FFCP PHASE1:Hg19::chr15:58790937..58790951,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-3bp_to_ENST00000561083,uc002afb.1_5end | |association_with_transcript=-3bp_to_ENST00000561083,uc002afb.1_5end | ||
|cluster_id=chr15:58790937..58790951,- | |||
|coexpression_cluster_id=C224 | |coexpression_cluster_id=C224 | ||
|description=CAGE_peak_1_at_ENST00000561083_5end,CAGE_peak_1_at_uc002afb.1_5end | |description=CAGE_peak_1_at_ENST00000561083_5end,CAGE_peak_1_at_uc002afb.1_5end | ||
|id=chr15:58790937..58790951,- | |id=chr15:58790937..58790951,- | ||
|ontology_enrichment_celltype=CL:0002622!2.89e-14!3;CL:1000507!1.47e-12!12;CL:1000494!1.47e-12!12;CL:1000497!4.21e-11!18;CL:0002518!4.21e-11!18;CL:1000449!2.92e-09!16;CL:0002681!2.47e-08!13;CL:0002584!2.47e-08!13;CL:0000057!5.39e-08!75;CL:0000650!5.83e-07!3;CL:1000618!5.83e-07!3;CL:1001318!5.83e-07!3;CL:0002173!5.83e-07!3;CL:1000500!5.83e-07!3;CL:0000239!6.94e-07!3;CL:1000615!6.94e-07!3;CL:0002306!6.94e-07!3;CL:0002579!7.36e-07!3 | |ontology_enrichment_celltype=CL:0002622!2.89e-14!3;CL:1000507!1.47e-12!12;CL:1000494!1.47e-12!12;CL:1000497!4.21e-11!18;CL:0002518!4.21e-11!18;CL:1000449!2.92e-09!16;CL:0002681!2.47e-08!13;CL:0002584!2.47e-08!13;CL:0000057!5.39e-08!75;CL:0000650!5.83e-07!3;CL:1000618!5.83e-07!3;CL:1001318!5.83e-07!3;CL:0002173!5.83e-07!3;CL:1000500!5.83e-07!3;CL:0000239!6.94e-07!3;CL:1000615!6.94e-07!3;CL:0002306!6.94e-07!3;CL:0002579!7.36e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000650;9.86e-18;2!CL:1000500;9.86e-18;2!CL:1000618;9.86e-18;2!CL:1001318;9.86e-18;2!CL:0002173;9.86e-18;2!CL:0000669;1.50e-09;4!CL:1000497;9.62e-09;17!CL:0002518;9.62e-09;17!CL:0002149;8.72e-07;6!CL:0002255;8.72e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000650,1.27e-17,2;CL:1000500,1.27e-17,2;CL:1000618,1.27e-17,2;CL:1001318,1.27e-17,2;CL:0002173,1.27e-17,2;CL:0000669,1.70e-09,4;CL:1000497,1.00e-08,17;CL:0002518,1.00e-08,17;CL:0002149,8.02e-07,6;CL:0002255,8.02e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:4468!1.46e-10!2;DOID:17!2.97e-08!5;DOID:450!2.97e-08!5;DOID:66!2.97e-08!5;DOID:423!2.97e-08!5;DOID:0080000!2.97e-08!5;DOID:11722!2.97e-08!5 | |ontology_enrichment_disease=DOID:4468!1.46e-10!2;DOID:17!2.97e-08!5;DOID:450!2.97e-08!5;DOID:66!2.97e-08!5;DOID:423!2.97e-08!5;DOID:0080000!2.97e-08!5;DOID:11722!2.97e-08!5 | ||
|ontology_enrichment_disease_v019=DOID:4468;7.41e-67;2!DOID:299;1.07e-12;25!DOID:120;8.15e-12;27!DOID:193;4.72e-11;29!DOID:3001;8.72e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,7.41e-67,2;DOID:299,1.01e-12,25;DOID:120,7.72e-12,27;DOID:193,4.48e-11,29;DOID:3001,8.02e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0006554!6.50e-14!44;UBERON:0001008!1.53e-13!45;UBERON:0009773!1.47e-12!12;UBERON:0001231!1.47e-12!12;UBERON:0004810!1.47e-12!12;UBERON:0002113!1.75e-11!27;UBERON:0003918!1.75e-11!27;UBERON:0005095!1.75e-11!27;UBERON:0007687!1.75e-11!27;UBERON:0003064!6.47e-10!37;UBERON:0000489!1.94e-09!32;UBERON:0004211!2.92e-09!16;UBERON:0001285!2.92e-09!16;UBERON:0007684!2.92e-09!16;UBERON:0003220!2.92e-09!16;UBERON:0004208!2.92e-09!16;UBERON:0006555!1.12e-08!17;UBERON:0005103!1.12e-08!17;UBERON:0000083!1.12e-08!17;UBERON:0009201!1.12e-08!17;UBERON:0004819!1.12e-08!17;UBERON:0006553!1.12e-08!17;UBERON:0003074!1.12e-08!17;UBERON:0003060!1.12e-08!17;UBERON:0001225!2.47e-08!13;UBERON:0008987!2.47e-08!13;UBERON:0000080!3.68e-08!18;UBERON:0002120!3.68e-08!18;UBERON:0004875!3.68e-08!18;UBERON:0005721!3.68e-08!18;UBERON:0005754!3.68e-08!18;UBERON:0007297!3.68e-08!18;UBERON:0004876!2.79e-07!20;UBERON:0003567!5.83e-07!3;UBERON:0003838!5.83e-07!3;UBERON:0005169!5.83e-07!3;UBERON:0002321!5.83e-07!3;UBERON:0005215!5.83e-07!3;UBERON:0002303!5.83e-07!3;UBERON:0002319!5.83e-07!3;UBERON:0003887!6.65e-07!21;UBERON:0006853!6.94e-07!3;UBERON:0007685!6.94e-07!3;UBERON:0004134!6.94e-07!3 | |ontology_enrichment_uberon=UBERON:0006554!6.50e-14!44;UBERON:0001008!1.53e-13!45;UBERON:0009773!1.47e-12!12;UBERON:0001231!1.47e-12!12;UBERON:0004810!1.47e-12!12;UBERON:0002113!1.75e-11!27;UBERON:0003918!1.75e-11!27;UBERON:0005095!1.75e-11!27;UBERON:0007687!1.75e-11!27;UBERON:0003064!6.47e-10!37;UBERON:0000489!1.94e-09!32;UBERON:0004211!2.92e-09!16;UBERON:0001285!2.92e-09!16;UBERON:0007684!2.92e-09!16;UBERON:0003220!2.92e-09!16;UBERON:0004208!2.92e-09!16;UBERON:0006555!1.12e-08!17;UBERON:0005103!1.12e-08!17;UBERON:0000083!1.12e-08!17;UBERON:0009201!1.12e-08!17;UBERON:0004819!1.12e-08!17;UBERON:0006553!1.12e-08!17;UBERON:0003074!1.12e-08!17;UBERON:0003060!1.12e-08!17;UBERON:0001225!2.47e-08!13;UBERON:0008987!2.47e-08!13;UBERON:0000080!3.68e-08!18;UBERON:0002120!3.68e-08!18;UBERON:0004875!3.68e-08!18;UBERON:0005721!3.68e-08!18;UBERON:0005754!3.68e-08!18;UBERON:0007297!3.68e-08!18;UBERON:0004876!2.79e-07!20;UBERON:0003567!5.83e-07!3;UBERON:0003838!5.83e-07!3;UBERON:0005169!5.83e-07!3;UBERON:0002321!5.83e-07!3;UBERON:0005215!5.83e-07!3;UBERON:0002303!5.83e-07!3;UBERON:0002319!5.83e-07!3;UBERON:0003887!6.65e-07!21;UBERON:0006853!6.94e-07!3;UBERON:0007685!6.94e-07!3;UBERON:0004134!6.94e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0007195;5.97e-34;1!UBERON:0003567;9.86e-18;2!UBERON:0003838;9.86e-18;2!UBERON:0003586;9.86e-18;2!UBERON:0005169;9.86e-18;2!UBERON:0002321;9.86e-18;2!UBERON:0005215;9.86e-18;2!UBERON:0002303;9.86e-18;2!UBERON:0002319;9.86e-18;2!UBERON:0003891;1.50e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,7.06e-34,1;UBERON:0003567,1.27e-17,2;UBERON:0003838,1.27e-17,2;UBERON:0003586,1.27e-17,2;UBERON:0005169,1.27e-17,2;UBERON:0002321,1.27e-17,2;UBERON:0005215,1.27e-17,2;UBERON:0002303,1.27e-17,2;UBERON:0002319,1.27e-17,2;UBERON:0003891,1.70e-09,4 | |||
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| ||
|short_description=p1@ENST00000561083,p1@uc002afb.1 | |short_description=p1@ENST00000561083,p1@uc002afb.1 | ||
}} | }} |
Latest revision as of 02:55, 25 July 2015
Short description: | p1@ENST00000561083, p1@uc002afb.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000561083_5end, CAGE_peak_1_at_uc002afb.1_5end |
Coexpression cluster: | C224_clear_serous_pleomorphic_choriocarcinoma_mesothelioma_amniotic_renal |
Association with transcript: | -3bp_to_ENST00000561083, uc002afb.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesangial cell | 1.27e-17 | 2 |
kidney interstitial cell | 1.27e-17 | 2 |
juxtaglomerular complex cell | 1.27e-17 | 2 |
renal interstitial pericyte | 1.27e-17 | 2 |
extraglomerular mesangial cell | 1.27e-17 | 2 |
pericyte cell | 1.70e-09 | 4 |
kidney cell | 1.00e-08 | 17 |
kidney epithelial cell | 1.00e-08 | 17 |
epithelial cell of uterus | 8.02e-07 | 6 |
stromal cell of endometrium | 8.02e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 7.06e-34 | 1 |
abdomen connective tissue | 1.27e-17 | 2 |
abdominal segment connective tissue | 1.27e-17 | 2 |
trunk connective tissue | 1.27e-17 | 2 |
interstitial tissue | 1.27e-17 | 2 |
extraglomerular mesangium | 1.27e-17 | 2 |
kidney interstitium | 1.27e-17 | 2 |
juxtaglomerular apparatus | 1.27e-17 | 2 |
mesangium | 1.27e-17 | 2 |
stroma | 1.70e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 7.41e-67 | 2 |
adenocarcinoma | 1.01e-12 | 25 |
female reproductive organ cancer | 7.72e-12 | 27 |
reproductive organ cancer | 4.48e-11 | 29 |
female reproductive endometrioid cancer | 8.02e-07 | 6 |