.160853921143607,0,0.154209693802656,0.177561725313127,0.328508624055237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0.929691098594572,0,0.6970372701606,1.84820148105653,0,1.73986598415015,0.55597265731176,0.858749320451947,0,0,0.190630193923825,0,0,0.318203247925937,0,0,0,0,1.81964233415984,0,2.10629228119491,0,0.243713489631284,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333926115068718,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315222829196793,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34329322598187,0.701139929541673,1.10961172300523,0,0.251567901752575,0.889811221596536,1.14420034198462,0.907385542579434,0.466311601748341,0.591420599958536,3.02663857611035,0,3.72631096503023,0,0,7.82617592717601,0,1.14241563650639,9.76489759691188,0,8.05579177818663,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.6189601713653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,6.45456219851264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342976018874837,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72247662797184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,1.29787968637137,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr14:62024143..62024161,+ | |short_description=p@chr14:62024143..62024161,+ | ||
}} | }} |
Latest revision as of 21:41, 24 July 2015
Short description: | p@chr14:62024143..62024161, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:62024143..62024161, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the coronary artery | 2.77e-14 | 3 |
mucus secreting cell | 1.31e-11 | 1 |
androgen binding protein secreting cell | 3.63e-11 | 1 |
seminiferous tubule epithelial cell | 3.63e-11 | 1 |
Sertoli cell | 3.63e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
coronary artery | 2.77e-14 | 3 |
female gonad | 7.88e-13 | 13 |
gonad | 5.54e-12 | 21 |
indifferent external genitalia | 5.54e-12 | 21 |
indifferent gonad | 5.54e-12 | 21 |
gonad primordium | 5.54e-12 | 21 |
external genitalia | 1.97e-11 | 22 |
mesothelium | 3.63e-11 | 1 |
seminiferous tubule of testis | 3.63e-11 | 1 |
epithelium of male gonad | 3.63e-11 | 1 |
epithelial cord | 3.63e-11 | 1 |
sex cord | 3.63e-11 | 1 |
seminiferous tubule epithelium | 3.63e-11 | 1 |
testis sex cord | 3.63e-11 | 1 |
genital ridge | 3.63e-11 | 1 |
primitive sex cord of indifferent gonad | 3.63e-11 | 1 |
coelomic epithelium | 3.63e-11 | 1 |
left ovary | 4.45e-11 | 4 |
right ovary | 3.12e-09 | 5 |
heart blood vessel | 6.19e-09 | 5 |
coronary vessel | 6.19e-09 | 5 |
body cavity | 1.74e-07 | 46 |
reproductive organ | 3.49e-07 | 48 |
body cavity or lining | 5.35e-07 | 49 |
female reproductive organ | 8.99e-07 | 37 |
female reproductive system | 8.99e-07 | 37 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.29e-25 | 14 |
female reproductive organ cancer | 1.11e-17 | 27 |
reproductive organ cancer | 2.04e-16 | 29 |
mucinous adenocarcinoma | 1.31e-11 | 1 |