FFCP PHASE1:Hg19::chr14:75083647..75083654,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-297bp_to_ENST00000555313_5end | |||
|cluster_id=chr14:75083647..75083654,- | |||
|coexpression_cluster_id=C38 | |||
|description=CAGE_peak_5_at_ENST00000555313_5end | |||
|id=chr14:75083647..75083654,- | |||
|ontology_enrichment_celltype=CL:0000064!1.77e-18!3;CL:0005012!1.77e-18!3;CL:0000067!1.77e-18!3;CL:0002304!1.77e-18!3;CL:0000319!7.13e-15!1;CL:0000327!3.16e-09!14;CL:0000632!4.09e-08!2;CL:0000159!4.38e-08!2;CL:0002575!5.02e-08!2;CL:0002589!5.37e-08!2;CL:0002549!6.58e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0000632;3.66e-23;3!CL:0000327;1.08e-18;15!CL:0000138;2.19e-12;6!CL:0000499;1.43e-10;28!CL:0000153;1.04e-08;9!CL:0000447;1.04e-08;9!CL:0000151;1.23e-08;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000632,4.09e-23,3;CL:0000327,1.13e-18,15;CL:0000058,2.19e-12,6;CL:0000138,2.19e-12,6;CL:0000499,1.47e-10,28;CL:0000153,1.04e-08,9;CL:0000447,1.04e-08,9;CL:0000151,1.85e-08,36 | |||
|ontology_enrichment_development_v019=UBERON:0003918;6.34e-08;10!UBERON:0007687;6.34e-08;10 | |||
|ontology_enrichment_disease=DOID:3371!4.73e-15!1;DOID:4549!4.73e-15!1;DOID:5861!4.73e-15!1;DOID:6496!4.73e-15!1;DOID:3030!7.13e-15!1 | |||
|ontology_enrichment_disease_v019=DOID:3371;1.23e-66;1!DOID:4549;1.23e-66;1!DOID:5861;1.23e-66;1!DOID:6496;1.23e-66;1!DOID:201;2.19e-12;6!DOID:0060100;2.19e-12;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.23e-66,1;DOID:4549,1.23e-66,1;DOID:5861,1.23e-66,1;DOID:6496,1.23e-66,1;DOID:201,2.19e-12,6;DOID:0060100,2.19e-12,6 | |||
|ontology_enrichment_uberon=UBERON:0001778!1.77e-18!3;UBERON:0001775!1.77e-18!3;UBERON:0002363!3.15e-14!1;UBERON:0007647!3.15e-14!1;UBERON:0010115!3.15e-14!1;UBERON:0000488!4.12e-14!4;UBERON:0002200!2.26e-11!11;UBERON:0006876!2.26e-11!11;UBERON:0007625!2.34e-11!11;UBERON:0000019!2.65e-11!19;UBERON:0000047!2.65e-11!19;UBERON:0004088!2.65e-11!19;UBERON:0003072!2.65e-11!19;UBERON:0003071!2.65e-11!19;UBERON:0004128!2.65e-11!19;UBERON:0000970!9.43e-11!20;UBERON:0002104!2.98e-10!21;UBERON:0001456!2.98e-10!21;UBERON:0002203!1.01e-09!6;UBERON:0001768!1.01e-09!6;UBERON:0000020!2.21e-09!23;UBERON:0001801!4.81e-09!14;UBERON:0001032!5.32e-09!24;UBERON:0004456!5.32e-09!24;UBERON:0001529!5.37e-08!2;UBERON:0007204!5.37e-08!2;UBERON:0003947!6.58e-08!2;UBERON:0005629!6.58e-08!2;UBERON:0005358!6.58e-08!2;UBERON:0001886!6.58e-08!2;UBERON:0004086!6.58e-08!2;UBERON:0005282!6.58e-08!2;UBERON:0005281!6.58e-08!2;UBERON:0002360!9.19e-08!2;UBERON:0000094!9.19e-08!2;UBERON:0007645!9.19e-08!2;UBERON:0005085!1.74e-07!29 | |||
|ontology_enrichment_uberon_v019=UBERON:0002418;2.62e-23;3!UBERON:0004755;2.62e-23;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002418,2.62e-23,3;UBERON:0004755,2.62e-23,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02989091390451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5256112259285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@ENST00000555313 | |||
}} |
Latest revision as of 22:44, 24 July 2015
Short description: | p5@ENST00000555313 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ENST00000555313_5end |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | -297bp_to_ENST00000555313_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stellate cell | 4.09e-23 | 3 |
extracellular matrix secreting cell | 1.13e-18 | 15 |
chondroblast | 2.19e-12 | 6 |
chondrocyte | 2.19e-12 | 6 |
stromal cell | 1.47e-10 | 28 |
GAG secreting cell | 1.04e-08 | 9 |
carbohydrate secreting cell | 1.04e-08 | 9 |
secretory cell | 1.85e-08 | 36 |
Ontology term | p-value | n |
---|---|---|
cartilage tissue | 2.62e-23 | 3 |
skeletal tissue | 2.62e-23 | 3 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.23e-66 | 1 |
extraosseous chondrosarcoma | 1.23e-66 | 1 |
myxoid chondrosarcoma | 1.23e-66 | 1 |
extraskeletal myxoid chondrosarcoma | 1.23e-66 | 1 |
connective tissue cancer | 2.19e-12 | 6 |
musculoskeletal system cancer | 2.19e-12 | 6 |