FFCP PHASE1:Hg19::chr15:67360119..67360149,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr15:67360119..67360149,+ | |||
|description=CAGE_peak_at_chr15:67360119..67360149,+ | |||
|id=chr15:67360119..67360149,+ | |||
|ontology_enrichment_celltype=CL:0000222!2.91e-18!119;CL:0000055!7.87e-12!180;CL:0000220!6.18e-11!246;CL:0002321!1.60e-10!248;CL:0000183!2.93e-10!59;CL:0000680!2.70e-09!57;CL:0000056!2.70e-09!57;CL:0000355!2.70e-09!57;CL:0000192!6.68e-09!42;CL:0000514!6.68e-09!42;CL:0000187!1.11e-08!54;CL:0000213!1.54e-08!57;CL:0000215!1.54e-08!57;CL:0000077!1.72e-08!19;CL:0000393!8.31e-07!60;CL:0000211!8.31e-07!60;CL:0000076!8.75e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0000077;4.83e-16;19!CL:0000359;1.40e-08;32!CL:0000192;3.15e-08;43!CL:1000306;9.72e-08;4!CL:0002547;9.72e-08;4!CL:0002622;1.88e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.85e-18,121;CL:0000077,6.32e-16,19;CL:0000192,7.83e-11,43;CL:0000514,7.83e-11,43;CL:0000359,1.14e-09,32;CL:0000213,2.05e-09,58;CL:0000215,2.05e-09,58;CL:0000187,1.84e-08,55;CL:1000306,6.02e-08,4;CL:0002547,6.02e-08,4;CL:0000680,9.13e-08,58;CL:0000056,9.13e-08,58;CL:0000355,9.13e-08,58;CL:0002622,1.66e-07,3;CL:0000393,3.82e-07,61;CL:0000211,3.82e-07,61;CL:0002321,7.15e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000514;3.15e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!8.72e-15!312;UBERON:0000483!2.48e-14!309;UBERON:0000477!6.63e-13!286;UBERON:0004111!2.61e-11!241;UBERON:0003914!3.25e-11!118;UBERON:0000490!3.27e-11!138;UBERON:0002049!5.78e-11!79;UBERON:0007798!5.78e-11!79;UBERON:0000481!1.22e-10!347;UBERON:0001637!1.74e-09!42;UBERON:0003509!1.74e-09!42;UBERON:0004572!1.74e-09!42;UBERON:0000055!3.58e-09!69;UBERON:0005256!7.07e-09!143;UBERON:0000475!8.01e-09!365;UBERON:0001981!8.64e-09!60;UBERON:0007500!8.64e-09!60;UBERON:0004537!8.64e-09!60;UBERON:0006965!8.64e-09!60;UBERON:0000025!1.41e-08!194;UBERON:0001134!4.84e-08!61;UBERON:0002036!4.84e-08!61;UBERON:0003082!4.84e-08!61;UBERON:0004872!7.37e-08!84;UBERON:0002385!2.52e-07!63;UBERON:0001015!2.52e-07!63;UBERON:0000383!2.52e-07!63;UBERON:0004535!4.16e-07!110 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;7.28e-10;42!UBERON:0003509;7.28e-10;42!UBERON:0004572;7.28e-10;42!UBERON:0004797;9.72e-08;4!UBERON:0000415;9.72e-08;4!UBERON:0007240;9.72e-08;4!UBERON:0005742;9.72e-08;4!UBERON:0005734;9.72e-08;4!UBERON:0004664;9.72e-08;4!UBERON:0004663;9.72e-08;4!UBERON:0004573;1.55e-07;33!UBERON:0004571;1.55e-07;33!UBERON:0001264;6.21e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,1.02e-12,42;UBERON:0003509,1.02e-12,42;UBERON:0004572,1.02e-12,42;UBERON:0000055,2.07e-10,68;UBERON:0002049,5.87e-10,78;UBERON:0007798,5.87e-10,78;UBERON:0007500,2.05e-09,59;UBERON:0001981,2.05e-09,59;UBERON:0004537,2.05e-09,59;UBERON:0006965,2.05e-09,59;UBERON:0004573,2.60e-09,33;UBERON:0004571,2.60e-09,33;UBERON:0002100,3.68e-08,199;UBERON:0000415,6.02e-08,4;UBERON:0007240,6.02e-08,4;UBERON:0005742,6.02e-08,4;UBERON:0005734,6.02e-08,4;UBERON:0004664,6.02e-08,4;UBERON:0004663,6.02e-08,4;UBERON:0003914,6.10e-08,117;UBERON:0005256,1.01e-07,122;UBERON:0004122,2.87e-07,15;UBERON:0001134,5.95e-07,62;UBERON:0002036,5.95e-07,62;UBERON:0003082,5.95e-07,62;UBERON:0001264,8.86e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,1.72013755551056,3.48900583986214,0,0,0.247532705920093,0,0,0.602694528023977,0,0,1.47745269692145,0.816002764977012,0.313454721478088,0.286235987131057,0.273748850145768,0.251085279189606,0.305653622991805,0.328402357799783,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0.329851300186716,0.199463657621632,0,0,0,0,0,0,0,0.605399502633369,0,0,0.211255286311942,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0.196709770113833,0,0,0,0,0,0,0.779873198196215,0,0.221533894583621,0.270803863765016,0.25618263945135,0.130059347559878,0.164437904603676,0,0,0,0,0,0.679856056185397,0,0.34362744548263,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,1.0843174571537,2.00535164254356,0.869079113764942,0,0.486634870302636,0.945348171640679,0.443458794925128,0.527008714158756,0.196468613246569,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0.39752481473341,0.860234595106124,0,0,0.838998872419812,0.275118041940067,1.04497483268405,1.8089173141853,1.42306505074684,0.33472061276467,1.20848795132744,0.760272105718513,0.24406205754817,2.20597848207521,0.81014194788176,0.357198913136319,0.22452937262617,0.450445921933289,0,0,0.916008719652036,0,0,0,0,2.15271869829786,1.45650098894541,1.72101972449288,1.41867352879343,0,1.06748995729705,0.98667019366864,0.311211035399766,0.67355336034844,0.163461903113459,0.302714855289863,0,0.468642863667593,0,0,0.149448680551801,0,0,0,0.204154171254893,0.245668634623536,0,1.18800285728205,0.247266929278557,2.73048408581408,0,0.168336113954066,0,0.277064115484183,0.438977620880838,0.612975591598039,0.901428353439581,0.794025282120147,0,0.213557388818567,0.211931901159562,0.300091096084402,0.412210116953756,0,0.558350568994769,0.337552664482532,0.584622030967192,0.252433774244115,0.0920498986422993,1.93975268182574,0,0.10075209822764,1.18692414617341,0,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.337169380156203,0,0,0,0.237270619111097,0,0.196221465125346,0,0,0,1.6462960453256,0,0,0,0,0,0,1.54411029268673,0,0,0.100528972411631,0.462942225792648,0.977424915930974,1.03993478527958,0,0.34779121492523,3.17003474436719,0.144366447761074,0,0.190254152234598,0,0.858486162094873,0,0,0,0,0.16798212819886,0.283550194484773,0,0,0,0,0.088048434013226,0,0,0,0.063497894292169,0,0,0,0,0,0,0.224262168690721,0.87192013766656,0.1466765716419,0.646358578788889,0,0,0.531876233169741,0,1.28603687131071,2.83698264046557,1.8649552531127,0.142977993658148,0,1.64648067356154,0.977208552881205,0.710783897485092,0,1.50719688529793,0,2.29937879718731,0,0,0,0.958499421966331,0,0,0.434343920002738,0.61642896765115,0.358121926479791,0.448340575974109,0.197030760201927,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0.500170521059677,1.08506009479894,0.623912584592421,0.178428988797162,0,0.117141414992713,1.80567659836631,0,0,2.65690239414175,0.553107505625109,1.12948698808508,1.17480694477644,0.686286847621712,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0.462629081407967,0.887808626565635,1.56041596426237,0.519254429183621,1.04589340613963,0.120859449591622,1.60405176242628,0.184161977871793,3.55924789310281,2.91345868810747,3.2781103739856,0.902399225814824,0.385076685522074,1.56869953835371,0,0.105551628892876,0,0.850468526382578,0.431831832204279,0,0.812839312631559,0.501689773854853,1.27438136522519,0,1.34324852833307,0,0,0.769350375349168,1.64007322849853,0.325378394664303,0.103041011647722,0,0.082509499920588,0,0,1.6068392984416,0.096670718292122,0.154048617114644,0.767518373630648,0.137836572484531,0.537101224341368,0.290033387828457,0.340906509664404,2.1367688555217,0.330569830721956,0,0.638063562472921,0.2023155617111,0,0,0.6970372701606,2.7723022215848,1.06461206063404,0,1.48259375283136,1.71749864090389,0,0.316379424718726,0.38126038784765,1.02359116524534,0.855877976067841,1.90921948755562,0.78494864019923,0.719489830333259,0,0.235624804691373,1.81964233415984,1.58510321173008,0,0.48763373908959,0.974853958525138,0,2.45699840534374,1.41405431953713,1.13008116620243,1.65409603063837,1.99031692572366,1.31535265576129,0.578775534266688,1.9676842561399,2.23201414658974,0.6196469961995,2.25356482025793,1.29070216983646,0.785992328104969,2.1400263088875,0.354761064070598,0.844430541190656,1.64647446479951,0.379473173765715,1.04980416073495,0.0962221127255121,0,0,0,1.72202149068492,0,0.443430153536676,0.459446800413919,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0.399158742865633,0,0,0,0,0.456469358066384,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0.556812347790485,0,0,0,0,0,0.293016358543788,0,0,0.284136146806413,0,0,0,1.9882952955326,0.844016498463076,0.779160935160341,0,0,0.19924798825107,0,0,0.102268682502155,0.123084805461069,1.55519793830904,1.16828856491525,0.179021174675609,0,0.0986434056369336,0,3.33410970433911,0,0.278304294485554,0,0,0,0,1.137934482855,1.01701460117107,0,0,0,0,0,0.241192877250816,0,0,0,0.438770794307945,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| |||
|short_description=p@chr15:67360119..67360149,+ | |||
}} |
Latest revision as of 03:36, 25 July 2015
Short description: | p@chr15:67360119..67360149, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:67360119..67360149, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.85e-18 | 121 |
mesothelial cell | 6.32e-16 | 19 |
smooth muscle cell | 7.83e-11 | 43 |
smooth muscle myoblast | 7.83e-11 | 43 |
vascular associated smooth muscle cell | 1.14e-09 | 32 |
lining cell | 2.05e-09 | 58 |
barrier cell | 2.05e-09 | 58 |
muscle cell | 1.84e-08 | 55 |
fibroblast of tunica adventitia of artery | 6.02e-08 | 4 |
fibroblast of the aortic adventitia | 6.02e-08 | 4 |
muscle precursor cell | 9.13e-08 | 58 |
myoblast | 9.13e-08 | 58 |
multi-potent skeletal muscle stem cell | 9.13e-08 | 58 |
prostate stromal cell | 1.66e-07 | 3 |
electrically responsive cell | 3.82e-07 | 61 |
electrically active cell | 3.82e-07 | 61 |
embryonic cell | 7.15e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
artery | 1.02e-12 | 42 |
arterial blood vessel | 1.02e-12 | 42 |
arterial system | 1.02e-12 | 42 |
vessel | 2.07e-10 | 68 |
vasculature | 5.87e-10 | 78 |
vascular system | 5.87e-10 | 78 |
epithelial tube open at both ends | 2.05e-09 | 59 |
blood vessel | 2.05e-09 | 59 |
blood vasculature | 2.05e-09 | 59 |
vascular cord | 2.05e-09 | 59 |
systemic artery | 2.60e-09 | 33 |
systemic arterial system | 2.60e-09 | 33 |
trunk | 3.68e-08 | 199 |
artery wall | 6.02e-08 | 4 |
tunica adventitia of artery | 6.02e-08 | 4 |
adventitia | 6.02e-08 | 4 |
tunica adventitia of blood vessel | 6.02e-08 | 4 |
aorta tunica adventitia | 6.02e-08 | 4 |
aorta wall | 6.02e-08 | 4 |
epithelial tube | 6.10e-08 | 117 |
trunk mesenchyme | 1.01e-07 | 122 |
genitourinary system | 2.87e-07 | 15 |
skeletal muscle tissue | 5.95e-07 | 62 |
striated muscle tissue | 5.95e-07 | 62 |
myotome | 5.95e-07 | 62 |
pancreas | 8.86e-07 | 10 |