FFCP PHASE1:Hg19::chr15:36045989..36046028,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:36045989..36046028,+ | |||
|coexpression_cluster_id=C199 | |||
|description=CAGE_peak_at_chr15:36045989..36046028,+ | |description=CAGE_peak_at_chr15:36045989..36046028,+ | ||
|id=chr15:36045989..36046028,+ | |id=chr15:36045989..36046028,+ | ||
|ontology_enrichment_celltype=CL:0002319!5.99e-12!25;CL:0000243!4.53e-10!15;CL:0000125!4.53e-10!15;CL:0000030!4.53e-10!15;CL:0000339!4.53e-10!15;CL:0000128!3.54e-09!7;CL:0000126!3.54e-09!7;CL:0000127!3.54e-09!7;CL:0002453!3.54e-09!7;CL:0000095!5.47e-09!17;CL:0000123!5.47e-09!17;CL:0000167!1.31e-08!1;CL:0000164!1.31e-08!1;CL:0000502!1.31e-08!1;CL:0000172!1.31e-08!1;CL:0000173!1.31e-08!1;CL:0002351!1.31e-08!1;CL:0000133!7.17e-08!59 | |ontology_enrichment_celltype=CL:0002319!5.99e-12!25;CL:0000243!4.53e-10!15;CL:0000125!4.53e-10!15;CL:0000030!4.53e-10!15;CL:0000339!4.53e-10!15;CL:0000128!3.54e-09!7;CL:0000126!3.54e-09!7;CL:0000127!3.54e-09!7;CL:0002453!3.54e-09!7;CL:0000095!5.47e-09!17;CL:0000123!5.47e-09!17;CL:0000167!1.31e-08!1;CL:0000164!1.31e-08!1;CL:0000502!1.31e-08!1;CL:0000172!1.31e-08!1;CL:0000173!1.31e-08!1;CL:0002351!1.31e-08!1;CL:0000133!7.17e-08!59 | ||
|ontology_enrichment_celltype_v019=CL:0000047;7.04e-34;2!CL:0002319;5.98e-23;25!CL:0000243;1.17e-16;15!CL:0000125;1.17e-16;15!CL:0000095;4.91e-15;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,5.98e-23,25;CL:0000243,1.17e-16,15;CL:0000125,1.17e-16,15;CL:0000030,1.17e-16,15;CL:0000339,1.17e-16,15;CL:0000095,4.91e-15,17;CL:0000123,4.91e-15,17;CL:0000133,8.52e-11,59;CL:0000047,1.47e-09,8;CL:0000221,4.40e-09,72;CL:0000333,2.86e-07,41 | |||
|ontology_enrichment_development_v019=UBERON:0006238;4.86e-25;10!CL:0000339;1.17e-16;15!CL:0000133;6.56e-08;59 | |||
|ontology_enrichment_disease=DOID:4430!1.31e-08!1 | |ontology_enrichment_disease=DOID:4430!1.31e-08!1 | ||
|ontology_enrichment_disease_v019=DOID:3093;4.59e-23;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,4.59e-23,11 | |||
|ontology_enrichment_uberon=UBERON:0000369!4.22e-16!4;UBERON:0002435!4.22e-16!4;UBERON:0000204!4.22e-16!4;UBERON:0010082!4.22e-16!4;UBERON:0001017!1.94e-15!82;UBERON:0001829!3.14e-15!2;UBERON:0005743!1.32e-14!86;UBERON:0000073!5.54e-13!94;UBERON:0001016!5.54e-13!94;UBERON:0004121!3.69e-12!169;UBERON:0000924!8.54e-12!173;UBERON:0006601!8.54e-12!173;UBERON:0000955!1.23e-11!69;UBERON:0006238!1.23e-11!69;UBERON:0001044!2.46e-11!6;UBERON:0003293!2.46e-11!6;UBERON:0003294!2.46e-11!6;UBERON:0010047!2.46e-11!6;UBERON:0000167!2.46e-11!6;UBERON:0000033!6.24e-11!123;UBERON:0000153!2.74e-10!129;UBERON:0007811!2.74e-10!129;UBERON:0005383!2.98e-10!3;UBERON:0005382!2.98e-10!3;UBERON:0009663!1.99e-09!7;UBERON:0003075!5.86e-09!86;UBERON:0007284!5.86e-09!86;UBERON:0001831!1.63e-08!1;UBERON:0001567!1.63e-08!1;UBERON:0008801!1.63e-08!1;UBERON:0002346!1.80e-08!90;UBERON:0001736!2.02e-08!1;UBERON:0006298!2.02e-08!1;UBERON:0001874!2.50e-08!1;UBERON:0001882!4.41e-08!1;UBERON:0005403!4.41e-08!1;UBERON:0001049!4.83e-08!57;UBERON:0005068!4.83e-08!57;UBERON:0006241!4.83e-08!57;UBERON:0007135!4.83e-08!57;UBERON:0002363!7.16e-08!1;UBERON:0007647!7.16e-08!1;UBERON:0010115!7.16e-08!1;UBERON:0002616!9.93e-08!59;UBERON:0002308!1.96e-07!9;UBERON:0002420!1.96e-07!9;UBERON:0000125!1.96e-07!9;UBERON:0007245!1.96e-07!9;UBERON:0010009!1.96e-07!9;UBERON:0010011!1.96e-07!9;UBERON:0000454!1.96e-07!9;UBERON:0003408!5.59e-07!10;UBERON:0001869!5.92e-07!32;UBERON:0002791!9.83e-07!33 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.31e-08,81;UBERON:0001016,1.68e-07,89 | |||
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|short_description=p@chr15:36045989..36046028,+ | |short_description=p@chr15:36045989..36046028,+ | ||
}} | }} |
Latest revision as of 01:03, 25 July 2015
Short description: | p@chr15:36045989..36046028, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:36045989..36046028, + |
Coexpression cluster: | C199_glioblastoma_B_osteosarcoma_Fibroblast_heart_rhabdomyosarcoma_myxofibrosarcoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 5.98e-23 | 25 |
glial cell (sensu Vertebrata) | 1.17e-16 | 15 |
glial cell | 1.17e-16 | 15 |
glioblast | 1.17e-16 | 15 |
glioblast (sensu Vertebrata) | 1.17e-16 | 15 |
neuron associated cell | 4.91e-15 | 17 |
neuron associated cell (sensu Vertebrata) | 4.91e-15 | 17 |
neurectodermal cell | 8.52e-11 | 59 |
neuronal stem cell | 1.47e-09 | 8 |
ectodermal cell | 4.40e-09 | 72 |
migratory neural crest cell | 2.86e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 3.31e-08 | 81 |
nervous system | 1.68e-07 | 89 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 4.59e-23 | 11 |