FFCP PHASE1:Hg19::chr15:39878338..39878368,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:39878338..39878368,+ | |||
|coexpression_cluster_id=C1206 | |||
|description=CAGE_peak_at_chr15:39878338..39878368,+ | |description=CAGE_peak_at_chr15:39878338..39878368,+ | ||
|id=chr15:39878338..39878368,+ | |id=chr15:39878338..39878368,+ | ||
|ontology_enrichment_celltype=CL:0000057!5.33e-09!75;CL:0002057!4.51e-08!42;CL:0000860!3.45e-07!45;CL:0002334!3.82e-07!12;CL:0002620!8.22e-07!23 | |ontology_enrichment_celltype=CL:0000057!5.33e-09!75;CL:0002057!4.51e-08!42;CL:0000860!3.45e-07!45;CL:0002334!3.82e-07!12;CL:0002620!8.22e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0002334;9.42e-13;12!CL:0002620;9.77e-11;23!CL:0000860;2.34e-10;33!CL:0002057;2.34e-10;33!CL:0000473;3.81e-07;39!CL:0000234;3.81e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.08e-15,76;CL:0002334,4.16e-13,12;CL:0002620,1.11e-10,23;CL:0000860,1.96e-10,42;CL:0002057,1.96e-10,42;CL:0000473,2.09e-08,48;CL:0000234,2.09e-08,48;CL:0000134,3.45e-08,354;CL:0002320,5.16e-08,361;CL:0000048,5.96e-07,427;CL:0000723,6.13e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;2.38e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;1.99e-08;5!DOID:450;1.99e-08;5!DOID:66;1.99e-08;5!DOID:423;1.99e-08;5!DOID:0080000;1.99e-08;5!DOID:11722;1.99e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.19e-08,5;DOID:450,2.19e-08,5;DOID:66,2.19e-08,5;DOID:423,2.19e-08,5;DOID:0080000,2.19e-08,5;DOID:11722,2.19e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0000468!8.83e-10!659;UBERON:0000467!1.35e-07!625;UBERON:0000480!1.80e-07!626;UBERON:0003102!6.39e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.77e-09;9!UBERON:0000042;1.77e-09;9!UBERON:0003688;4.22e-09;6!UBERON:0002358;4.22e-09;6!UBERON:0003684;4.22e-09;6!UBERON:0001178;4.22e-09;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,3.00e-09,46;UBERON:0002416,3.00e-09,46;UBERON:0003688,3.33e-09,6;UBERON:0002358,3.33e-09,6;UBERON:0003684,3.33e-09,6;UBERON:0001178,3.33e-09,6;UBERON:0002097,6.15e-09,41;UBERON:0002384,3.27e-08,371;UBERON:0004457,9.09e-07,12;UBERON:0000042,9.09e-07,12 | |||
|phase1_expression=6.17706489519893,13.7024335290229,4.36958652697511,3.00219895059391,2.23480547213644,4.36169262050184,0,0,0,0,0,0.436882744260345,0.263766978228454,0.123766352960047,0,2.01697543935533,1.20538905604795,0,0,0,0,0,0,0.273748850145768,0.376627918784408,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,14.4392002178502,1.08505435357926,0,0,0.257575567634187,1.45398238779565,0.377875943688809,0,13.4808841405297,1.23350366406548,0.929119112685311,9.20615655430881,3.33008918487831,0.236482229888585,8.96338769915208,1.29096936716765,0,10.1650863353007,1.36453075028923,0.898893937780338,4.28517449319264,0.641858054152187,0,2.96866170168044,0.199463657621632,0,35.6957363513158,10.2129340444405,4.35975574296902,8.54245461872927,1.5644487552606,0.217188844705117,16.345786571101,1.10483290796269,0,0,0.637812899895131,0,0.112328631146495,1.20141514273205,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,0,4.69870898099936,0.50133791063589,0.869079113764942,0,0.973269740605272,0,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0.596287222100115,0,0.347140501607594,0,0.419499436209906,0.550236083880135,0.208994966536811,1.03366703667732,1.06729878806013,1.67360306382335,0.805658634218294,0,3.1728067481262,0.367663080345869,0,0.892997282840798,1.12264686313085,1.35133776579987,1.53316637465883,0,1.09921046358244,0,0,0,4.96971951695318,0.633152558322899,8.60659675285922,1.14734648299525,1.41867352879343,0,0,1.2333377420858,0.311211035399766,0,0.817309515567294,0,0,0,0,0,0.896692083310806,0,0,0,0.204154171254893,0.122834317311768,0.206651562351531,0,3.4617370098998,0,0,0,0,0.277064115484183,3.07284334616587,1.22595118319608,0.45071417671979,0.113432183160021,28.1641728031513,7.04739383101272,5.29829752898905,8.40255069036326,1.23663035086127,16.7466351029659,4.09457083929498,12.1518959213712,2.53336213419116,20.9520032622615,3.31379635112278,1.13152239773168,12.0703261455649,0.503760491138201,2.7129694769678,0,0.818238361772504,0.573609190778008,0,0,0,0,0,0.36497735907583,1.56449532329816,3.85944562915731,0,6.03678306441573,0.721879481669586,0.354920400119532,0,0,0.220587945464788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.219500570817251,0,1.80952150340936,0.185176890317059,0,0,0,0,0,0,0.462985512576611,2.85381228351897,0,0.858486162094873,0,0,0,0,1.00789276919316,0.425325291727159,0.53735113621709,1.16253575405585,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,2.12750493267896,2.08014873822732,0,0,0,2.57360388584666,0,0,0,0.355391948742546,0.791951872933429,0,0,0.099972991182057,0,0.502257091432126,0,0.718874566474748,1.14861935834114,0,0.579125226670317,0.61642896765115,0.537182889719687,0,0.394061520403854,0,0,0,0,0.773288812777695,0.335032530668698,1.27587750330633,0.749007023947182,0,0,0.12269149171914,1.00034104211935,0,21.8369404607347,19.4487597788906,18.6088849740043,7.73133338951907,0,0,0,1.32845119707087,0.368738337083406,0.868836144680828,0,0,0.82707210449155,0.431428401637234,0.213455115606889,0,0,0.907170879989041,6.69891081110698,17.187741008263,6.73584226639377,1.79394808957981,5.62877973973374,7.07757253031873,1.48418066444991,1.23367755042124,1.77561725313127,1.23190734020714,1.55776328755086,0,0.120859449591622,1.60405176242628,0.368323955743585,0.114814448164607,0,0.655622074797121,0,0.0770153371044148,0,0,0.105551628892876,0,0.510281115829547,1.94324324491925,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0,1.95018073810956,0,0,0,0,0.551346289938122,0.107420244868274,0.145016693914229,0.255679882248303,0.445160178233687,0.165284915360978,0.960950336825531,27.6919586113248,0.10115778085555,0,3.1481234683064,0,0,0,0,0,0,0,0,0.571890581771475,0,0,0,0,0.719489830333259,0.54907405947211,0.235624804691373,0,0,0,0,0.487426979262569,0,0.272999822815972,1.83827061539827,0,0,0,0,0.578775534266688,0,0,0.30982349809975,0,0.430234056612155,0,0.35667105148125,0,1.26664581178598,1.31717957183961,0,0,0.192444225451024,0,0,0,0,0,0.886860307073351,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0.593929361665277,1.22864280839693,0,0,2.67140892054974,0,0,0.796991953004279,1.93398740871803,0,0.306806047506464,0,0.933118762985422,0.269605053441981,0.179021174675609,0,0.197286811273867,0,0,0,0,0,0.260427761085233,0.0874599999961957,1.44999915086959,0.1137934482855,0.254253650292766,0.236387681767936,0,0,0,0.885741385813839,0,0,0.110579259931225,0,0,0.21787692703798,0.278847488557207,0.153900517007594,0.113942055847001,0,0,0.108647371922008,0.31900115973192,0.732780747214898,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0.141353071433941,0,1.99052386215701,0.0884575645033392,0,0,0,0,0,0,0,0.182454789215666,0,0,0,4.83962864194656,0.61214552326098,0.505492637027904,0,0,0,0,0,0,0,0.832048038078832,0,0.195984794828755,0.174118413160805,0.34945333648406,0,0,0,0.0821154570532092,0,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| ||
|short_description=p@chr15:39878338..39878368,+ | |short_description=p@chr15:39878338..39878368,+ | ||
}} | }} |
Latest revision as of 01:15, 25 July 2015
Short description: | p@chr15:39878338..39878368, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:39878338..39878368, + |
Coexpression cluster: | C1206_Fibroblast_CD14_Small_Olfactory_Preadipocyte_Adipocyte_hepatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.08e-15 | 76 |
preadipocyte | 4.16e-13 | 12 |
skin fibroblast | 1.11e-10 | 23 |
classical monocyte | 1.96e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.96e-10 | 42 |
defensive cell | 2.09e-08 | 48 |
phagocyte | 2.09e-08 | 48 |
mesenchymal cell | 3.45e-08 | 354 |
connective tissue cell | 5.16e-08 | 361 |
multi fate stem cell | 5.96e-07 | 427 |
somatic stem cell | 6.13e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
integument | 3.00e-09 | 46 |
integumental system | 3.00e-09 | 46 |
omentum | 3.33e-09 | 6 |
peritoneum | 3.33e-09 | 6 |
abdominal cavity | 3.33e-09 | 6 |
visceral peritoneum | 3.33e-09 | 6 |
skin of body | 6.15e-09 | 41 |
connective tissue | 3.27e-08 | 371 |
cavity lining | 9.09e-07 | 12 |
serous membrane | 9.09e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.19e-08 | 5 |
myotonic disease | 2.19e-08 | 5 |
muscle tissue disease | 2.19e-08 | 5 |
myopathy | 2.19e-08 | 5 |
muscular disease | 2.19e-08 | 5 |
myotonic dystrophy | 2.19e-08 | 5 |