FFCP PHASE1:Hg19::chr16:27732649..27732652,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:27732649..27732652,+ | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_at_chr16:27732649..27732652,+ | |description=CAGE_peak_at_chr16:27732649..27732652,+ | ||
|id=chr16:27732649..27732652,+ | |id=chr16:27732649..27732652,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000243;3.58e-07;15!CL:0000125;3.58e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000243,3.58e-07,15;CL:0000125,3.58e-07,15;CL:0000030,3.58e-07,15;CL:0000339,3.58e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0003056;5.96e-34;3!UBERON:0006238;2.37e-10;10!CL:0000339;3.58e-07;15 | |||
|ontology_enrichment_disease=DOID:3093!4.85e-07!11 | |||
|ontology_enrichment_disease_v019=DOID:3093;1.33e-09;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,1.33e-09,11 | |||
|ontology_enrichment_uberon=UBERON:0005743!4.57e-16!86;UBERON:0000955!8.31e-16!69;UBERON:0006238!8.31e-16!69;UBERON:0000966!1.21e-15!5;UBERON:0005388!1.21e-15!5;UBERON:0001802!1.21e-15!5;UBERON:0000073!1.59e-14!94;UBERON:0001016!1.59e-14!94;UBERON:0001017!2.71e-13!82;UBERON:0000153!3.89e-13!129;UBERON:0007811!3.89e-13!129;UBERON:0001894!2.18e-11!7;UBERON:0006222!2.18e-11!7;UBERON:0000033!3.85e-11!123;UBERON:0001905!1.43e-10!2;UBERON:0002757!1.43e-10!2;UBERON:0010134!1.43e-10!2;UBERON:0002784!1.43e-10!2;UBERON:0005408!1.43e-10!2;UBERON:0001899!1.43e-10!2;UBERON:0003056!2.06e-10!61;UBERON:0001897!2.49e-10!2;UBERON:0001871!6.06e-10!7;UBERON:0003075!7.22e-10!86;UBERON:0007284!7.22e-10!86;UBERON:0007023!1.54e-09!115;UBERON:0002346!2.03e-09!90;UBERON:0004121!6.49e-08!169;UBERON:0001049!7.79e-08!57;UBERON:0005068!7.79e-08!57;UBERON:0006241!7.79e-08!57;UBERON:0007135!7.79e-08!57;UBERON:0000924!1.02e-07!173;UBERON:0006601!1.02e-07!173;UBERON:0002616!1.42e-07!59;UBERON:0002771!2.47e-07!3;UBERON:0002780!3.25e-07!41;UBERON:0001890!3.25e-07!41;UBERON:0006240!3.25e-07!41;UBERON:0001896!3.35e-07!3;UBERON:0005290!3.35e-07!3;UBERON:0010096!3.35e-07!3;UBERON:0003080!4.72e-07!42 | |ontology_enrichment_uberon=UBERON:0005743!4.57e-16!86;UBERON:0000955!8.31e-16!69;UBERON:0006238!8.31e-16!69;UBERON:0000966!1.21e-15!5;UBERON:0005388!1.21e-15!5;UBERON:0001802!1.21e-15!5;UBERON:0000073!1.59e-14!94;UBERON:0001016!1.59e-14!94;UBERON:0001017!2.71e-13!82;UBERON:0000153!3.89e-13!129;UBERON:0007811!3.89e-13!129;UBERON:0001894!2.18e-11!7;UBERON:0006222!2.18e-11!7;UBERON:0000033!3.85e-11!123;UBERON:0001905!1.43e-10!2;UBERON:0002757!1.43e-10!2;UBERON:0010134!1.43e-10!2;UBERON:0002784!1.43e-10!2;UBERON:0005408!1.43e-10!2;UBERON:0001899!1.43e-10!2;UBERON:0003056!2.06e-10!61;UBERON:0001897!2.49e-10!2;UBERON:0001871!6.06e-10!7;UBERON:0003075!7.22e-10!86;UBERON:0007284!7.22e-10!86;UBERON:0007023!1.54e-09!115;UBERON:0002346!2.03e-09!90;UBERON:0004121!6.49e-08!169;UBERON:0001049!7.79e-08!57;UBERON:0005068!7.79e-08!57;UBERON:0006241!7.79e-08!57;UBERON:0007135!7.79e-08!57;UBERON:0000924!1.02e-07!173;UBERON:0006601!1.02e-07!173;UBERON:0002616!1.42e-07!59;UBERON:0002771!2.47e-07!3;UBERON:0002780!3.25e-07!41;UBERON:0001890!3.25e-07!41;UBERON:0006240!3.25e-07!41;UBERON:0001896!3.35e-07!3;UBERON:0005290!3.35e-07!3;UBERON:0010096!3.35e-07!3;UBERON:0003080!4.72e-07!42 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;2.74e-50;2!UBERON:0002757;2.74e-50;2!UBERON:0010134;2.74e-50;2!UBERON:0005408;2.74e-50;2!UBERON:0001899;2.74e-50;2!UBERON:0003296;5.56e-26;4!UBERON:0010133;5.56e-26;4!UBERON:0002784;5.56e-26;4!UBERON:0000966;5.15e-21;5!UBERON:0005388;5.15e-21;5!UBERON:0001802;5.15e-21;5!UBERON:0001894;1.65e-15;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,2.74e-50,2;UBERON:0002757,2.74e-50,2;UBERON:0010134,2.74e-50,2;UBERON:0005408,2.74e-50,2;UBERON:0001899,2.74e-50,2;UBERON:0003296,5.56e-26,4;UBERON:0010133,5.56e-26,4;UBERON:0002784,5.56e-26,4;UBERON:0000966,9.07e-18,6;UBERON:0005388,9.07e-18,6;UBERON:0001802,9.07e-18,6;UBERON:0001894,1.65e-15,7;UBERON:0006222,1.65e-15,7;UBERON:0003056,1.20e-07,61;UBERON:0000955,6.59e-07,68;UBERON:0006238,6.59e-07,68 | |||
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|short_description=p@chr16:27732649..27732652,+ | |short_description=p@chr16:27732649..27732652,+ | ||
}} | }} |
Latest revision as of 07:34, 25 July 2015
Short description: | p@chr16:27732649..27732652, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:27732649..27732652, + |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glial cell (sensu Vertebrata) | 3.58e-07 | 15 |
glial cell | 3.58e-07 | 15 |
glioblast | 3.58e-07 | 15 |
glioblast (sensu Vertebrata) | 3.58e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
pineal body | 2.74e-50 | 2 |
regional part of epithalamus | 2.74e-50 | 2 |
secretory circumventricular organ | 2.74e-50 | 2 |
circumventricular organ | 2.74e-50 | 2 |
epithalamus | 2.74e-50 | 2 |
gland of diencephalon | 5.56e-26 | 4 |
neuroendocrine gland | 5.56e-26 | 4 |
regional part of diencephalon | 5.56e-26 | 4 |
retina | 9.07e-18 | 6 |
photoreceptor array | 9.07e-18 | 6 |
posterior segment of eyeball | 9.07e-18 | 6 |
diencephalon | 1.65e-15 | 7 |
future diencephalon | 1.65e-15 | 7 |
pre-chordal neural plate | 1.20e-07 | 61 |
brain | 6.59e-07 | 68 |
future brain | 6.59e-07 | 68 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 1.33e-09 | 11 |